RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 PARP10Q53GL7 1025 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 OTOP1Q7RTM1 612 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 UBE3BQ7Z3V4 1068 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 PRR7Q8TB68 274 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 DPF2Q92785 391 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 CNOT7Q9UIV1 285 aaKnown RBP10.01□□□□□ -0.81
NPHP1-208ENST00000449600 STXBP5LQ9Y2K9 1186 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 UTYO14607 1347 aa10.01□□□□□ -0.81
NPHP1-208ENST00000449600 H7C1D1 291 aa10□□□□□ -0.81
NPHP1-208ENST00000449600 WDR4P57081 412 aaKnown RBP10□□□□□ -0.81
NPHP1-208ENST00000449600 NUCB1Q02818 461 aa10□□□□□ -0.81
NPHP1-208ENST00000449600 TNIP1Q15025 636 aa10□□□□□ -0.81
NPHP1-208ENST00000449600 PPP1R42Q7Z4L9 355 aa10□□□□□ -0.81
NPHP1-208ENST00000449600 CHD1LQ86WJ1 897 aa10□□□□□ -0.81
NPHP1-208ENST00000449600 ERC1Q8IUD2 1116 aa10□□□□□ -0.81
NPHP1-208ENST00000449600 ISCA1Q9BUE6 129 aa10□□□□□ -0.81
NPHP1-208ENST00000449600 RTFDC1Q9BY42 306 aaPredicted RBP10□□□□□ -0.81
NPHP1-208ENST00000449600 RIC1Q4ADV7 1423 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 MUC3AQ02505 3323 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 ADM5C9JUS6 153 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 SURF6O75683 361 aaKnown RBP9.99□□□□□ -0.81
NPHP1-208ENST00000449600 SSTR3P32745 418 aaPredicted RBP9.99□□□□□ -0.81
NPHP1-208ENST00000449600 G3BP1Q13283 466 aaKnown RBP eCLIP9.99□□□□□ -0.81
NPHP1-208ENST00000449600 SCARF1Q14162 830 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 AOC3Q16853 763 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 SIRT2Q8IXJ6 389 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 SUCLG2Q96I99 432 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 LRRCC1Q9C099 1032 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 LNPKQ9C0E8 428 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 PTPN22Q9Y2R2 807 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 CHMP3Q9Y3E7 222 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 TRIM17Q9Y577 477 aa9.99□□□□□ -0.81
NPHP1-208ENST00000449600 H7C1W4 665 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 APBB1O00213 710 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 TULP1O00294 542 aaPredicted RBP9.98□□□□□ -0.81
NPHP1-208ENST00000449600 SOX1O00570 391 aaPredicted RBP9.98□□□□□ -0.81
NPHP1-208ENST00000449600 PCCAP05165 728 aaPredicted RBP9.98□□□□□ -0.81
NPHP1-208ENST00000449600 GPTP24298 496 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 GTF2E1P29083 439 aaPredicted RBP9.98□□□□□ -0.81
NPHP1-208ENST00000449600 MTX1Q13505 466 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 MTMR2Q13614 643 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 ZBTB38Q8NAP3 1195 aaPredicted RBP9.98□□□□□ -0.81
NPHP1-208ENST00000449600 SSH3Q8TE77 659 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 DCPSQ96C86 337 aaKnown RBP9.98□□□□□ -0.81
NPHP1-208ENST00000449600 ZNF333Q96JL9 665 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 CDK15Q96Q40 435 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 BCL11AQ9H165 835 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 R3HDMLQ9H3Y0 253 aa9.98□□□□□ -0.81
NPHP1-208ENST00000449600 TRMT112Q9UI30 125 aaKnown RBP9.98□□□□□ -0.81
NPHP1-208ENST00000449600 PNMA6EA0A0J9YXQ4 647 aa9.97□□□□□ -0.81
NPHP1-208ENST00000449600 SHTN1A0MZ66 631 aa9.97□□□□□ -0.81
NPHP1-208ENST00000449600 EIF5BO60841 1220 aaKnown RBP9.97□□□□□ -0.81
NPHP1-208ENST00000449600 SREBF2Q12772 1141 aa9.97□□□□□ -0.81
NPHP1-208ENST00000449600 TAF7LQ5H9L4 462 aa9.97□□□□□ -0.81
NPHP1-208ENST00000449600 NLRP10Q86W26 655 aa9.97□□□□□ -0.81
NPHP1-208ENST00000449600 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
NPHP1-208ENST00000449600 CRAMP1Q96RY5 1269 aa9.97□□□□□ -0.81
NPHP1-208ENST00000449600 UTP14AQ9BVJ6 771 aaKnown RBP9.97□□□□□ -0.81
NPHP1-208ENST00000449600 BICC1Q9H694 974 aaKnown RBP9.97□□□□□ -0.81
NPHP1-208ENST00000449600 NIP7Q9Y221 180 aaKnown RBP eCLIP9.97□□□□□ -0.81
NPHP1-208ENST00000449600 SPDYE5A6NIY4 337 aa9.96□□□□□ -0.82
NPHP1-208ENST00000449600 GSK3AP49840 483 aa9.96□□□□□ -0.82
NPHP1-208ENST00000449600 KIAA2012Q0VF49 1180 aa9.96□□□□□ -0.82
NPHP1-208ENST00000449600 HLFQ16534 295 aa9.96□□□□□ -0.82
NPHP1-208ENST00000449600 CCDC57Q2TAC2 916 aa9.96□□□□□ -0.82
NPHP1-208ENST00000449600 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
NPHP1-208ENST00000449600 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.96□□□□□ -0.82
NPHP1-208ENST00000449600 SUPT20HQ8NEM7 779 aa9.96□□□□□ -0.82
NPHP1-208ENST00000449600 CDCA5Q96FF9 252 aa9.96□□□□□ -0.82
NPHP1-208ENST00000449600 NYXQ9GZU5 481 aa9.96□□□□□ -0.82
NPHP1-208ENST00000449600 EXOC6BQ9Y2D4 811 aa9.96□□□□□ -0.82
NPHP1-208ENST00000449600 IRS4O14654 1257 aaPredicted RBP9.95□□□□□ -0.82
NPHP1-208ENST00000449600 RAD17O75943 681 aa9.95□□□□□ -0.82
NPHP1-208ENST00000449600 EGFRP00533 1210 aa9.95□□□□□ -0.82
NPHP1-208ENST00000449600 LMBR1LQ6UX01 489 aa9.95□□□□□ -0.82
NPHP1-208ENST00000449600 ZNF34Q8IZ26 560 aa9.95□□□□□ -0.82
NPHP1-208ENST00000449600 CLASRPQ8N2M8 674 aaKnown RBP9.95□□□□□ -0.82
NPHP1-208ENST00000449600 KRI1Q8N9T8 703 aaKnown RBP9.95□□□□□ -0.82
NPHP1-208ENST00000449600 JARID2Q92833 1246 aaPredicted RBP9.95□□□□□ -0.82
NPHP1-208ENST00000449600 GPATCH3Q96I76 525 aa9.95□□□□□ -0.82
NPHP1-208ENST00000449600 ZFAND3Q9H8U3 227 aa9.95□□□□□ -0.82
NPHP1-208ENST00000449600 NOP58Q9Y2X3 529 aaKnown RBP9.95□□□□□ -0.82
NPHP1-208ENST00000449600 SH3TC1Q8TE82 1336 aa9.95□□□□□ -0.82
NPHP1-208ENST00000449600 ZNF609O15014 1411 aa9.95□□□□□ -0.82
NPHP1-208ENST00000449600 FAM177BA6PVY3 158 aa9.94□□□□□ -0.82
NPHP1-208ENST00000449600 PDE8AO60658 829 aa9.94□□□□□ -0.82
NPHP1-208ENST00000449600 RPS12P25398 132 aaKnown RBP9.94□□□□□ -0.82
NPHP1-208ENST00000449600 IFIT5Q13325 482 aaKnown RBP9.94□□□□□ -0.82
NPHP1-208ENST00000449600 RABL6Q3YEC7 729 aaPredicted RBP9.94□□□□□ -0.82
NPHP1-208ENST00000449600 LYPD8Q6UX82 237 aa9.94□□□□□ -0.82
NPHP1-208ENST00000449600 SLC51AQ86UW1 340 aa9.94□□□□□ -0.82
NPHP1-208ENST00000449600 FAM174AQ8TBP5 190 aa9.94□□□□□ -0.82
NPHP1-208ENST00000449600 FOXJ1Q92949 421 aa9.94□□□□□ -0.82
NPHP1-208ENST00000449600 FAM89AQ96GI7 184 aa9.94□□□□□ -0.82
NPHP1-208ENST00000449600 PLA2G12BQ9BX93 195 aa9.94□□□□□ -0.82
NPHP1-208ENST00000449600 ATP6V0A2Q9Y487 856 aa9.94□□□□□ -0.82
NPHP1-208ENST00000449600 ABCC12Q96J65 1359 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 ANKRD18BA2A2Z9 1011 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 YDJCA8MPS7 323 aa9.93□□□□□ -0.82
NPHP1-208ENST00000449600 F12P00748 615 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms