RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 ZDHHC13Q8IUH4 622 aa8.66□□□□□ -1.02
LINC00458-203ENST00000451744 TRIM42Q8IWZ5 723 aa8.66□□□□□ -1.02
LINC00458-203ENST00000451744 KLHL23Q8NBE8 558 aa8.66□□□□□ -1.02
LINC00458-203ENST00000451744 FOXD4L4Q8WXT5 416 aaPredicted RBP8.66□□□□□ -1.02
LINC00458-203ENST00000451744 FAM46AQ96IP4 442 aaKnown RBP8.66□□□□□ -1.02
LINC00458-203ENST00000451744 ITSN1Q15811 1721 aa8.66□□□□□ -1.02
LINC00458-203ENST00000451744 RALGAPBQ86X10 1494 aa8.65□□□□□ -1.02
LINC00458-203ENST00000451744 HMX2A2RU54 273 aa8.65□□□□□ -1.02
LINC00458-203ENST00000451744 ADAM11O75078 769 aa8.65□□□□□ -1.02
LINC00458-203ENST00000451744 IRAK1P51617 712 aa8.65□□□□□ -1.02
LINC00458-203ENST00000451744 TMEM164Q5U3C3 297 aa8.65□□□□□ -1.02
LINC00458-203ENST00000451744 CEP120Q8N960 986 aa8.65□□□□□ -1.02
LINC00458-203ENST00000451744 KLHDC7BQ96G42 594 aa8.65□□□□□ -1.02
LINC00458-203ENST00000451744 MTMR7Q9Y216 660 aa8.65□□□□□ -1.02
LINC00458-203ENST00000451744 OAS3Q9Y6K5 1087 aaKnown RBP8.65□□□□□ -1.02
LINC00458-203ENST00000451744 ATP7BP35670 1465 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 MARF1Q9Y4F3 1742 aaKnown RBP8.64□□□□□ -1.03
LINC00458-203ENST00000451744 PAX4O43316 350 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 PTPRAP18433 802 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 ABTB2Q8N961 1025 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 MYRFLQ96LU7 910 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 POP1Q99575 1024 aaKnown RBP8.64□□□□□ -1.03
LINC00458-203ENST00000451744 SEC31BQ9NQW1 1179 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 TMEM63CQ9P1W3 806 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 POGKQ9P215 609 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 KANSL3Q9P2N6 904 aa8.64□□□□□ -1.03
LINC00458-203ENST00000451744 RGS17Q9UGC6 210 aaPredicted RBP8.64□□□□□ -1.03
LINC00458-203ENST00000451744 CRYBG1Q9Y4K1 1723 aa8.63□□□□□ -1.03
LINC00458-203ENST00000451744 PNPLA6Q8IY17 1366 aa8.63□□□□□ -1.03
LINC00458-203ENST00000451744 TONSLQ96HA7 1378 aa8.63□□□□□ -1.03
LINC00458-203ENST00000451744 JCADQ9P266 1359 aa8.63□□□□□ -1.03
LINC00458-203ENST00000451744 ALS2Q96Q42 1657 aa8.63□□□□□ -1.03
LINC00458-203ENST00000451744 COL22A1Q8NFW1 1626 aaPredicted RBP8.63□□□□□ -1.03
LINC00458-203ENST00000451744 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
LINC00458-203ENST00000451744 FAM177BA6PVY3 158 aa8.63□□□□□ -1.03
LINC00458-203ENST00000451744 GP2P55259 537 aaKnown RBP8.63□□□□□ -1.03
LINC00458-203ENST00000451744 RNF43Q68DV7 783 aa8.63□□□□□ -1.03
LINC00458-203ENST00000451744 NUDT16Q96DE0 195 aaKnown RBP8.63□□□□□ -1.03
LINC00458-203ENST00000451744 ELP3Q9H9T3 547 aa8.63□□□□□ -1.03
LINC00458-203ENST00000451744 ROCK2O75116 1388 aaKnown RBP8.62□□□□□ -1.03
LINC00458-203ENST00000451744 ATCAYQ86WG3 371 aa8.62□□□□□ -1.03
LINC00458-203ENST00000451744 DBNDD2Q9BQY9 259 aa8.62□□□□□ -1.03
LINC00458-203ENST00000451744 ADAM19Q9H013 955 aa8.62□□□□□ -1.03
LINC00458-203ENST00000451744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.62□□□□□ -1.03
LINC00458-203ENST00000451744 H3BRJ5 948 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 ADAMTS4O75173 837 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 ACPPP15309 386 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 GRIK1P39086 918 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 PDE12Q6L8Q7 609 aaKnown RBP8.61□□□□□ -1.03
LINC00458-203ENST00000451744 ZNF438Q7Z4V0 828 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 PMFBP1Q8TBY8 1022 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 CLP1Q92989 425 aaKnown RBP8.61□□□□□ -1.03
LINC00458-203ENST00000451744 CNTN3Q9P232 1028 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 ANKARQ7Z5J8 1434 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 AKAP12Q02952 1782 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
LINC00458-203ENST00000451744 PRR19A6NJB7 356 aa8.6□□□□□ -1.03
LINC00458-203ENST00000451744 TMEM88BA6NKF7 163 aa8.6□□□□□ -1.03
LINC00458-203ENST00000451744 SART1O43290 800 aaKnown RBP8.6□□□□□ -1.03
LINC00458-203ENST00000451744 SPINK2P20155 84 aa8.6□□□□□ -1.03
LINC00458-203ENST00000451744 FAM20CQ8IXL6 584 aa8.6□□□□□ -1.03
LINC00458-203ENST00000451744 KCNF1Q9H3M0 494 aa8.6□□□□□ -1.03
LINC00458-203ENST00000451744 SEPT3Q9UH03 358 aa8.6□□□□□ -1.03
LINC00458-203ENST00000451744 CENPJQ9HC77 1338 aaPredicted RBP8.59□□□□□ -1.03
LINC00458-203ENST00000451744 PHRF1Q9P1Y6 1649 aaKnown RBP8.59□□□□□ -1.03
LINC00458-203ENST00000451744 BMP3P12645 472 aa8.59□□□□□ -1.03
LINC00458-203ENST00000451744 TAL1P17542 331 aaPredicted RBP8.59□□□□□ -1.03
LINC00458-203ENST00000451744 PREPP48147 710 aa8.59□□□□□ -1.03
LINC00458-203ENST00000451744 CABP4P57796 275 aa8.59□□□□□ -1.03
LINC00458-203ENST00000451744 NLRP12P59046 1061 aa8.59□□□□□ -1.03
LINC00458-203ENST00000451744 INTS5Q6P9B9 1019 aaKnown RBP8.59□□□□□ -1.03
LINC00458-203ENST00000451744 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.59□□□□□ -1.03
LINC00458-203ENST00000451744 BEND4Q6ZU67 534 aa8.59□□□□□ -1.03
LINC00458-203ENST00000451744 CLEC10AQ8IUN9 316 aa8.59□□□□□ -1.03
LINC00458-203ENST00000451744 IVNS1ABPQ9Y6Y0 642 aa8.59□□□□□ -1.03
LINC00458-203ENST00000451744 PLCH1Q4KWH8 1693 aa8.59□□□□□ -1.03
LINC00458-203ENST00000451744 TNS3Q68CZ2 1445 aa8.58□□□□□ -1.04
LINC00458-203ENST00000451744 ANKRD34AQ69YU3 496 aa8.58□□□□□ -1.04
LINC00458-203ENST00000451744 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC00458-203ENST00000451744 C1orf127Q8N9H9 656 aa8.58□□□□□ -1.04
LINC00458-203ENST00000451744 SHKBP1Q8TBC3 707 aa8.58□□□□□ -1.04
LINC00458-203ENST00000451744 SLC7A3Q8WY07 619 aa8.58□□□□□ -1.04
LINC00458-203ENST00000451744 WNT8BQ93098 351 aa8.58□□□□□ -1.04
LINC00458-203ENST00000451744 FAM83CQ9BQN1 747 aa8.58□□□□□ -1.04
LINC00458-203ENST00000451744 CDK19Q9BWU1 502 aa8.58□□□□□ -1.04
LINC00458-203ENST00000451744 SALL4Q9UJQ4 1053 aa8.58□□□□□ -1.04
LINC00458-203ENST00000451744 MON2Q7Z3U7 1717 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 NRKQ7Z2Y5 1582 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 PIK3C2AO00443 1686 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 NFKBIEO00221 500 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 TRPA1O75762 1119 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 CCDC27Q2M243 656 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 HHIPQ96QV1 700 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 RUSC1Q9BVN2 902 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 RNF208Q9H0X6 261 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 OSGEPQ9NPF4 335 aa8.57□□□□□ -1.04
LINC00458-203ENST00000451744 GNEQ9Y223 722 aaKnown RBP8.57□□□□□ -1.04
LINC00458-203ENST00000451744 NPHP3Q7Z494 1330 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms