RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PI4KBQ9UBF8 816 aa15.56■□□□□ 0.08
VPS33A-202ENST00000451053 ANGEL1Q9UNK9 670 aaKnown RBP15.56■□□□□ 0.08
VPS33A-202ENST00000451053 LAMB1P07942 1786 aa15.56■□□□□ 0.08
VPS33A-202ENST00000451053 TMEM88BA6NKF7 163 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 UBE2Q2LH0YL09 131 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 PPP1R12BO60237 982 aaPredicted RBP15.55■□□□□ 0.08
VPS33A-202ENST00000451053 FGAP02671 866 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 C8orf34Q49A92 452 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 SBK1Q52WX2 424 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 METTL16Q86W50 562 aaKnown RBP15.55■□□□□ 0.08
VPS33A-202ENST00000451053 DYNLL2Q96FJ2 89 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 DSCC1Q9BVC3 393 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 ZNF341Q9BYN7 854 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 EHD4Q9H223 541 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.55■□□□□ 0.08
VPS33A-202ENST00000451053 OTOFQ9HC10 1997 aa15.55■□□□□ 0.08
VPS33A-202ENST00000451053 ZMYM6O95789 1325 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 MINDY4BA8MYZ0 360 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 TBC1D12O60347 775 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 FKBP1BP68106 108 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 GABPAQ06546 454 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 MAP3K11Q16584 847 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 ARMC9Q7Z3E5 817 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 FOXP4Q8IVH2 680 aaPredicted RBP15.54■□□□□ 0.08
VPS33A-202ENST00000451053 AMOTL1Q8IY63 956 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 CRACR2BQ8N4Y2 399 aaPredicted RBP15.54■□□□□ 0.08
VPS33A-202ENST00000451053 KLRG1Q96E93 195 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 BACH2Q9BYV9 841 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 HERC5Q9UII4 1024 aaKnown RBP15.54■□□□□ 0.08
VPS33A-202ENST00000451053 SERPINB13Q9UIV8 391 aa15.54■□□□□ 0.08
VPS33A-202ENST00000451053 ROBO3Q96MS0 1386 aa15.53■□□□□ 0.08
VPS33A-202ENST00000451053 PHF20L1A8MW92 1017 aa15.53■□□□□ 0.08
VPS33A-202ENST00000451053 IREB2P48200 963 aaKnown RBP15.53■□□□□ 0.08
VPS33A-202ENST00000451053 PPARAQ07869 468 aa15.53■□□□□ 0.08
VPS33A-202ENST00000451053 RRP1BQ14684 758 aaKnown RBP15.53■□□□□ 0.08
VPS33A-202ENST00000451053 STK11IPQ8N1F8 1099 aa15.53■□□□□ 0.08
VPS33A-202ENST00000451053 SLC44A5Q8NCS7 719 aa15.53■□□□□ 0.08
VPS33A-202ENST00000451053 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.53■□□□□ 0.08
VPS33A-202ENST00000451053 WRNIP1Q96S55 665 aa15.53■□□□□ 0.08
VPS33A-202ENST00000451053 TRIM34Q9BYJ4 488 aa15.53■□□□□ 0.08
VPS33A-202ENST00000451053 LSG1Q9H089 658 aaKnown RBP15.53■□□□□ 0.08
VPS33A-202ENST00000451053 ZNF112Q9UJU3 913 aa15.53■□□□□ 0.08
VPS33A-202ENST00000451053 ABT1Q9ULW3 272 aaKnown RBP15.53■□□□□ 0.08
VPS33A-202ENST00000451053 TLL2Q9Y6L7 1015 aa15.53■□□□□ 0.08
VPS33A-202ENST00000451053 INPP5BP32019 993 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 SHMT1P34896 483 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 HUNKP57058 714 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 HTRA3P83110 453 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 CTDSPL2Q05D32 466 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 LDLRAD1Q5T700 205 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.52■□□□□ 0.08
VPS33A-202ENST00000451053 KIAA1211Q6ZU35 1233 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 SAPCD2Q86UD0 394 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 ZKSCAN4Q969J2 545 aaPredicted RBP15.52■□□□□ 0.08
VPS33A-202ENST00000451053 ANO2Q9NQ90 1003 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
VPS33A-202ENST00000451053 CDK8P49336 464 aa15.51■□□□□ 0.07
VPS33A-202ENST00000451053 HAND2P61296 217 aa15.51■□□□□ 0.07
VPS33A-202ENST00000451053 MAP3K9P80192 1104 aa15.51■□□□□ 0.07
VPS33A-202ENST00000451053 C16orf86Q6ZW13 317 aa15.51■□□□□ 0.07
VPS33A-202ENST00000451053 MAP4K1Q92918 833 aa15.51■□□□□ 0.07
VPS33A-202ENST00000451053 CLMNQ96JQ2 1002 aa15.51■□□□□ 0.07
VPS33A-202ENST00000451053 NBPF3Q9H094 633 aa15.51■□□□□ 0.07
VPS33A-202ENST00000451053 UPF2Q9HAU5 1272 aaKnown RBP15.51■□□□□ 0.07
VPS33A-202ENST00000451053 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.51■□□□□ 0.07
VPS33A-202ENST00000451053 TACC3Q9Y6A5 838 aa15.51■□□□□ 0.07
VPS33A-202ENST00000451053 LAMA4Q16363 1823 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 HSPA6P17066 643 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 JAG1P78504 1218 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 VGLL4Q14135 290 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 SHROOM1Q2M3G4 852 aaPredicted RBP15.5■□□□□ 0.07
VPS33A-202ENST00000451053 TATDN1Q6P1N9 297 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 ANKRD13AQ8IZ07 590 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.5■□□□□ 0.07
VPS33A-202ENST00000451053 SWAP70Q9UH65 585 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 CTNNA3Q9UI47 895 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 ANAPC4Q9UJX5 808 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 RBM8AQ9Y5S9 174 aaKnown RBP15.5■□□□□ 0.07
VPS33A-202ENST00000451053 SNCAIPQ9Y6H5 919 aa15.5■□□□□ 0.07
VPS33A-202ENST00000451053 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
VPS33A-202ENST00000451053 DOCK1Q14185 1865 aa15.49■□□□□ 0.07
VPS33A-202ENST00000451053 GDF11O95390 407 aa15.49■□□□□ 0.07
VPS33A-202ENST00000451053 CAP2P40123 477 aa15.49■□□□□ 0.07
VPS33A-202ENST00000451053 TBC1D10CQ8IV04 446 aa15.49■□□□□ 0.07
VPS33A-202ENST00000451053 ELP3Q9H9T3 547 aa15.49■□□□□ 0.07
VPS33A-202ENST00000451053 INCENPQ9NQS7 918 aa15.49■□□□□ 0.07
VPS33A-202ENST00000451053 ZNF213O14771 459 aa15.48■□□□□ 0.07
VPS33A-202ENST00000451053 CTNND1O60716 968 aaKnown RBP15.48■□□□□ 0.07
VPS33A-202ENST00000451053 PRDM1O75626 825 aa15.48■□□□□ 0.07
VPS33A-202ENST00000451053 REC8O95072 547 aa15.48■□□□□ 0.07
VPS33A-202ENST00000451053 IMMTQ16891 758 aaKnown RBP15.48■□□□□ 0.07
VPS33A-202ENST00000451053 CERKLQ49MI3 558 aaPredicted RBP15.48■□□□□ 0.07
VPS33A-202ENST00000451053 NOL9Q5SY16 702 aaKnown RBP15.48■□□□□ 0.07
VPS33A-202ENST00000451053 TAOK2Q9UL54 1235 aa15.48■□□□□ 0.07
VPS33A-202ENST00000451053 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.48■□□□□ 0.07
VPS33A-202ENST00000451053 CSADQ9Y600 493 aa15.48■□□□□ 0.07
VPS33A-202ENST00000451053 ATAD5Q96QE3 1844 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 UNCXA6NJT0 531 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 RASSF10A6NK89 507 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 SLC3A2P08195 630 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms