RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 RSF1Q96T23 1441 aaPredicted RBP7.5□□□□□ -1.21
GTF3C3-207ENST00000451088 LEFTY1O75610 366 aa7.49□□□□□ -1.21
GTF3C3-207ENST00000451088 RPS26P62854 115 aaKnown RBP7.49□□□□□ -1.21
GTF3C3-207ENST00000451088 PTPN11Q06124 597 aaPredicted RBP7.49□□□□□ -1.21
GTF3C3-207ENST00000451088 ZBTB37Q5TC79 503 aa7.49□□□□□ -1.21
GTF3C3-207ENST00000451088 C12orf40Q86WS4 652 aa7.49□□□□□ -1.21
GTF3C3-207ENST00000451088 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.49□□□□□ -1.21
GTF3C3-207ENST00000451088 SSU72Q9NP77 194 aaKnown RBP7.49□□□□□ -1.21
GTF3C3-207ENST00000451088 ERCC3P19447 782 aa7.48□□□□□ -1.21
GTF3C3-207ENST00000451088 IRAK1P51617 712 aa7.48□□□□□ -1.21
GTF3C3-207ENST00000451088 INPP5AQ14642 412 aa7.48□□□□□ -1.21
GTF3C3-207ENST00000451088 CCDC85BQ15834 202 aaPredicted RBP7.48□□□□□ -1.21
GTF3C3-207ENST00000451088 CYFIP1Q7L576 1253 aa7.48□□□□□ -1.21
GTF3C3-207ENST00000451088 TMC4Q7Z404 712 aa7.48□□□□□ -1.21
GTF3C3-207ENST00000451088 FBXL18Q96ME1 805 aa7.48□□□□□ -1.21
GTF3C3-207ENST00000451088 MKNK2Q9HBH9 465 aa7.48□□□□□ -1.21
GTF3C3-207ENST00000451088 MEI1Q5TIA1 1274 aa7.47□□□□□ -1.21
GTF3C3-207ENST00000451088 LRFN4Q6PJG9 635 aa7.47□□□□□ -1.21
GTF3C3-207ENST00000451088 UBE3DQ7Z6J8 389 aa7.47□□□□□ -1.21
GTF3C3-207ENST00000451088 ADGRE2Q9UHX3 823 aa7.47□□□□□ -1.21
GTF3C3-207ENST00000451088 CHD1O14646 1710 aa7.47□□□□□ -1.21
GTF3C3-207ENST00000451088 MROH2BQ7Z745 1585 aa7.46□□□□□ -1.21
GTF3C3-207ENST00000451088 ST13P50502 369 aaKnown RBP7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 PSMD2Q13200 908 aa7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 AGMOQ6ZNB7 445 aa7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 FAM214BQ7L5A3 538 aa7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 ABI1Q8IZP0 508 aa7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 KCT2Q8NC54 265 aa7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 BCL7CQ8WUZ0 217 aaPredicted RBP7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 PLPPR2Q96GM1 343 aa7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 GZF1Q9H116 711 aaPredicted RBP7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 SNCAIPQ9Y6H5 919 aa7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 U3KQE9 123 aa7.46□□□□□ -1.22
GTF3C3-207ENST00000451088 IFT140Q96RY7 1462 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 CTSHP09668 335 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 LIG3P49916 1009 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 OXCT1P55809 520 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 CCDC27Q2M243 656 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 HDXQ7Z353 690 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 WFDC3Q8IUB2 231 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 TOP6BLQ8N6T0 577 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 FAM181AQ8N9Y4 354 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 NETO1Q8TDF5 533 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 ELMO3Q96BJ8 720 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 NOC4LQ9BVI4 516 aaKnown RBP7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 PAK6Q9NQU5 681 aaPredicted RBP7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 PICK1Q9NRD5 415 aa7.45□□□□□ -1.22
GTF3C3-207ENST00000451088 CFTRP13569 1480 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 XPCQ01831 940 aaPredicted RBP7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 TAF1CQ15572 869 aaPredicted RBP7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 CBLL1Q75N03 491 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 STK11IPQ8N1F8 1099 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 PLD6Q8N2A8 252 aaKnown RBP7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 FLCNQ8NFG4 579 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 ZNF507Q8TCN5 953 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 MISP3Q96FF7 219 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 HEXIM2Q96MH2 286 aaKnown RBP7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 WNT10AQ9GZT5 417 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 PRDM10Q9NQV6 1147 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 PCDHB5Q9Y5E4 795 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 USP31Q70CQ4 1352 aa7.44□□□□□ -1.22
GTF3C3-207ENST00000451088 PRAMEF27A3QJZ7 478 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 GFRA2O00451 464 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 LRIG2O94898 1065 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 RLBP1P12271 317 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 TAL1P17542 331 aaPredicted RBP7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 CAP2P40123 477 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 WIPI1Q5MNZ9 446 aaPredicted RBP7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 CDC37L1Q7L3B6 337 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 TP53INP2Q8IXH6 220 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 AGBL5Q8NDL9 886 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 FAM161BQ96MY7 647 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 SLC5A6Q9Y289 635 aa7.43□□□□□ -1.22
GTF3C3-207ENST00000451088 IGF2BP3O00425 579 aaKnown RBP eCLIP7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 CEACAM5P06731 702 aa7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 CDK8P49336 464 aa7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 TAGLNQ01995 201 aaKnown RBP7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 SEPT6Q14141 434 aa7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 SLBPQ14493 270 aaKnown RBP eCLIP7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 IFI16Q16666 785 aaKnown RBP7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 ARMCX6Q7L4S7 300 aa7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 TNKS2Q9H2K2 1166 aa7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 FBRSQ9HAH7 460 aa7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 PLAGL2Q9UPG8 496 aa7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 TACC3Q9Y6A5 838 aa7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 AQRO60306 1485 aaKnown RBP eCLIP7.42□□□□□ -1.22
GTF3C3-207ENST00000451088 EOMESO95936 686 aa7.41□□□□□ -1.22
GTF3C3-207ENST00000451088 TFE3P19532 575 aaPredicted RBP7.41□□□□□ -1.22
GTF3C3-207ENST00000451088 PRKCQQ04759 706 aa7.41□□□□□ -1.22
GTF3C3-207ENST00000451088 MAP3K11Q16584 847 aa7.41□□□□□ -1.22
GTF3C3-207ENST00000451088 ZNF574Q6ZN55 896 aaPredicted RBP7.41□□□□□ -1.22
GTF3C3-207ENST00000451088 SPRED2Q7Z698 418 aa7.41□□□□□ -1.22
GTF3C3-207ENST00000451088 CRELD1Q96HD1 420 aa7.41□□□□□ -1.22
GTF3C3-207ENST00000451088 VAV3Q9UKW4 847 aa7.41□□□□□ -1.22
GTF3C3-207ENST00000451088 SORBS3O60504 671 aa7.4□□□□□ -1.22
GTF3C3-207ENST00000451088 LMNB1P20700 586 aa7.4□□□□□ -1.22
GTF3C3-207ENST00000451088 BNIP3Q12983 259 aa7.4□□□□□ -1.22
GTF3C3-207ENST00000451088 KRTAP9-2Q9BYQ4 174 aa7.4□□□□□ -1.22
GTF3C3-207ENST00000451088 MIR1-1HGQ9H1L0 117 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms