RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ADCY2Q08462 1091 aa9.77□□□□□ -0.84
LSM5-208ENST00000450169 TATDN2Q93075 761 aa9.77□□□□□ -0.84
LSM5-208ENST00000450169 ITFG2Q969R8 447 aa9.77□□□□□ -0.84
LSM5-208ENST00000450169 FAM227BQ96M60 508 aa9.77□□□□□ -0.84
LSM5-208ENST00000450169 SH3GL3Q99963 347 aa9.77□□□□□ -0.84
LSM5-208ENST00000450169 USP44Q9H0E7 712 aa9.77□□□□□ -0.84
LSM5-208ENST00000450169 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.84
LSM5-208ENST00000450169 SPATS2LQ9NUQ6 558 aaKnown RBP9.77□□□□□ -0.84
LSM5-208ENST00000450169 ADGRG1Q9Y653 693 aa9.77□□□□□ -0.84
LSM5-208ENST00000450169 XRN1Q8IZH2 1706 aaKnown RBP9.77□□□□□ -0.85
LSM5-208ENST00000450169 FRMD3A2A2Y4 597 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 SOWAHDA6NJG2 315 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 TTLL13PA6NNM8 815 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 AMPHP49418 695 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 CDR1P51861 262 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 ACTN3Q08043 901 aaPredicted RBP9.77□□□□□ -0.85
LSM5-208ENST00000450169 SF3A1Q15459 793 aaKnown RBP9.77□□□□□ -0.85
LSM5-208ENST00000450169 CCDC40Q4G0X9 1142 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 CEP57Q86XR8 500 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 ARMC2Q8NEN0 867 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 EVI5LQ96CN4 794 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 LLPHQ9BRT6 129 aaKnown RBP9.77□□□□□ -0.85
LSM5-208ENST00000450169 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.77□□□□□ -0.85
LSM5-208ENST00000450169 RTEL1Q9NZ71 1219 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 HMG20BQ9P0W2 317 aa9.77□□□□□ -0.85
LSM5-208ENST00000450169 AGPSO00116 658 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 HIP1O00291 1037 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 RASSF9O75901 435 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 EZRP15311 586 aaKnown RBP9.76□□□□□ -0.85
LSM5-208ENST00000450169 NMIQ13287 307 aaPredicted RBP9.76□□□□□ -0.85
LSM5-208ENST00000450169 IRF5Q13568 498 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 PLCB4Q15147 1175 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 NUTM2GQ5VZR2 741 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 MICALCLQ6ZW33 695 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 YTHDF3Q7Z739 585 aaKnown RBP9.76□□□□□ -0.85
LSM5-208ENST00000450169 NBPF5PQ86XG9 351 aaPredicted RBP9.76□□□□□ -0.85
LSM5-208ENST00000450169 SLC35F6Q8N357 371 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 NAPGQ99747 312 aaPredicted RBP9.76□□□□□ -0.85
LSM5-208ENST00000450169 CENPHQ9H3R5 247 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 VCPKMTQ9H867 229 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 ECHDC1Q9NTX5 307 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 DDX20Q9UHI6 824 aaKnown RBP9.76□□□□□ -0.85
LSM5-208ENST00000450169 MTMR7Q9Y216 660 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 ITSN1Q15811 1721 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 A0A0U1RQJ8 604 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 GOLGA6BA6NDN3 693 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 GCKP35557 465 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 ICA1Q05084 483 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 STK38Q15208 465 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 LINC00301Q8NCQ3 95 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 NSUN7Q8NE18 718 aaKnown RBP9.76□□□□□ -0.85
LSM5-208ENST00000450169 KCNG4Q8TDN1 519 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 ATRIPQ8WXE1 791 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 GPATCH3Q96I76 525 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 GDAP1L1Q96MZ0 367 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 SH3GL2Q99962 352 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 MIS18AQ9NYP9 233 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 A2ML1A8K2U0 1454 aa9.76□□□□□ -0.85
LSM5-208ENST00000450169 PTPDC1A2A3K4 754 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 USP14P54578 494 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 KRT32Q14532 448 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 NAA25Q14CX7 972 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 SNCBQ16143 134 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 HSP90AB4PQ58FF6 505 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.75□□□□□ -0.85
LSM5-208ENST00000450169 Q6ZUG5 572 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 CCDC13Q8IYE1 715 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 NBPF3Q9H094 633 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 CABP1Q9NZU7 370 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 TUBE1Q9UJT0 475 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 SERPINA10Q9UK55 444 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 CRB1P82279 1406 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 A6NNZ2 444 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 TUBB8Q3ZCM7 444 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 NCAPH2Q6IBW4 605 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 OLFM4Q6UX06 510 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 RAD9BQ6WBX8 426 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 CCDC50Q8IVM0 306 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 CCDC26Q8TAB7 109 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 PANX2Q96RD6 677 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 PLCD4Q9BRC7 762 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 SELENOOQ9BVL4 669 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 C19orf44Q9H6X5 657 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 ATP6V0A4Q9HBG4 840 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 PLSCR2Q9NRY7 297 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 MYO6Q9UM54 1294 aa9.75□□□□□ -0.85
LSM5-208ENST00000450169 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.75□□□□□ -0.85
LSM5-208ENST00000450169 ALKQ9UM73 1620 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 PTPRMP28827 1452 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 EME2A4GXA9 379 aaPredicted RBP9.74□□□□□ -0.85
LSM5-208ENST00000450169 SKAP2O75563 359 aaPredicted RBP9.74□□□□□ -0.85
LSM5-208ENST00000450169 PFKFB1P16118 471 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 GUCY1B3Q02153 619 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 SF3B2Q13435 895 aaKnown RBP9.74□□□□□ -0.85
LSM5-208ENST00000450169 OS9Q13438 667 aaPredicted RBP9.74□□□□□ -0.85
LSM5-208ENST00000450169 HSP90AA4PQ58FG1 418 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 TLDC1Q6P9B6 456 aa9.74□□□□□ -0.85
LSM5-208ENST00000450169 CLASRPQ8N2M8 674 aaKnown RBP9.74□□□□□ -0.85
LSM5-208ENST00000450169 NEK1Q96PY6 1258 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms