RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 HDAC6Q9UBN7 1215 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 MYO6Q9UM54 1294 aa14□□□□□ -0.17
UBE3B-204ENST00000449510 MAP3K4Q9Y6R4 1608 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 ARHGEF40Q8TER5 1519 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 A0A1W2PQ27 194 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 A0A1W2PQ64 194 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 A0A1W2PQD8 194 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 TLDC2A0PJX2 215 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 CCDC151A5D8V7 595 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 EIF3CLB5ME19 914 aaKnown RBP13.99□□□□□ -0.17
UBE3B-204ENST00000449510 UBE2Q2LH0YL09 131 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 IGKV5-2P06315 115 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 CYP27A1Q02318 531 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 PTPN12Q05209 780 aaKnown RBP13.99□□□□□ -0.17
UBE3B-204ENST00000449510 TBC1D8BQ0IIM8 1120 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 THEMISQ8N1K5 641 aaPredicted RBP13.99□□□□□ -0.17
UBE3B-204ENST00000449510 TAF4BQ92750 862 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 EIF3CQ99613 913 aaKnown RBP13.99□□□□□ -0.17
UBE3B-204ENST00000449510 IQGAP3Q86VI3 1631 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 SALL3Q9BXA9 1300 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 CCDC194A0A1B0GVG4 234 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 TRMT1LQ7Z2T5 733 aaKnown RBP13.99□□□□□ -0.17
UBE3B-204ENST00000449510 ANKRD18AQ8IVF6 992 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 PUS7LQ9H0K6 701 aaKnown RBP13.99□□□□□ -0.17
UBE3B-204ENST00000449510 TFR2Q9UP52 801 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 LTKP29376 864 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 SLC7A5Q01650 507 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 CATIPQ7Z7H3 387 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 IFNL2Q8IZJ0 200 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 IP6K1Q92551 441 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 EPSTI1Q96J88 318 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 PRDM11Q9NQV5 511 aa13.99□□□□□ -0.17
UBE3B-204ENST00000449510 SNAP23O00161 211 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 MCM3P25205 808 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 CYLC1P35663 651 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-204ENST00000449510 IQCA1Q86XH1 822 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 CCDC114Q96M63 670 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 TULP4Q9NRJ4 1543 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 CTDNEP1O95476 244 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 GBP6Q6ZN66 633 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 PIK3AP1Q6ZUJ8 805 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 EXOC4Q96A65 974 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 MAN1B1Q9UKM7 699 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 ABCA6Q8N139 1617 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 VSNL1P62760 191 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 ORAI2Q96SN7 254 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 PPANQ9NQ55 473 aaKnown RBP13.98□□□□□ -0.17
UBE3B-204ENST00000449510 POLR3EQ9NVU0 708 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 SAR1BQ9Y6B6 198 aa13.98□□□□□ -0.17
UBE3B-204ENST00000449510 ANKRD18BA2A2Z9 1011 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 SASH3O75995 380 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 KSR1Q8IVT5 923 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 DDX17Q92841 729 aaKnown RBP13.97□□□□□ -0.17
UBE3B-204ENST00000449510 DSCC1Q9BVC3 393 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 MRPL44Q9H9J2 332 aaKnown RBP13.97□□□□□ -0.17
UBE3B-204ENST00000449510 DENND2AQ9ULE3 1009 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 PARP3Q9Y6F1 533 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 TCHHQ07283 1943 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 TBC1D8O95759 1140 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 ZFYP08048 801 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-204ENST00000449510 FOXR1Q6PIV2 292 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 APPBP2Q92624 585 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 UBA5Q9GZZ9 404 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 CSRNP2Q9H175 543 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 FAM207AQ9NSI2 230 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-204ENST00000449510 WWC3Q9ULE0 1092 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 TTF2Q9UNY4 1162 aaKnown RBP13.97□□□□□ -0.17
UBE3B-204ENST00000449510 PDE6BP35913 854 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 ASIC1P78348 528 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 ZFYVE27Q5T4F4 411 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 CYP26C1Q6V0L0 522 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 NOSTRINQ8IVI9 506 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 JAKMIP2Q96AA8 810 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 TRIM31Q9BZY9 425 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 STX8Q9UNK0 236 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 PCDHB6Q9Y5E3 794 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 IGSF1Q8N6C5 1336 aa13.97□□□□□ -0.17
UBE3B-204ENST00000449510 ATF3P18847 181 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 CYP7A1P22680 504 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 PDE4BQ07343 736 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 CFAP58Q5T655 872 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 C19orf44Q9H6X5 657 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 CDC42BPBQ9Y5S2 1711 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 H2AFXP16104 143 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-204ENST00000449510 CKAP4Q07065 602 aaKnown RBP13.96□□□□□ -0.17
UBE3B-204ENST00000449510 RILPL1Q5EBL4 403 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 IFIT1BQ5T764 474 aaKnown RBP13.96□□□□□ -0.17
UBE3B-204ENST00000449510 USP49Q70CQ1 688 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 ZNF532Q9HCE3 1301 aa13.96□□□□□ -0.17
UBE3B-204ENST00000449510 PLEKHG3A1L390 1219 aa13.96□□□□□ -0.18
UBE3B-204ENST00000449510 IKBKBO14920 756 aa13.96□□□□□ -0.18
UBE3B-204ENST00000449510 TACC1O75410 805 aa13.96□□□□□ -0.18
UBE3B-204ENST00000449510 GBP2P32456 591 aaPredicted RBP13.96□□□□□ -0.18
UBE3B-204ENST00000449510 MAP2K2P36507 400 aa13.96□□□□□ -0.18
UBE3B-204ENST00000449510 SHC4Q6S5L8 630 aa13.96□□□□□ -0.18
UBE3B-204ENST00000449510 TMTC1Q8IUR5 882 aa13.96□□□□□ -0.18
UBE3B-204ENST00000449510 IQUBQ8NA54 791 aa13.96□□□□□ -0.18
UBE3B-204ENST00000449510 PREX2Q70Z35 1606 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms