RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 ATAD5Q96QE3 1844 aa28.73■■■□□ 2.19
CPSF4-207ENST00000451876 APLP1P51693 650 aa28.72■■■□□ 2.19
CPSF4-207ENST00000451876 MAP3K10Q02779 954 aa28.72■■■□□ 2.19
CPSF4-207ENST00000451876 TTLL12Q14166 644 aaPredicted RBP28.72■■■□□ 2.19
CPSF4-207ENST00000451876 SBK1Q52WX2 424 aa28.72■■■□□ 2.19
CPSF4-207ENST00000451876 EHD4Q9H223 541 aa28.72■■■□□ 2.19
CPSF4-207ENST00000451876 ANGEL1Q9UNK9 670 aaKnown RBP28.72■■■□□ 2.19
CPSF4-207ENST00000451876 PPP1R12BO60237 982 aaPredicted RBP28.72■■■□□ 2.19
CPSF4-207ENST00000451876 ALX1Q15699 326 aa28.72■■■□□ 2.19
CPSF4-207ENST00000451876 DCAF15Q66K64 600 aa28.72■■■□□ 2.19
CPSF4-207ENST00000451876 METTL16Q86W50 562 aaKnown RBP28.72■■■□□ 2.19
CPSF4-207ENST00000451876 SERPINB13Q9UIV8 391 aa28.72■■■□□ 2.19
CPSF4-207ENST00000451876 ZMYM6O95789 1325 aa28.71■■■□□ 2.19
CPSF4-207ENST00000451876 TMEM88BA6NKF7 163 aa28.71■■■□□ 2.19
CPSF4-207ENST00000451876 MINDY4BA8MYZ0 360 aa28.71■■■□□ 2.19
CPSF4-207ENST00000451876 AMOTL1Q8IY63 956 aa28.71■■■□□ 2.19
CPSF4-207ENST00000451876 CRACR2BQ8N4Y2 399 aaPredicted RBP28.71■■■□□ 2.19
CPSF4-207ENST00000451876 C2orf69Q8N8R5 385 aa28.71■■■□□ 2.19
CPSF4-207ENST00000451876 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.71■■■□□ 2.196e-7■■□□□ 14.2
CPSF4-207ENST00000451876 TBC1D12O60347 775 aa28.7■■■□□ 2.19
CPSF4-207ENST00000451876 GABPAQ06546 454 aa28.7■■■□□ 2.19
CPSF4-207ENST00000451876 FOXP4Q8IVH2 680 aaPredicted RBP28.7■■■□□ 2.19
CPSF4-207ENST00000451876 KLRG1Q96E93 195 aa28.7■■■□□ 2.19
CPSF4-207ENST00000451876 DYNLL2Q96FJ2 89 aa28.7■■■□□ 2.19
CPSF4-207ENST00000451876 ZNF341Q9BYN7 854 aa28.7■■■□□ 2.19
CPSF4-207ENST00000451876 HERC5Q9UII4 1024 aaKnown RBP28.7■■■□□ 2.19
CPSF4-207ENST00000451876 DOCK1Q14185 1865 aa28.69■■■□□ 2.18
CPSF4-207ENST00000451876 UBE2Q2LH0YL09 131 aa28.69■■■□□ 2.18
CPSF4-207ENST00000451876 MAP3K11Q16584 847 aa28.69■■■□□ 2.18
CPSF4-207ENST00000451876 SLC44A5Q8NCS7 719 aa28.69■■■□□ 2.18
CPSF4-207ENST00000451876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.69■■■□□ 2.186e-7■■■■□ 23.4
CPSF4-207ENST00000451876 LSG1Q9H089 658 aaKnown RBP28.69■■■□□ 2.18
CPSF4-207ENST00000451876 ROBO3Q96MS0 1386 aa28.69■■■□□ 2.18
CPSF4-207ENST00000451876 FKBP1BP68106 108 aa28.69■■■□□ 2.18
CPSF4-207ENST00000451876 WRNIP1Q96S55 665 aa28.69■■■□□ 2.18
CPSF4-207ENST00000451876 ANO2Q9NQ90 1003 aa28.69■■■□□ 2.18
CPSF4-207ENST00000451876 PHF20L1A8MW92 1017 aa28.68■■■□□ 2.18
CPSF4-207ENST00000451876 PPARAQ07869 468 aa28.68■■■□□ 2.18
CPSF4-207ENST00000451876 ARMC9Q7Z3E5 817 aa28.68■■■□□ 2.18
CPSF4-207ENST00000451876 SAPCD2Q86UD0 394 aa28.68■■■□□ 2.18
CPSF4-207ENST00000451876 STK11IPQ8N1F8 1099 aa28.68■■■□□ 2.18
CPSF4-207ENST00000451876 INPP5BP32019 993 aa28.67■■■□□ 2.18
CPSF4-207ENST00000451876 RRP1BQ14684 758 aaKnown RBP28.67■■■□□ 2.18
CPSF4-207ENST00000451876 TLL2Q9Y6L7 1015 aa28.67■■■□□ 2.18
CPSF4-207ENST00000451876 SHMT1P34896 483 aa28.66■■■□□ 2.18
CPSF4-207ENST00000451876 IREB2P48200 963 aaKnown RBP28.66■■■□□ 2.18
CPSF4-207ENST00000451876 HAND2P61296 217 aa28.66■■■□□ 2.18
CPSF4-207ENST00000451876 KIAA1211Q6ZU35 1233 aa28.66■■■□□ 2.18
CPSF4-207ENST00000451876 MAP4K1Q92918 833 aa28.66■■■□□ 2.18
CPSF4-207ENST00000451876 TRIM34Q9BYJ4 488 aa28.66■■■□□ 2.18
CPSF4-207ENST00000451876 CREBZFQ9NS37 354 aa28.66■■■□□ 2.18
CPSF4-207ENST00000451876 ZNF112Q9UJU3 913 aa28.66■■■□□ 2.18
CPSF4-207ENST00000451876 HUNKP57058 714 aa28.65■■■□□ 2.18
CPSF4-207ENST00000451876 HTRA3P83110 453 aa28.65■■■□□ 2.18
CPSF4-207ENST00000451876 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.65■■■□□ 2.18
CPSF4-207ENST00000451876 ZKSCAN4Q969J2 545 aaPredicted RBP28.65■■■□□ 2.18
CPSF4-207ENST00000451876 ABT1Q9ULW3 272 aaKnown RBP28.65■■■□□ 2.18
CPSF4-207ENST00000451876 CTDSPL2Q05D32 466 aa28.65■■■□□ 2.18
CPSF4-207ENST00000451876 LDLRAD1Q5T700 205 aa28.65■■■□□ 2.18
CPSF4-207ENST00000451876 C16orf86Q6ZW13 317 aa28.65■■■□□ 2.18
CPSF4-207ENST00000451876 CLMNQ96JQ2 1002 aa28.65■■■□□ 2.18
CPSF4-207ENST00000451876 NBPF3Q9H094 633 aa28.65■■■□□ 2.18
CPSF4-207ENST00000451876 TATDN1Q6P1N9 297 aa28.64■■■□□ 2.18
CPSF4-207ENST00000451876 CDK8P49336 464 aa28.63■■■□□ 2.17
CPSF4-207ENST00000451876 VGLL4Q14135 290 aa28.63■■■□□ 2.17
CPSF4-207ENST00000451876 SHROOM1Q2M3G4 852 aaPredicted RBP28.63■■■□□ 2.17
CPSF4-207ENST00000451876 ANAPC4Q9UJX5 808 aa28.63■■■□□ 2.17
CPSF4-207ENST00000451876 RBM8AQ9Y5S9 174 aaKnown RBP28.63■■■□□ 2.17
CPSF4-207ENST00000451876 TACC3Q9Y6A5 838 aa28.63■■■□□ 2.17
CPSF4-207ENST00000451876 HSPA6P17066 643 aa28.62■■■□□ 2.17
CPSF4-207ENST00000451876 MAP3K9P80192 1104 aa28.62■■■□□ 2.17
CPSF4-207ENST00000451876 C8orf34Q49A92 452 aa28.62■■■□□ 2.17
CPSF4-207ENST00000451876 ANKRD13AQ8IZ07 590 aa28.62■■■□□ 2.17
CPSF4-207ENST00000451876 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.62■■■□□ 2.17
CPSF4-207ENST00000451876 SWAP70Q9UH65 585 aa28.62■■■□□ 2.17
CPSF4-207ENST00000451876 JAG1P78504 1218 aa28.61■■■□□ 2.17
CPSF4-207ENST00000451876 INCENPQ9NQS7 918 aa28.61■■■□□ 2.17
CPSF4-207ENST00000451876 U3KPZ7 1027 aaPredicted RBP28.61■■■□□ 2.17
CPSF4-207ENST00000451876 PHIPQ8WWQ0 1821 aa28.61■■■□□ 2.17
CPSF4-207ENST00000451876 GDF11O95390 407 aa28.61■■■□□ 2.17
CPSF4-207ENST00000451876 TBC1D10CQ8IV04 446 aa28.61■■■□□ 2.17
CPSF4-207ENST00000451876 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.61■■■□□ 2.17
CPSF4-207ENST00000451876 CTNNA3Q9UI47 895 aa28.61■■■□□ 2.17
CPSF4-207ENST00000451876 SNCAIPQ9Y6H5 919 aa28.61■■■□□ 2.17
CPSF4-207ENST00000451876 CEP350Q5VT06 3117 aa28.6■■■□□ 2.17
CPSF4-207ENST00000451876 ZNF213O14771 459 aa28.6■■■□□ 2.17
CPSF4-207ENST00000451876 PRDM1O75626 825 aa28.6■■■□□ 2.17
CPSF4-207ENST00000451876 CAP2P40123 477 aa28.6■■■□□ 2.17
CPSF4-207ENST00000451876 GREB1LQ9C091 1923 aaPredicted RBP28.59■■■□□ 2.17
CPSF4-207ENST00000451876 CYP21A2P08686 494 aa28.59■■■□□ 2.17
CPSF4-207ENST00000451876 IMMTQ16891 758 aaKnown RBP28.59■■■□□ 2.17
CPSF4-207ENST00000451876 CTNND1O60716 968 aaKnown RBP28.58■■■□□ 2.17
CPSF4-207ENST00000451876 CERKLQ49MI3 558 aaPredicted RBP28.58■■■□□ 2.17
CPSF4-207ENST00000451876 SCYL3Q8IZE3 742 aa28.58■■■□□ 2.17
CPSF4-207ENST00000451876 ELP3Q9H9T3 547 aa28.58■■■□□ 2.17
CPSF4-207ENST00000451876 TAOK2Q9UL54 1235 aa28.58■■■□□ 2.17
CPSF4-207ENST00000451876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.58■■■□□ 2.17
CPSF4-207ENST00000451876 CSADQ9Y600 493 aa28.58■■■□□ 2.17
CPSF4-207ENST00000451876 TAF6LQ9Y6J9 622 aa28.58■■■□□ 2.17
CPSF4-207ENST00000451876 REC8O95072 547 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms