RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 HSPA1BP0DMV9 641 aaKnown RBP10.66□□□□□ -0.7
COL8A1-203ENST00000452013 INPP5BP32019 993 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
COL8A1-203ENST00000452013 SLFNL1Q499Z3 407 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 NOL9Q5SY16 702 aaKnown RBP10.66□□□□□ -0.7
COL8A1-203ENST00000452013 OTUD7BQ6GQQ9 843 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 GIMAP6Q6P9H5 292 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 METTL16Q86W50 562 aaKnown RBP10.66□□□□□ -0.7
COL8A1-203ENST00000452013 SCYL3Q8IZE3 742 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 OSBP2Q969R2 916 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 ZIC5Q96T25 663 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 DCP1AQ9NPI6 582 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-203ENST00000452013 HELLSQ9NRZ9 838 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 GINM1Q9NU53 330 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 PPP4R2Q9NY27 417 aa10.66□□□□□ -0.7
COL8A1-203ENST00000452013 COL2A1P02458 1487 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-203ENST00000452013 HIP1O00291 1037 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 PRKAB2O43741 272 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 ALDH1A1P00352 501 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 CHGBP05060 677 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 APPP05067 770 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 PDE4AP27815 886 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 GTF2A2P52657 109 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 SDR42E1Q8WUS8 393 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 NACAP1Q9BZK3 213 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 EHD4Q9H223 541 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 SERPINB13Q9UIV8 391 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 SNCAIPQ9Y6H5 919 aa10.65□□□□□ -0.7
COL8A1-203ENST00000452013 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.71
COL8A1-203ENST00000452013 CXCL11O14625 94 aa10.64□□□□□ -0.71
COL8A1-203ENST00000452013 GPAA1O43292 621 aa10.64□□□□□ -0.71
COL8A1-203ENST00000452013 CAP2P40123 477 aa10.64□□□□□ -0.71
COL8A1-203ENST00000452013 CTCFP49711 727 aaPredicted RBP10.64□□□□□ -0.71
COL8A1-203ENST00000452013 PPIL2Q13356 520 aa10.64□□□□□ -0.71
COL8A1-203ENST00000452013 SNAPC2Q13487 334 aa10.64□□□□□ -0.71
COL8A1-203ENST00000452013 MCMDC2Q4G0Z9 681 aa10.64□□□□□ -0.71
COL8A1-203ENST00000452013 TBC1D2Q9BYX2 928 aa10.64□□□□□ -0.71
COL8A1-203ENST00000452013 ZHX2Q9Y6X8 837 aa10.64□□□□□ -0.71
COL8A1-203ENST00000452013 TESPA1A2RU30 521 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-203ENST00000452013 FAM196BA6NMK8 535 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 GSG1L2A8MUP6 293 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 USP17L12C9JPN9 530 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 USP17L21D6R901 530 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 ASNSP08243 561 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 SLURP2P0DP57 97 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 CETPP11597 493 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 PTPRAP18433 802 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 SDSP20132 328 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 GJA5P36382 358 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 PLCD1P51178 756 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
COL8A1-203ENST00000452013 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 C12orf60Q5U649 245 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 TATDN1Q6P1N9 297 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 SEC62Q99442 399 aaKnown RBP10.63□□□□□ -0.71
COL8A1-203ENST00000452013 AS3MTQ9HBK9 375 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 CABP5Q9NP86 173 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 RNF186Q9NXI6 227 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 SAGE1Q9NXZ1 904 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 ARPP21Q9UBL0 812 aaPredicted RBP10.63□□□□□ -0.71
COL8A1-203ENST00000452013 SWAP70Q9UH65 585 aa10.63□□□□□ -0.71
COL8A1-203ENST00000452013 CCL15-CCL14A0A0B4J2E2 113 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 USP17L5A8MUK1 530 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 M0R2C6 588 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 IRF6O14896 467 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 FOXN1O15353 648 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 TRPA1O75762 1119 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 TDO2P48775 406 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 CCL15Q16663 113 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 CERKLQ49MI3 558 aaPredicted RBP10.62□□□□□ -0.71
COL8A1-203ENST00000452013 SBK1Q52WX2 424 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 TTC22Q5TAA0 569 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 CTR9Q6PD62 1173 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 IFNL1Q8IU54 200 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 IFNL3Q8IZI9 196 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 CNKSR2Q8WXI2 1034 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 MS4A4AQ96JQ5 239 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 ZNF287Q9HBT7 754 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 DIAPH3Q9NSV4 1193 aa10.62□□□□□ -0.71
COL8A1-203ENST00000452013 MINDY4BA8MYZ0 360 aa10.61□□□□□ -0.71
COL8A1-203ENST00000452013 SLC3A2P08195 630 aaKnown RBP10.61□□□□□ -0.71
COL8A1-203ENST00000452013 GABPAQ06546 454 aa10.61□□□□□ -0.71
COL8A1-203ENST00000452013 NMIQ13287 307 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-203ENST00000452013 ABCB5Q2M3G0 1257 aa10.61□□□□□ -0.71
COL8A1-203ENST00000452013 FASTKD5Q7L8L6 764 aaKnown RBP10.61□□□□□ -0.71
COL8A1-203ENST00000452013 CCDC17Q96LX7 622 aa10.61□□□□□ -0.71
COL8A1-203ENST00000452013 NAPBQ9H115 298 aa10.61□□□□□ -0.71
COL8A1-203ENST00000452013 KCNH4Q9UQ05 1017 aa10.61□□□□□ -0.71
COL8A1-203ENST00000452013 AFG3L2Q9Y4W6 797 aa10.61□□□□□ -0.71
COL8A1-203ENST00000452013 CYP2D6P10635 497 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 SPP2Q13103 211 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 RRP1BQ14684 758 aaKnown RBP10.6□□□□□ -0.71
COL8A1-203ENST00000452013 ZNF280CQ8ND82 737 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 RUFY2Q8WXA3 655 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 BRI3BPQ8WY22 251 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 FAM227BQ96M60 508 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 WDR18Q9BV38 432 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms