RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 LACTBP83111 547 aaPredicted RBP15.24■□□□□ 0.03
CPSF4-208ENST00000452047 PDE3AQ14432 1141 aa15.24■□□□□ 0.03
CPSF4-208ENST00000452047 C17orf99Q6UX52 265 aa15.24■□□□□ 0.03
CPSF4-208ENST00000452047 KIF1BPQ96EK5 621 aa15.24■□□□□ 0.03
CPSF4-208ENST00000452047 ANTXR1Q9H6X2 564 aa15.24■□□□□ 0.03
CPSF4-208ENST00000452047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.24■□□□□ 0.036e-7■■□□□ 14.2
CPSF4-208ENST00000452047 DDX60LQ5H9U9 1706 aaKnown RBP15.23■□□□□ 0.03
CPSF4-208ENST00000452047 IDH1O75874 414 aaKnown RBP15.23■□□□□ 0.03
CPSF4-208ENST00000452047 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
CPSF4-208ENST00000452047 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
CPSF4-208ENST00000452047 ARHGAP39Q9C0H5 1083 aa15.23■□□□□ 0.03
CPSF4-208ENST00000452047 DHX36Q9H2U1 1008 aaKnown RBP15.23■□□□□ 0.03
CPSF4-208ENST00000452047 HERC5Q9UII4 1024 aaKnown RBP15.23■□□□□ 0.03
CPSF4-208ENST00000452047 PDE4DIPQ5VU43 2346 aa15.23■□□□□ 0.03
CPSF4-208ENST00000452047 MYH1P12882 1939 aa15.23■□□□□ 0.03
CPSF4-208ENST00000452047 CYP7A1P22680 504 aa15.22■□□□□ 0.03
CPSF4-208ENST00000452047 DYNLL1P63167 89 aaKnown RBP15.22■□□□□ 0.03
CPSF4-208ENST00000452047 FASTKD5Q7L8L6 764 aaKnown RBP15.22■□□□□ 0.03
CPSF4-208ENST00000452047 CCDC84Q86UT8 332 aaPredicted RBP15.22■□□□□ 0.03
CPSF4-208ENST00000452047 METTL16Q86W50 562 aaKnown RBP15.22■□□□□ 0.03
CPSF4-208ENST00000452047 MAPKAPK5Q8IW41 473 aa15.22■□□□□ 0.03
CPSF4-208ENST00000452047 CLASRPQ8N2M8 674 aaKnown RBP15.22■□□□□ 0.03
CPSF4-208ENST00000452047 ARMC5Q96C12 935 aa15.22■□□□□ 0.03
CPSF4-208ENST00000452047 CHMP4BQ9H444 224 aaKnown RBP15.22■□□□□ 0.03
CPSF4-208ENST00000452047 PI4KBQ9UBF8 816 aa15.22■□□□□ 0.03
CPSF4-208ENST00000452047 CPA4Q9UI42 421 aa15.22■□□□□ 0.03
CPSF4-208ENST00000452047 MGAMO43451 1857 aa15.22■□□□□ 0.03
CPSF4-208ENST00000452047 TRIM75PA6NK02 468 aa15.21■□□□□ 0.03
CPSF4-208ENST00000452047 APBB1O00213 710 aa15.21■□□□□ 0.03
CPSF4-208ENST00000452047 CTGFP29279 349 aa15.21■□□□□ 0.03
CPSF4-208ENST00000452047 CAP2P40123 477 aa15.21■□□□□ 0.03
CPSF4-208ENST00000452047 ARHGEF6Q15052 776 aa15.21■□□□□ 0.03
CPSF4-208ENST00000452047 TMED8Q6PL24 325 aaPredicted RBP15.21■□□□□ 0.03
CPSF4-208ENST00000452047 MAGEB6Q8N7X4 407 aa15.21■□□□□ 0.03
CPSF4-208ENST00000452047 PARK7Q99497 189 aaKnown RBP15.21■□□□□ 0.03
CPSF4-208ENST00000452047 DNAJC18Q9H819 358 aa15.21■□□□□ 0.03
CPSF4-208ENST00000452047 PTCH2Q9Y6C5 1203 aa15.21■□□□□ 0.03
CPSF4-208ENST00000452047 KIAA0100Q14667 2235 aaKnown RBP15.2■□□□□ 0.02
CPSF4-208ENST00000452047 RAB11FIP3O75154 756 aa15.2■□□□□ 0.02
CPSF4-208ENST00000452047 CYP2C8P10632 490 aa15.2■□□□□ 0.02
CPSF4-208ENST00000452047 BCRP11274 1271 aa15.2■□□□□ 0.02
CPSF4-208ENST00000452047 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
CPSF4-208ENST00000452047 MIGA1Q8NAN2 632 aa15.2■□□□□ 0.02
CPSF4-208ENST00000452047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.2■□□□□ 0.02
CPSF4-208ENST00000452047 SLC45A1Q9Y2W3 748 aa15.2■□□□□ 0.02
CPSF4-208ENST00000452047 NAV1Q8NEY1 1877 aa15.19■□□□□ 0.02
CPSF4-208ENST00000452047 GNRH1P01148 92 aa15.19■□□□□ 0.02
CPSF4-208ENST00000452047 KIF22Q14807 665 aa15.19■□□□□ 0.02
CPSF4-208ENST00000452047 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
CPSF4-208ENST00000452047 CERS3Q8IU89 383 aa15.19■□□□□ 0.02
CPSF4-208ENST00000452047 TRIM47Q96LD4 638 aa15.19■□□□□ 0.02
CPSF4-208ENST00000452047 PALD1Q9ULE6 856 aa15.19■□□□□ 0.02
CPSF4-208ENST00000452047 POTEFA5A3E0 1075 aa15.18■□□□□ 0.02
CPSF4-208ENST00000452047 IFIT2P09913 472 aaKnown RBP15.18■□□□□ 0.02
CPSF4-208ENST00000452047 TTF1Q15361 905 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-208ENST00000452047 PROCA1Q8NCQ7 364 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-208ENST00000452047 ZNF280CQ8ND82 737 aa15.18■□□□□ 0.02
CPSF4-208ENST00000452047 ZNF333Q96JL9 665 aa15.18■□□□□ 0.02
CPSF4-208ENST00000452047 RIOK1Q9BRS2 568 aaKnown RBP15.18■□□□□ 0.02
CPSF4-208ENST00000452047 TBC1D2Q9BYX2 928 aa15.18■□□□□ 0.02
CPSF4-208ENST00000452047 SAP30BPQ9UHR5 308 aaKnown RBP15.18■□□□□ 0.02
CPSF4-208ENST00000452047 AGTPBP1Q9UPW5 1226 aa15.18■□□□□ 0.02
CPSF4-208ENST00000452047 MYH7P12883 1935 aa15.17■□□□□ 0.02
CPSF4-208ENST00000452047 USP17L5A8MUK1 530 aa15.17■□□□□ 0.02
CPSF4-208ENST00000452047 PDE6AP16499 860 aa15.17■□□□□ 0.02
CPSF4-208ENST00000452047 PSMC4P43686 418 aa15.17■□□□□ 0.02
CPSF4-208ENST00000452047 JAG1P78504 1218 aa15.17■□□□□ 0.02
CPSF4-208ENST00000452047 SPP2Q13103 211 aa15.17■□□□□ 0.02
CPSF4-208ENST00000452047 SHROOM1Q2M3G4 852 aaPredicted RBP15.17■□□□□ 0.02
CPSF4-208ENST00000452047 SLC9C1Q4G0N8 1177 aa15.17■□□□□ 0.02
CPSF4-208ENST00000452047 TREML2Q5T2D2 321 aa15.17■□□□□ 0.02
CPSF4-208ENST00000452047 FOXP4Q8IVH2 680 aaPredicted RBP15.17■□□□□ 0.02
CPSF4-208ENST00000452047 GOLIM4O00461 696 aa15.16■□□□□ 0.02
CPSF4-208ENST00000452047 SLC34A2O95436 690 aa15.16■□□□□ 0.02
CPSF4-208ENST00000452047 ASNSP08243 561 aa15.16■□□□□ 0.02
CPSF4-208ENST00000452047 PRMT2P55345 433 aa15.16■□□□□ 0.02
CPSF4-208ENST00000452047 SH3D19Q5HYK7 790 aa15.16■□□□□ 0.02
CPSF4-208ENST00000452047 CRACR2BQ8N4Y2 399 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-208ENST00000452047 EDC3Q96F86 508 aaKnown RBP15.16■□□□□ 0.02
CPSF4-208ENST00000452047 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
CPSF4-208ENST00000452047 WDR18Q9BV38 432 aa15.16■□□□□ 0.02
CPSF4-208ENST00000452047 SRRDQ9UH36 339 aa15.16■□□□□ 0.02
CPSF4-208ENST00000452047 TCRBV5S4A2TA0A5A2 114 aa15.15■□□□□ 0.02
CPSF4-208ENST00000452047 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
CPSF4-208ENST00000452047 HLA-DOAP06340 250 aa15.15■□□□□ 0.02
CPSF4-208ENST00000452047 ATP5JP18859 108 aa15.15■□□□□ 0.02
CPSF4-208ENST00000452047 OSBPP22059 807 aa15.15■□□□□ 0.02
CPSF4-208ENST00000452047 USP5P45974 858 aa15.15■□□□□ 0.02
CPSF4-208ENST00000452047 HMGCS2P54868 508 aa15.15■□□□□ 0.02
CPSF4-208ENST00000452047 SLC4A8Q2Y0W8 1093 aa15.15■□□□□ 0.02
CPSF4-208ENST00000452047 SLC9C2Q5TAH2 1124 aa15.15■□□□□ 0.02
CPSF4-208ENST00000452047 EHD4Q9H223 541 aa15.15■□□□□ 0.02
CPSF4-208ENST00000452047 GDF11O95390 407 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 TATDN1Q6P1N9 297 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 NBPF11Q86T75 865 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 SMCR8Q8TEV9 937 aaPredicted RBP15.14■□□□□ 0.01
CPSF4-208ENST00000452047 SH3TC2Q8TF17 1288 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 LRRCC1Q9C099 1032 aa15.14■□□□□ 0.01
CPSF4-208ENST00000452047 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms