RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 GBA2Q9HCG7 927 aaPredicted RBP14.19□□□□□ -0.14
LINC00339-205ENST00000452322 SERPINB13Q9UIV8 391 aa14.19□□□□□ -0.14
LINC00339-205ENST00000452322 ROBO3Q96MS0 1386 aa14.18□□□□□ -0.14
LINC00339-205ENST00000452322 CYP2D6P10635 497 aa14.18□□□□□ -0.14
LINC00339-205ENST00000452322 GABPAQ06546 454 aa14.18□□□□□ -0.14
LINC00339-205ENST00000452322 MAP3K11Q16584 847 aa14.18□□□□□ -0.14
LINC00339-205ENST00000452322 MIGA2Q7L4E1 593 aa14.18□□□□□ -0.14
LINC00339-205ENST00000452322 CRACR2BQ8N4Y2 399 aaPredicted RBP14.18□□□□□ -0.14
LINC00339-205ENST00000452322 C2orf69Q8N8R5 385 aa14.18□□□□□ -0.14
LINC00339-205ENST00000452322 ZNF341Q9BYN7 854 aa14.18□□□□□ -0.14
LINC00339-205ENST00000452322 ANO2Q9NQ90 1003 aa14.18□□□□□ -0.14
LINC00339-205ENST00000452322 CYP2D7A0A087X1C5 515 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 TMEM88BA6NKF7 163 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 MINDY4BA8MYZ0 360 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 USP2O75604 605 aaPredicted RBP14.17□□□□□ -0.14
LINC00339-205ENST00000452322 IREB2P48200 963 aaKnown RBP14.17□□□□□ -0.14
LINC00339-205ENST00000452322 APLP1P51693 650 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 PTH1RQ03431 593 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 PPARAQ07869 468 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 TTLL12Q14166 644 aaPredicted RBP14.17□□□□□ -0.14
LINC00339-205ENST00000452322 ARMC9Q7Z3E5 817 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 MAP4K1Q92918 833 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 KLRG1Q96E93 195 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 TRIM34Q9BYJ4 488 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 LSG1Q9H089 658 aaKnown RBP14.17□□□□□ -0.14
LINC00339-205ENST00000452322 DNAJC18Q9H819 358 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00339-205ENST00000452322 CTNNA3Q9UI47 895 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 ANGEL1Q9UNK9 670 aaKnown RBP14.17□□□□□ -0.14
LINC00339-205ENST00000452322 LAMA4Q16363 1823 aa14.17□□□□□ -0.14
LINC00339-205ENST00000452322 UNCXA6NJT0 531 aa14.16□□□□□ -0.14
LINC00339-205ENST00000452322 SLURP2P0DP57 97 aa14.16□□□□□ -0.14
LINC00339-205ENST00000452322 EVX2Q03828 476 aa14.16□□□□□ -0.14
LINC00339-205ENST00000452322 PRKG1Q13976 671 aa14.16□□□□□ -0.14
LINC00339-205ENST00000452322 C16orf86Q6ZW13 317 aa14.16□□□□□ -0.14
LINC00339-205ENST00000452322 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.16□□□□□ -0.14
LINC00339-205ENST00000452322 SWAP70Q9UH65 585 aa14.16□□□□□ -0.14
LINC00339-205ENST00000452322 ZNF112Q9UJU3 913 aa14.16□□□□□ -0.14
LINC00339-205ENST00000452322 ANAPC4Q9UJX5 808 aa14.16□□□□□ -0.14
LINC00339-205ENST00000452322 FZD1Q9UP38 647 aa14.16□□□□□ -0.14
LINC00339-205ENST00000452322 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
LINC00339-205ENST00000452322 OTOFQ9HC10 1997 aa14.15□□□□□ -0.14
LINC00339-205ENST00000452322 FAM196BA6NMK8 535 aa14.15□□□□□ -0.14
LINC00339-205ENST00000452322 PHF20L1A8MW92 1017 aa14.15□□□□□ -0.14
LINC00339-205ENST00000452322 EIF5BO60841 1220 aaKnown RBP14.15□□□□□ -0.14
LINC00339-205ENST00000452322 REC8O95072 547 aa14.15□□□□□ -0.14
LINC00339-205ENST00000452322 SLC3A2P08195 630 aaKnown RBP14.15□□□□□ -0.14
LINC00339-205ENST00000452322 C1QTNF8P60827 252 aa14.15□□□□□ -0.14
LINC00339-205ENST00000452322 TATDN1Q6P1N9 297 aa14.15□□□□□ -0.14
LINC00339-205ENST00000452322 DYNLL2Q96FJ2 89 aa14.15□□□□□ -0.14
LINC00339-205ENST00000452322 WRNIP1Q96S55 665 aa14.15□□□□□ -0.14
LINC00339-205ENST00000452322 SMIM22K7EJ46 135 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 ZNF213O14771 459 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 EPB41L2O43491 1005 aaKnown RBP14.14□□□□□ -0.15
LINC00339-205ENST00000452322 SHMT1P34896 483 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 MAP3K9P80192 1104 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 IMMTQ16891 758 aaKnown RBP14.14□□□□□ -0.15
LINC00339-205ENST00000452322 C8orf34Q49A92 452 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 LDLRAD1Q5T700 205 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 MOB2Q70IA6 237 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 SAPCD2Q86UD0 394 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 ANKRD13AQ8IZ07 590 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 ZNF287Q9HBT7 754 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 RBM8AQ9Y5S9 174 aaKnown RBP14.14□□□□□ -0.15
LINC00339-205ENST00000452322 TLL2Q9Y6L7 1015 aa14.14□□□□□ -0.15
LINC00339-205ENST00000452322 UBE2Q2LH0YL09 131 aa14.13□□□□□ -0.15
LINC00339-205ENST00000452322 PCP11498 1178 aaKnown RBP14.13□□□□□ -0.15
LINC00339-205ENST00000452322 CDK8P49336 464 aa14.13□□□□□ -0.15
LINC00339-205ENST00000452322 HUNKP57058 714 aa14.13□□□□□ -0.15
LINC00339-205ENST00000452322 HAND2P61296 217 aa14.13□□□□□ -0.15
LINC00339-205ENST00000452322 PDE4BQ07343 736 aa14.13□□□□□ -0.15
LINC00339-205ENST00000452322 NOL9Q5SY16 702 aaKnown RBP14.13□□□□□ -0.15
LINC00339-205ENST00000452322 SLC44A5Q8NCS7 719 aa14.13□□□□□ -0.15
LINC00339-205ENST00000452322 MYH8P13535 1937 aa14.13□□□□□ -0.15
LINC00339-205ENST00000452322 DOCK1Q14185 1865 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 CTNND1O60716 968 aaKnown RBP14.12□□□□□ -0.15
LINC00339-205ENST00000452322 CYP21A2P08686 494 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 FGRP09769 529 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 INPP5BP32019 993 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 CAP2P40123 477 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 VGLL4Q14135 290 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-205ENST00000452322 STAG1Q8WVM7 1258 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 HHIPL1Q96JK4 782 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 RNF41Q9H4P4 317 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-205ENST00000452322 ABT1Q9ULW3 272 aaKnown RBP14.12□□□□□ -0.15
LINC00339-205ENST00000452322 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.12□□□□□ -0.15
LINC00339-205ENST00000452322 CSADQ9Y600 493 aa14.12□□□□□ -0.15
LINC00339-205ENST00000452322 RRP1BQ14684 758 aaKnown RBP14.11□□□□□ -0.15
LINC00339-205ENST00000452322 NECTIN1Q15223 517 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 CERKLQ49MI3 558 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-205ENST00000452322 AKNAD1Q5T1N1 836 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 TBC1D10CQ8IV04 446 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 SCYL3Q8IZE3 742 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 ZKSCAN4Q969J2 545 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-205ENST00000452322 CCDC17Q96LX7 622 aa14.11□□□□□ -0.15
LINC00339-205ENST00000452322 NBPF3Q9H094 633 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms