RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 NFE2L2Q16236 605 aa10.21□□□□□ -0.77
LINC01961-201ENST00000449954 CCDC191Q8NCU4 936 aa10.21□□□□□ -0.77
LINC01961-201ENST00000449954 TATDN2Q93075 761 aa10.21□□□□□ -0.77
LINC01961-201ENST00000449954 ZKSCAN4Q969J2 545 aaPredicted RBP10.21□□□□□ -0.77
LINC01961-201ENST00000449954 COA7Q96BR5 231 aa10.21□□□□□ -0.77
LINC01961-201ENST00000449954 THEGQ9P2T0 379 aa10.21□□□□□ -0.77
LINC01961-201ENST00000449954 DBF4Q9UBU7 674 aaPredicted RBP10.21□□□□□ -0.77
LINC01961-201ENST00000449954 MYH3P11055 1940 aa10.2□□□□□ -0.78
LINC01961-201ENST00000449954 COL6A1P12109 1028 aa10.2□□□□□ -0.78
LINC01961-201ENST00000449954 KCNJ4P48050 445 aa10.2□□□□□ -0.78
LINC01961-201ENST00000449954 DCAF15Q66K64 600 aa10.2□□□□□ -0.78
LINC01961-201ENST00000449954 MAST2Q6P0Q8 1798 aa10.2□□□□□ -0.78
LINC01961-201ENST00000449954 IL27Q8NEV9 243 aa10.2□□□□□ -0.78
LINC01961-201ENST00000449954 ASB2Q96Q27 587 aa10.2□□□□□ -0.78
LINC01961-201ENST00000449954 TDRD3Q9H7E2 651 aaKnown RBP10.2□□□□□ -0.78
LINC01961-201ENST00000449954 HYPKQ9NX55 129 aa10.2□□□□□ -0.78
LINC01961-201ENST00000449954 MUC6Q6W4X9 2439 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 RPAP1Q9BWH6 1393 aaPredicted RBP10.19□□□□□ -0.78
LINC01961-201ENST00000449954 TCP10L2B9ZVM9 353 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 C3orf80F5H4A9 247 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 CYP2C8P10632 490 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 IL1R1P14778 569 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 IGHMBP2P38935 993 aaKnown RBP10.19□□□□□ -0.78
LINC01961-201ENST00000449954 MOGSQ13724 837 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 LRRC26Q2I0M4 334 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 HDGFL1Q5TGJ6 251 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 C15orf52Q6ZUT6 534 aaKnown RBP10.19□□□□□ -0.78
LINC01961-201ENST00000449954 NUDT18Q6ZVK8 323 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 ZNF804AQ7Z570 1209 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 USP38Q8NB14 1042 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.19□□□□□ -0.78
LINC01961-201ENST00000449954 PRKAG2Q9UGJ0 569 aa10.19□□□□□ -0.78
LINC01961-201ENST00000449954 XIRP2A4UGR9 3374 aa10.18□□□□□ -0.78
LINC01961-201ENST00000449954 HOXB7P09629 217 aa10.18□□□□□ -0.78
LINC01961-201ENST00000449954 MRPS5P82675 430 aaKnown RBP10.18□□□□□ -0.78
LINC01961-201ENST00000449954 PADI6Q6TGC4 694 aa10.18□□□□□ -0.78
LINC01961-201ENST00000449954 RIC3Q7Z5B4 369 aa10.18□□□□□ -0.78
LINC01961-201ENST00000449954 DZIP1LQ8IYY4 767 aaKnown RBP10.18□□□□□ -0.78
LINC01961-201ENST00000449954 CWC25Q9NXE8 425 aaPredicted RBP10.18□□□□□ -0.78
LINC01961-201ENST00000449954 SLC45A1Q9Y2W3 748 aa10.18□□□□□ -0.78
LINC01961-201ENST00000449954 LTBP2Q14767 1821 aa10.18□□□□□ -0.78
LINC01961-201ENST00000449954 CXCL11O14625 94 aa10.17□□□□□ -0.78
LINC01961-201ENST00000449954 GPAT2Q6NUI2 795 aa10.17□□□□□ -0.78
LINC01961-201ENST00000449954 FASTKD5Q7L8L6 764 aaKnown RBP10.17□□□□□ -0.78
LINC01961-201ENST00000449954 ALYREFQ86V81 257 aaKnown RBP10.17□□□□□ -0.78
LINC01961-201ENST00000449954 TTLL11Q8NHH1 800 aa10.17□□□□□ -0.78
LINC01961-201ENST00000449954 SMCR8Q8TEV9 937 aaPredicted RBP10.17□□□□□ -0.78
LINC01961-201ENST00000449954 ZNF341Q9BYN7 854 aa10.17□□□□□ -0.78
LINC01961-201ENST00000449954 GREM2Q9H772 168 aa10.17□□□□□ -0.78
LINC01961-201ENST00000449954 MAPK8IP3Q9UPT6 1336 aa10.16□□□□□ -0.78
LINC01961-201ENST00000449954 SHHQ15465 462 aa10.16□□□□□ -0.78
LINC01961-201ENST00000449954 FAM83AQ86UY5 434 aa10.16□□□□□ -0.78
LINC01961-201ENST00000449954 P2RX7Q99572 595 aaKnown RBP10.16□□□□□ -0.78
LINC01961-201ENST00000449954 LRFN3Q9BTN0 628 aa10.16□□□□□ -0.78
LINC01961-201ENST00000449954 TTF2Q9UNY4 1162 aaKnown RBP10.16□□□□□ -0.78
LINC01961-201ENST00000449954 CNGB1Q14028 1251 aaPredicted RBP10.15□□□□□ -0.78
LINC01961-201ENST00000449954 FAM110CQ1W6H9 321 aa10.15□□□□□ -0.78
LINC01961-201ENST00000449954 NOL9Q5SY16 702 aaKnown RBP10.15□□□□□ -0.78
LINC01961-201ENST00000449954 MAP3K21Q5TCX8 1036 aa10.15□□□□□ -0.78
LINC01961-201ENST00000449954 FKBP1CQ5VVH2 108 aa10.15□□□□□ -0.78
LINC01961-201ENST00000449954 SMYD5Q6GMV2 418 aa10.15□□□□□ -0.78
LINC01961-201ENST00000449954 PLEKHF1Q96S99 279 aa10.15□□□□□ -0.78
LINC01961-201ENST00000449954 MPHOSPH8Q99549 860 aa10.15□□□□□ -0.78
LINC01961-201ENST00000449954 MYD88Q99836 296 aa10.15□□□□□ -0.78
LINC01961-201ENST00000449954 PNNQ9H307 717 aaKnown RBP10.15□□□□□ -0.78
LINC01961-201ENST00000449954 TMOD2Q9NZR1 351 aa10.15□□□□□ -0.78
LINC01961-201ENST00000449954 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
LINC01961-201ENST00000449954 INPP5BP32019 993 aa10.14□□□□□ -0.79
LINC01961-201ENST00000449954 CRKP46108 304 aa10.14□□□□□ -0.79
LINC01961-201ENST00000449954 CHRNDQ07001 517 aa10.14□□□□□ -0.79
LINC01961-201ENST00000449954 LMOD3Q0VAK6 560 aa10.14□□□□□ -0.79
LINC01961-201ENST00000449954 PTGDRQ13258 359 aa10.14□□□□□ -0.79
LINC01961-201ENST00000449954 TMEM31Q5JXX7 168 aa10.14□□□□□ -0.79
LINC01961-201ENST00000449954 MFSD14BQ5SR56 506 aa10.14□□□□□ -0.79
LINC01961-201ENST00000449954 AKNAD1Q5T1N1 836 aa10.14□□□□□ -0.79
LINC01961-201ENST00000449954 TTC13Q8NBP0 860 aa10.14□□□□□ -0.79
LINC01961-201ENST00000449954 DOCK3Q8IZD9 2030 aa10.13□□□□□ -0.79
LINC01961-201ENST00000449954 A0A0G2JLL6 359 aaPredicted RBP10.13□□□□□ -0.79
LINC01961-201ENST00000449954 PPP4CP60510 307 aa10.13□□□□□ -0.79
LINC01961-201ENST00000449954 GRIN2CQ14957 1233 aa10.13□□□□□ -0.79
LINC01961-201ENST00000449954 C9orf50Q5SZB4 431 aa10.13□□□□□ -0.79
LINC01961-201ENST00000449954 PRRT2Q7Z6L0 340 aaPredicted RBP10.13□□□□□ -0.79
LINC01961-201ENST00000449954 GAS2L1Q99501 681 aaPredicted RBP10.13□□□□□ -0.79
LINC01961-201ENST00000449954 ZNF112Q9UJU3 913 aa10.13□□□□□ -0.79
LINC01961-201ENST00000449954 A0A1B0GUL6 1792 aa10.12□□□□□ -0.79
LINC01961-201ENST00000449954 ITGA6P23229 1130 aa10.12□□□□□ -0.79
LINC01961-201ENST00000449954 HDLBPQ00341 1268 aaKnown RBP10.12□□□□□ -0.79
LINC01961-201ENST00000449954 TRIM32Q13049 653 aa10.12□□□□□ -0.79
LINC01961-201ENST00000449954 KRT24Q2M2I5 525 aa10.12□□□□□ -0.79
LINC01961-201ENST00000449954 TRMT44Q8IYL2 757 aaKnown RBP10.12□□□□□ -0.79
LINC01961-201ENST00000449954 ANKRD13CQ8N6S4 541 aa10.12□□□□□ -0.79
LINC01961-201ENST00000449954 TRIB2Q92519 343 aa10.12□□□□□ -0.79
LINC01961-201ENST00000449954 JARID2Q92833 1246 aaPredicted RBP10.12□□□□□ -0.79
LINC01961-201ENST00000449954 JAG2Q9Y219 1238 aa10.12□□□□□ -0.79
LINC01961-201ENST00000449954 DNAJB2P25686 324 aa10.11□□□□□ -0.79
LINC01961-201ENST00000449954 PPP2R1AP30153 589 aa10.11□□□□□ -0.79
LINC01961-201ENST00000449954 MRE11P49959 708 aa10.11□□□□□ -0.79
LINC01961-201ENST00000449954 NYAP1Q6ZVC0 841 aa10.11□□□□□ -0.79
LINC01961-201ENST00000449954 METTL22Q9BUU2 404 aaPredicted RBP10.11□□□□□ -0.79
LINC01961-201ENST00000449954 CHL1O00533 1208 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms