RNA–Protein interactions for RNA: ENST00000449186.2

RPRD1B-202, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-202ENST00000449186 ELP3Q9H9T3 547 aa13.25□□□□□ -0.29
RPRD1B-202ENST00000449186 MCM9Q9NXL9 1143 aa13.25□□□□□ -0.29
RPRD1B-202ENST00000449186 PPP1R12BO60237 982 aaPredicted RBP13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 GJA5P36382 358 aa13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 VGLL4Q14135 290 aa13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 MAP3K11Q16584 847 aa13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 RASAL3Q86YV0 1011 aa13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 SLC44A5Q8NCS7 719 aa13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 DYNLL2Q96FJ2 89 aa13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 ZNF341Q9BYN7 854 aa13.24□□□□□ -0.29
RPRD1B-202ENST00000449186 WDR33Q9C0J8 1336 aaKnown RBP13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 USP17L12C9JPN9 530 aa13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 USP17L21D6R901 530 aa13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 IREB2P48200 963 aaKnown RBP13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 FKBP1BP68106 108 aa13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 MAP3K10Q02779 954 aa13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 TMED8Q6PL24 325 aaPredicted RBP13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 SNCAIPQ9Y6H5 919 aa13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 COL2A1P02458 1487 aaPredicted RBP13.23□□□□□ -0.29
RPRD1B-202ENST00000449186 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
RPRD1B-202ENST00000449186 CTR9Q6PD62 1173 aa13.22□□□□□ -0.29
RPRD1B-202ENST00000449186 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
RPRD1B-202ENST00000449186 PI4KBQ9UBF8 816 aa13.22□□□□□ -0.29
RPRD1B-202ENST00000449186 ZNF112Q9UJU3 913 aa13.22□□□□□ -0.29
RPRD1B-202ENST00000449186 GDF11O95390 407 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 APPP05067 770 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 SLC10A3P09131 477 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 CHMLP26374 656 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 MCMDC2Q4G0Z9 681 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 DCAF15Q66K64 600 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 ANKRD13AQ8IZ07 590 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 IFNL3Q8IZI9 196 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 SLC10A4Q96EP9 437 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 DHX36Q9H2U1 1008 aaKnown RBP13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 HELLSQ9NRZ9 838 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 DIAPH3Q9NSV4 1193 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 TACC3Q9Y6A5 838 aa13.21□□□□□ -0.29
RPRD1B-202ENST00000449186 ATAD5Q96QE3 1844 aa13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 SHMT1P34896 483 aa13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 KIF23Q02241 960 aaPredicted RBP13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 LRRFIP1Q32MZ4 808 aaKnown RBP13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 C12orf60Q5U649 245 aa13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 METTL16Q86W50 562 aaKnown RBP13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 CERS3Q8IU89 383 aa13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 CRACR2BQ8N4Y2 399 aaPredicted RBP13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 OPTNQ96CV9 577 aa13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 HHIPL1Q96JK4 782 aa13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 INCENPQ9NQS7 918 aa13.2□□□□□ -0.3
RPRD1B-202ENST00000449186 CCDC171Q6TFL3 1326 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 DOCK1Q14185 1865 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 PHIPQ8WWQ0 1821 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 MINDY4BA8MYZ0 360 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 TBC1D12O60347 775 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 TDO2P48775 406 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 GABPAQ06546 454 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 SPRYD7Q5W111 196 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 FOXP4Q8IVH2 680 aaPredicted RBP13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 SERPINB13Q9UIV8 391 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 CSADQ9Y600 493 aa13.19□□□□□ -0.3
RPRD1B-202ENST00000449186 THSD7BQ9C0I4 1608 aa13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 LAMB1P07942 1786 aa13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 HSPD1P10809 573 aaKnown RBP13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 DGKZQ13574 1117 aa13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 TTC6Q86TZ1 520 aa13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 NKX2-3Q8TAU0 364 aa13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 HOOK2Q96ED9 719 aa13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 PCNTO95613 3336 aa13.18□□□□□ -0.3
RPRD1B-202ENST00000449186 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 IRF6O14896 467 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 PRDM1O75626 825 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 FGAP02671 866 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 PTPRAP18433 802 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 CAP2P40123 477 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 ECE1P42892 770 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 CDK8P49336 464 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 PTH1RQ03431 593 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 BMP2KLQ5H9B9 411 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 NOL9Q5SY16 702 aaKnown RBP13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 TATDN1Q6P1N9 297 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 SCYL3Q8IZE3 742 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 CCDC102AQ96A19 550 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 EHD4Q9H223 541 aa13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
RPRD1B-202ENST00000449186 MYH8P13535 1937 aa13.16□□□□□ -0.3
RPRD1B-202ENST00000449186 CTNND1O60716 968 aaKnown RBP13.16□□□□□ -0.3
RPRD1B-202ENST00000449186 GH2P01242 217 aa13.16□□□□□ -0.3
RPRD1B-202ENST00000449186 AKR1B1P15121 316 aa13.16□□□□□ -0.3
RPRD1B-202ENST00000449186 GNAT2P19087 354 aa13.16□□□□□ -0.3
RPRD1B-202ENST00000449186 GUCY1A2P33402 732 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms