RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 MROH7-TTC4A0A0A0MT08 1334 aa12.59□□□□□ -0.39
LINC01004-202ENST00000450686 A0A0G2JLL6 359 aaPredicted RBP12.58□□□□□ -0.4
LINC01004-202ENST00000450686 SEMA3EO15041 775 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 ENTPD3O75355 529 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 RHBDL3P58872 404 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 RRP1BQ14684 758 aaKnown RBP12.58□□□□□ -0.4
LINC01004-202ENST00000450686 TREML2Q5T2D2 321 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 PRRT2Q7Z6L0 340 aaPredicted RBP12.58□□□□□ -0.4
LINC01004-202ENST00000450686 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 IDI2Q9BXS1 227 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 UNC93B1Q9H1C4 597 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 PICK1Q9NRD5 415 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 HMG20BQ9P0W2 317 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 AFG3L2Q9Y4W6 797 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
LINC01004-202ENST00000450686 PNMA6EA0A0J9YXQ4 647 aa12.57□□□□□ -0.4
LINC01004-202ENST00000450686 CXCL11O14625 94 aa12.57□□□□□ -0.4
LINC01004-202ENST00000450686 PEX10O60683 326 aa12.57□□□□□ -0.4
LINC01004-202ENST00000450686 BCAR3O75815 825 aa12.57□□□□□ -0.4
LINC01004-202ENST00000450686 FCGRTP55899 365 aa12.57□□□□□ -0.4
LINC01004-202ENST00000450686 SHROOM1Q2M3G4 852 aaPredicted RBP12.57□□□□□ -0.4
LINC01004-202ENST00000450686 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
LINC01004-202ENST00000450686 FRAT1Q92837 279 aaPredicted RBP12.57□□□□□ -0.4
LINC01004-202ENST00000450686 RNF208Q9H0X6 261 aa12.57□□□□□ -0.4
LINC01004-202ENST00000450686 SNRKQ9NRH2 765 aa12.57□□□□□ -0.4
LINC01004-202ENST00000450686 CDK5RAP2Q96SN8 1893 aa12.57□□□□□ -0.4
LINC01004-202ENST00000450686 LAMA3Q16787 3333 aa12.56□□□□□ -0.4
LINC01004-202ENST00000450686 GNRH1P01148 92 aa12.56□□□□□ -0.4
LINC01004-202ENST00000450686 ERICH6Q7L0X2 663 aa12.56□□□□□ -0.4
LINC01004-202ENST00000450686 DPF3Q92784 378 aa12.56□□□□□ -0.4
LINC01004-202ENST00000450686 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
LINC01004-202ENST00000450686 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
LINC01004-202ENST00000450686 ALPK3Q96L96 1907 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 TRIM27P14373 513 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 MCAMP43121 646 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 FLT3LGP49771 235 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 PRMT2P55345 433 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
LINC01004-202ENST00000450686 ZGPATQ8N5A5 531 aaKnown RBP12.55□□□□□ -0.4
LINC01004-202ENST00000450686 ANKRD13CQ8N6S4 541 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 SPATA5Q8NB90 893 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 SH3RF3Q8TEJ3 882 aaPredicted RBP12.55□□□□□ -0.4
LINC01004-202ENST00000450686 NSUN4Q96CB9 384 aaKnown RBP12.55□□□□□ -0.4
LINC01004-202ENST00000450686 C1orf115Q9H7X2 142 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 RAI14Q9P0K7 980 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 LOC285556D6RIA3 1793 aa12.55□□□□□ -0.4
LINC01004-202ENST00000450686 GPR75-ASB3A0A0A6YYF3 556 aa12.54□□□□□ -0.4
LINC01004-202ENST00000450686 TNPO2O14787 897 aaKnown RBP12.54□□□□□ -0.4
LINC01004-202ENST00000450686 ADCY3O60266 1144 aa12.54□□□□□ -0.4
LINC01004-202ENST00000450686 INHAP05111 366 aa12.54□□□□□ -0.4
LINC01004-202ENST00000450686 HOXD10P28358 340 aa12.54□□□□□ -0.4
LINC01004-202ENST00000450686 JAG1P78504 1218 aa12.54□□□□□ -0.4
LINC01004-202ENST00000450686 MAP3K10Q02779 954 aa12.54□□□□□ -0.4
LINC01004-202ENST00000450686 SPP2Q13103 211 aa12.54□□□□□ -0.4
LINC01004-202ENST00000450686 GORABQ5T7V8 394 aa12.54□□□□□ -0.4
LINC01004-202ENST00000450686 SPTY2D1Q68D10 685 aaPredicted RBP12.54□□□□□ -0.4
LINC01004-202ENST00000450686 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
LINC01004-202ENST00000450686 UBE2Q1Q7Z7E8 422 aa12.54□□□□□ -0.4
LINC01004-202ENST00000450686 SMCR8Q8TEV9 937 aaPredicted RBP12.54□□□□□ -0.4
LINC01004-202ENST00000450686 FAM163AQ96GL9 167 aaPredicted RBP12.54□□□□□ -0.4
LINC01004-202ENST00000450686 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC01004-202ENST00000450686 PDS5AQ29RF7 1337 aaKnown RBP12.54□□□□□ -0.4
LINC01004-202ENST00000450686 MAST2Q6P0Q8 1798 aa12.53□□□□□ -0.4
LINC01004-202ENST00000450686 CTNND1O60716 968 aaKnown RBP12.53□□□□□ -0.4
LINC01004-202ENST00000450686 GJB1P08034 283 aa12.53□□□□□ -0.4
LINC01004-202ENST00000450686 GNAI3P08754 354 aa12.53□□□□□ -0.4
LINC01004-202ENST00000450686 CT47B1P0C2W7 299 aaPredicted RBP12.53□□□□□ -0.4
LINC01004-202ENST00000450686 GJA8P48165 433 aa12.53□□□□□ -0.4
LINC01004-202ENST00000450686 HMGCS2P54868 508 aa12.53□□□□□ -0.4
LINC01004-202ENST00000450686 MTX1Q13505 466 aa12.53□□□□□ -0.4
LINC01004-202ENST00000450686 ADGRA1Q86SQ6 560 aa12.53□□□□□ -0.4
LINC01004-202ENST00000450686 TEX11Q8IYF3 940 aa12.53□□□□□ -0.4
LINC01004-202ENST00000450686 U2AF1L4Q8WU68 220 aaKnown RBP12.53□□□□□ -0.4
LINC01004-202ENST00000450686 OSBPL5Q9H0X9 879 aaPredicted RBP12.53□□□□□ -0.4
LINC01004-202ENST00000450686 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
LINC01004-202ENST00000450686 AKAP2Q9Y2D5 859 aa12.53□□□□□ -0.4
LINC01004-202ENST00000450686 FARP2O94887 1054 aaPredicted RBP12.52□□□□□ -0.41
LINC01004-202ENST00000450686 GNAI2P04899 355 aa12.52□□□□□ -0.41
LINC01004-202ENST00000450686 ARID4AP29374 1257 aaPredicted RBP12.52□□□□□ -0.41
LINC01004-202ENST00000450686 TRIM32Q13049 653 aa12.52□□□□□ -0.41
LINC01004-202ENST00000450686 SLF2Q8IX21 1173 aa12.52□□□□□ -0.41
LINC01004-202ENST00000450686 TMEM57Q8N5G2 664 aa12.52□□□□□ -0.41
LINC01004-202ENST00000450686 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
LINC01004-202ENST00000450686 DIS3LQ8TF46 1054 aaKnown RBP12.52□□□□□ -0.41
LINC01004-202ENST00000450686 DEFB118Q96PH6 123 aa12.52□□□□□ -0.41
LINC01004-202ENST00000450686 DBNDD2Q9BQY9 259 aa12.52□□□□□ -0.41
LINC01004-202ENST00000450686 AATFQ9NY61 560 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC01004-202ENST00000450686 AGTPBP1Q9UPW5 1226 aa12.52□□□□□ -0.41
LINC01004-202ENST00000450686 PLXNB2O15031 1838 aa12.52□□□□□ -0.41
LINC01004-202ENST00000450686 GDF11O95390 407 aa12.51□□□□□ -0.41
LINC01004-202ENST00000450686 TIE1P35590 1138 aa12.51□□□□□ -0.41
LINC01004-202ENST00000450686 UBXN2AP68543 259 aa12.51□□□□□ -0.41
LINC01004-202ENST00000450686 G3BP1Q13283 466 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC01004-202ENST00000450686 MAPKAPK5Q8IW41 473 aa12.51□□□□□ -0.41
LINC01004-202ENST00000450686 TLR7Q9NYK1 1049 aaKnown RBP12.51□□□□□ -0.41
LINC01004-202ENST00000450686 LRP2BPQ9P2M1 347 aa12.51□□□□□ -0.41
LINC01004-202ENST00000450686 SAP30BPQ9UHR5 308 aaKnown RBP12.51□□□□□ -0.41
LINC01004-202ENST00000450686 NDUFB9Q9Y6M9 179 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms