RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 MAGEB6P1A0A0J9YX57 407 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 GNAT2P19087 354 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 C12orf60Q5U649 245 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 LRSAM1Q6UWE0 723 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 FBXO18Q8NFZ0 1043 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 USP28Q96RU2 1077 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 PPP1R9BQ96SB3 815 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 DNAJC18Q9H819 358 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 BRCA2P51587 3418 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 FAM237AA0A1B0GTK4 181 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 NOM1Q5C9Z4 860 aaKnown RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 LARP1BQ659C4 914 aaKnown RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 SGIP1Q9BQI5 828 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 AATFQ9NY61 560 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP46-202ENST00000451218 CNTNAP5Q8WYK1 1306 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 BAZ2BQ9UIF8 2168 aaKnown RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 SLURP2P0DP57 97 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 NASPP49321 788 aaPredicted RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 RCAN1P53805 252 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 UBE2HP62256 183 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 FOXD4L6Q3SYB3 417 aaPredicted RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 FOXD4L3Q6VB84 417 aaPredicted RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 TMEM87BQ96K49 555 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 YDJCA8MPS7 323 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 APBA3O96018 575 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 USP17L8P0C7I0 530 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 TMED8Q6PL24 325 aaPredicted RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 ZKSCAN3Q9BRR0 538 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 COL2A1P02458 1487 aaPredicted RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 PPEF1O14829 653 aaPredicted RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 FMNL1O95466 1100 aaPredicted RBP7.75□□□□□ -1.17
USP46-202ENST00000451218 PHKBQ93100 1093 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 PGAP2Q9UHJ9 254 aa7.75□□□□□ -1.17
USP46-202ENST00000451218 IGSF3O75054 1194 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 NR1I2O75469 434 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 WDHD1O75717 1129 aaPredicted RBP7.74□□□□□ -1.17
USP46-202ENST00000451218 BBOX1O75936 387 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 MMP10P09238 476 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 RXRBP28702 533 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 PRELPP51888 382 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 SLC15A2Q16348 729 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 CLIC4Q9Y696 253 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 FLT1P17948 1338 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 SYCE3A1L190 88 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 HSP90AA1P07900 732 aaKnown RBP7.74□□□□□ -1.17
USP46-202ENST00000451218 KCNJ4P48050 445 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 DDX49Q9Y6V7 483 aaKnown RBP7.74□□□□□ -1.17
USP46-202ENST00000451218 CENPFP49454 3210 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 GOLGA8BA8MQT2 603 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 CYTH3O43739 400 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 IFNAR1P17181 557 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 TYW1BQ6NUM6 668 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 SH3BP5LQ7L8J4 393 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 FAM212AQ96EL1 285 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 PTPRFP10586 1907 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 TNKSO95271 1327 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 CAVIN4Q5BKX8 364 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 APOBEC3HQ6NTF7 200 aaKnown RBP7.74□□□□□ -1.17
USP46-202ENST00000451218 CMTR1Q8N1G2 835 aaKnown RBP7.74□□□□□ -1.17
USP46-202ENST00000451218 HSD3B7Q9H2F3 369 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 HPSEQ9Y251 543 aa7.74□□□□□ -1.17
USP46-202ENST00000451218 USP17L12C9JPN9 530 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 USP17L21D6R901 530 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 PLEKHA8P1O95397 391 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 RASA1P20936 1047 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 ATP2B4P23634 1241 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 SHROOM1Q2M3G4 852 aaPredicted RBP7.73□□□□□ -1.17
USP46-202ENST00000451218 WDR81Q562E7 1941 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 CRACR2BQ8N4Y2 399 aaPredicted RBP7.73□□□□□ -1.17
USP46-202ENST00000451218 LINC00301Q8NCQ3 95 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 SLC44A5Q8NCS7 719 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 RBM17Q96I25 401 aaKnown RBP7.73□□□□□ -1.17
USP46-202ENST00000451218 LRP2BPQ9P2M1 347 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 DAGLAQ9Y4D2 1042 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 MORC2Q9Y6X9 1032 aaPredicted RBP7.73□□□□□ -1.17
USP46-202ENST00000451218 EN1Q05925 392 aaPredicted RBP7.73□□□□□ -1.17
USP46-202ENST00000451218 STK11IPQ8N1F8 1099 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 DYNLL2Q96FJ2 89 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 RTEL1Q9NZ71 1219 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 ISY1Q9ULR0 285 aaKnown RBP7.73□□□□□ -1.17
USP46-202ENST00000451218 GRIN1Q05586 938 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 LRRFIP1Q32MZ4 808 aaKnown RBP7.73□□□□□ -1.17
USP46-202ENST00000451218 MSL1Q68DK7 614 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 METTL16Q86W50 562 aaKnown RBP7.73□□□□□ -1.17
USP46-202ENST00000451218 SRBD1Q8N5C6 995 aaKnown RBP7.73□□□□□ -1.17
USP46-202ENST00000451218 OXER1Q8TDS5 423 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 NAPBQ9H115 298 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 ATP8A2Q9NTI2 1148 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 TCP11L1Q9NUJ3 509 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 ABCF2Q9UG63 623 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 MAD2L2Q9UI95 211 aa7.73□□□□□ -1.17
USP46-202ENST00000451218 FAM205CA6NFA0 338 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 UFL1O94874 794 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 NPR1P16066 1061 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 JAG1P78504 1218 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 C16orf86Q6ZW13 317 aa7.72□□□□□ -1.17
USP46-202ENST00000451218 FMR1NBQ8N0W7 255 aaPredicted RBP7.72□□□□□ -1.17
USP46-202ENST00000451218 ZSCAN10Q96SZ4 725 aaPredicted RBP7.72□□□□□ -1.17
USP46-202ENST00000451218 RRAGDQ9NQL2 400 aaPredicted RBP7.72□□□□□ -1.17
USP46-202ENST00000451218 FIBPO43427 364 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms