RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 MED4Q9NPJ6 270 aa19.55■□□□□ 0.72
SCUBE2-202ENST00000450649 EYA2O00167 538 aa19.55■□□□□ 0.72
SCUBE2-202ENST00000450649 SLC35F6Q8N357 371 aa19.55■□□□□ 0.72
SCUBE2-202ENST00000450649 CTAGE15A4D2H0 777 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 PPFIA4O75335 1185 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 CTAGE8P0CG41 777 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 SPECC1Q5M775 1068 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 KRT40Q6A162 431 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 CTAGE6Q86UF2 777 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 CTAGE4Q8IX94 777 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 MB21D2Q8IYB1 491 aaPredicted RBP19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 CPLX3Q8WVH0 158 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 MED15Q96RN5 788 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 ACBD3Q9H3P7 528 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 CWC25Q9NXE8 425 aaPredicted RBP19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 LOC102724159A0A0B4J2E5 919 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 ANTXR2P58335 489 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 PWP2Q15269 919 aaKnown RBP19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 MLKLQ8NB16 471 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 SPEF2Q9C093 1822 aa19.54■□□□□ 0.72
SCUBE2-202ENST00000450649 TEX33O43247 280 aa19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 CIAO1O76071 339 aa19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 CABP4P57796 275 aa19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 RBL2Q08999 1139 aa19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 OSBP2Q969R2 916 aa19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 NAA15Q9BXJ9 866 aaKnown RBP19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 A0A1B0GTH6 734 aa19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 POSTNQ15063 836 aa19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 IMMTQ16891 758 aaKnown RBP19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 CDC5LQ99459 802 aaKnown RBP19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 NCAPGQ9BPX3 1015 aa19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 DEF6Q9H4E7 631 aa19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 HOOK1Q9UJC3 728 aaKnown RBP19.53■□□□□ 0.72
SCUBE2-202ENST00000450649 RNF40O75150 1001 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 PRR29P0C7W0 189 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 LRRC24Q50LG9 513 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 RASGRP2Q7LDG7 609 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 PPFIBP1Q86W92 1011 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 EFCAB13Q8IY85 973 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 NOA1Q8NC60 698 aaKnown RBP19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 DACH1Q9UI36 760 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 KIF1AQ12756 1690 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 NBPF26B4DH59 902 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 TTC39AQ5SRH9 613 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 NBPF14Q5TI25 921 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 NBPF15Q8N660 670 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 IGSF22Q8N9C0 903 aa19.52■□□□□ 0.72
SCUBE2-202ENST00000450649 ZNF142P52746 1687 aaPredicted RBP19.52■□□□□ 0.71
SCUBE2-202ENST00000450649 GLI3P10071 1580 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 FOXP2O15409 715 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 CPP00450 1065 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 TUBBP07437 444 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 PIP4K2BP78356 416 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 WHAMMP3Q1A5X7 153 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 AFAP1L1Q8TED9 768 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 MYCBPQ99417 103 aaPredicted RBP19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 NAPGQ99747 312 aaPredicted RBP19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 C1orf167Q5SNV9 1468 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 ABL1P00519 1130 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 MORC3Q14149 939 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 SART3Q15020 963 aaKnown RBP19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 DNAJC21Q5F1R6 531 aaKnown RBP19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 SLC9C2Q5TAH2 1124 aa19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 ELOA2Q8IYF1 753 aaPredicted RBP19.51■□□□□ 0.71
SCUBE2-202ENST00000450649 ALS2Q96Q42 1657 aa19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 SYF2O95926 243 aaKnown RBP19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 FGAP02671 866 aa19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 CSB-PGBD3P0DP91 1061 aa19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 RALYLQ86SE5 291 aaKnown RBP19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 NCOA7Q8NI08 942 aa19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 LAMB4A4D0S4 1761 aa19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 ZFYP08048 801 aaPredicted RBP19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 SARSP49591 514 aaKnown RBP19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 SKIDA1Q1XH10 827 aa19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 NT5DC1Q5TFE4 455 aa19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 TADA2BQ86TJ2 420 aa19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 KRI1Q8N9T8 703 aaKnown RBP19.5■□□□□ 0.71
SCUBE2-202ENST00000450649 WDR93Q6P2C0 686 aa19.49■□□□□ 0.71
SCUBE2-202ENST00000450649 TTLL7Q6ZT98 887 aa19.49■□□□□ 0.71
SCUBE2-202ENST00000450649 SUGP1Q8IWZ8 645 aaKnown RBP19.49■□□□□ 0.71
SCUBE2-202ENST00000450649 GRAMD1CQ8IYS0 662 aa19.49■□□□□ 0.71
SCUBE2-202ENST00000450649 ACRBPQ8NEB7 543 aa19.49■□□□□ 0.71
SCUBE2-202ENST00000450649 SERTAD1Q9UHV2 236 aa19.49■□□□□ 0.71
SCUBE2-202ENST00000450649 APTXQ7Z2E3 356 aaKnown RBP19.49■□□□□ 0.71
SCUBE2-202ENST00000450649 PHKBQ93100 1093 aa19.49■□□□□ 0.71
SCUBE2-202ENST00000450649 ZNF594Q96JF6 807 aaPredicted RBP19.49■□□□□ 0.71
SCUBE2-202ENST00000450649 POLR2DO15514 142 aaKnown RBP19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 PRPF6O94906 941 aaKnown RBP19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 RXRAP19793 462 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 E2F4Q16254 413 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 TTF2Q9UNY4 1162 aaKnown RBP19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 A0A087WUV0 522 aaPredicted RBP19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 MFAP3LO75121 409 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 AARSP49588 968 aaKnown RBP eCLIP19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 MMS22LQ6ZRQ5 1243 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 MICALL1Q8N3F8 863 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 VIPAS39Q9H9C1 493 aa19.48■□□□□ 0.71
SCUBE2-202ENST00000450649 CEP126Q9P2H0 1117 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms