RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 PALD1Q9ULE6 856 aa19.54■□□□□ 0.72
SCAMP4-205ENST00000452128 TTC41PQ6P2S7 1318 aa19.53■□□□□ 0.72
SCAMP4-205ENST00000452128 JAG1P78504 1218 aa19.53■□□□□ 0.72
SCAMP4-205ENST00000452128 AFG3L2Q9Y4W6 797 aa19.53■□□□□ 0.72
SCAMP4-205ENST00000452128 MAGEB6P1A0A0J9YX57 407 aa19.52■□□□□ 0.72
SCAMP4-205ENST00000452128 GPR25O00155 361 aa19.52■□□□□ 0.72
SCAMP4-205ENST00000452128 CXCL11O14625 94 aa19.52■□□□□ 0.72
SCAMP4-205ENST00000452128 ANKRD45Q5TZF3 282 aa19.52■□□□□ 0.72
SCAMP4-205ENST00000452128 TNS4Q8IZW8 715 aa19.52■□□□□ 0.72
SCAMP4-205ENST00000452128 FAM43AQ8N2R8 423 aa19.52■□□□□ 0.72
SCAMP4-205ENST00000452128 KBTBD3Q8NAB2 608 aa19.52■□□□□ 0.72
SCAMP4-205ENST00000452128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.52■□□□□ 0.72
SCAMP4-205ENST00000452128 SIPA1L1O43166 1804 aa19.51■□□□□ 0.71
SCAMP4-205ENST00000452128 CCL15-CCL14A0A0B4J2E2 113 aa19.51■□□□□ 0.71
SCAMP4-205ENST00000452128 BTBD19C9JJ37 291 aa19.51■□□□□ 0.71
SCAMP4-205ENST00000452128 CETPP11597 493 aa19.51■□□□□ 0.71
SCAMP4-205ENST00000452128 CAP2P40123 477 aa19.51■□□□□ 0.71
SCAMP4-205ENST00000452128 SNAPC2Q13487 334 aa19.51■□□□□ 0.71
SCAMP4-205ENST00000452128 CCL15Q16663 113 aa19.51■□□□□ 0.71
SCAMP4-205ENST00000452128 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
SCAMP4-205ENST00000452128 CASP8AP2Q9UKL3 1982 aa19.51■□□□□ 0.71
SCAMP4-205ENST00000452128 CDK5RAP2Q96SN8 1893 aa19.5■□□□□ 0.71
SCAMP4-205ENST00000452128 GPAT2Q6NUI2 795 aa19.5■□□□□ 0.71
SCAMP4-205ENST00000452128 ZNF296Q8WUU4 475 aaPredicted RBP19.5■□□□□ 0.71
SCAMP4-205ENST00000452128 RWDD1Q9H446 243 aaPredicted RBP19.5■□□□□ 0.71
SCAMP4-205ENST00000452128 ZCCHC17Q9NP64 241 aaKnown RBP19.5■□□□□ 0.71
SCAMP4-205ENST00000452128 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.5■□□□□ 0.71
SCAMP4-205ENST00000452128 SAP30BPQ9UHR5 308 aaKnown RBP19.5■□□□□ 0.71
SCAMP4-205ENST00000452128 ZHX2Q9Y6X8 837 aa19.5■□□□□ 0.71
SCAMP4-205ENST00000452128 AK9Q5TCS8 1911 aa19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 FOCADQ5VW36 1801 aa19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 GLRX3O76003 335 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 MX1P20591 662 aa19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 PLCD1P51178 756 aa19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 GABPAQ06546 454 aa19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 CRHR2Q13324 411 aa19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 TATDN1Q6P1N9 297 aa19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 GPATCH3Q96I76 525 aa19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 PUS7LQ9H0K6 701 aaKnown RBP19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 EHD4Q9H223 541 aa19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
SCAMP4-205ENST00000452128 PRKAB2O43741 272 aa19.48■□□□□ 0.71
SCAMP4-205ENST00000452128 PDE1AP54750 535 aa19.48■□□□□ 0.71
SCAMP4-205ENST00000452128 CAP1Q01518 475 aa19.48■□□□□ 0.71
SCAMP4-205ENST00000452128 EVX2Q03828 476 aa19.48■□□□□ 0.71
SCAMP4-205ENST00000452128 SHROOM1Q2M3G4 852 aaPredicted RBP19.48■□□□□ 0.71
SCAMP4-205ENST00000452128 OTUD7BQ6GQQ9 843 aa19.48■□□□□ 0.71
SCAMP4-205ENST00000452128 ARMT1Q9H993 441 aa19.48■□□□□ 0.71
SCAMP4-205ENST00000452128 A0A0G2JLL6 359 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 MBD4O95243 580 aa19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 USP5P45974 858 aa19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 NUCB1Q02818 461 aa19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 PRRT2Q7Z6L0 340 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 ANKRD23Q86SG2 305 aa19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 CCDC84Q86UT8 332 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 OSBP2Q969R2 916 aa19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 STRBPQ96SI9 672 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 CRNKL1Q9BZJ0 848 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 PICK1Q9NRD5 415 aa19.47■□□□□ 0.71
SCAMP4-205ENST00000452128 ERC2O15083 957 aa19.46■□□□□ 0.71
SCAMP4-205ENST00000452128 ZSCAN25Q6NSZ9 544 aa19.46■□□□□ 0.71
SCAMP4-205ENST00000452128 SDR42E1Q8WUS8 393 aa19.46■□□□□ 0.71
SCAMP4-205ENST00000452128 RNF113AO15541 343 aaKnown RBP19.45■□□□□ 0.7
SCAMP4-205ENST00000452128 TTC6Q86TZ1 520 aa19.45■□□□□ 0.7
SCAMP4-205ENST00000452128 WDR18Q9BV38 432 aa19.45■□□□□ 0.7
SCAMP4-205ENST00000452128 MCOLN1Q9GZU1 580 aa19.45■□□□□ 0.7
SCAMP4-205ENST00000452128 ATP8A2Q9NTI2 1148 aa19.45■□□□□ 0.7
SCAMP4-205ENST00000452128 GINM1Q9NU53 330 aa19.45■□□□□ 0.7
SCAMP4-205ENST00000452128 SERPINB13Q9UIV8 391 aa19.45■□□□□ 0.7
SCAMP4-205ENST00000452128 ADGRA2Q96PE1 1338 aa19.45■□□□□ 0.7
SCAMP4-205ENST00000452128 SMIM22K7EJ46 135 aa19.44■□□□□ 0.7
SCAMP4-205ENST00000452128 FKTNO75072 461 aa19.44■□□□□ 0.7
SCAMP4-205ENST00000452128 HLA-DOAP06340 250 aa19.44■□□□□ 0.7
SCAMP4-205ENST00000452128 SHMT1P34896 483 aa19.44■□□□□ 0.7
SCAMP4-205ENST00000452128 APPBP2Q92624 585 aa19.44■□□□□ 0.7
SCAMP4-205ENST00000452128 LNPKQ9C0E8 428 aa19.44■□□□□ 0.7
SCAMP4-205ENST00000452128 PHIPQ8WWQ0 1821 aa19.44■□□□□ 0.7
SCAMP4-205ENST00000452128 DDX60LQ5H9U9 1706 aaKnown RBP19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 ZFYP08048 801 aaPredicted RBP19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 CYP2D6P10635 497 aa19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 IRX6P78412 446 aaPredicted RBP19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 SLC4A8Q2Y0W8 1093 aa19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 SH3D19Q5HYK7 790 aa19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 CHD1LQ86WJ1 897 aa19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 PLEKHM2Q8IWE5 1019 aa19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 OSBPL3Q9H4L5 887 aa19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 MCM9Q9NXL9 1143 aa19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 TAOK2Q9UL54 1235 aa19.43■□□□□ 0.7
SCAMP4-205ENST00000452128 USP17L5A8MUK1 530 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 GSG1L2A8MUP6 293 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 TLR2O60603 784 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 GUCY1A2P33402 732 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 SPP2Q13103 211 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 TAF1CQ15572 869 aaPredicted RBP19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 C12orf60Q5U649 245 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 C17orf99Q6UX52 265 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 CTU1Q7Z7A3 348 aaKnown RBP19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 ZNF280CQ8ND82 737 aa19.42■□□□□ 0.7
SCAMP4-205ENST00000452128 TBC1D2Q9BYX2 928 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms