RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 EPB41L4AQ9HCS5 686 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-211ENST00000449159 DCP1AQ9NPI6 582 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-211ENST00000449159 ANGEL1Q9UNK9 670 aaKnown RBP12.78□□□□□ -0.36
SMPD4-211ENST00000449159 SLC4A4Q9Y6R1 1079 aa12.78□□□□□ -0.36
SMPD4-211ENST00000449159 DOCK1Q14185 1865 aa12.78□□□□□ -0.36
SMPD4-211ENST00000449159 SMIM22K7EJ46 135 aa12.77□□□□□ -0.37
SMPD4-211ENST00000449159 FOXP2O15409 715 aa12.77□□□□□ -0.37
SMPD4-211ENST00000449159 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-211ENST00000449159 CYP2D6P10635 497 aa12.77□□□□□ -0.37
SMPD4-211ENST00000449159 CWC27Q6UX04 472 aaKnown RBP12.77□□□□□ -0.37
SMPD4-211ENST00000449159 C2orf69Q8N8R5 385 aa12.77□□□□□ -0.37
SMPD4-211ENST00000449159 IL25Q9H293 177 aa12.77□□□□□ -0.37
SMPD4-211ENST00000449159 DIAPH3Q9NSV4 1193 aa12.77□□□□□ -0.37
SMPD4-211ENST00000449159 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.37
SMPD4-211ENST00000449159 CYP2D7A0A087X1C5 515 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 FKBP1BP68106 108 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 BMP2KLQ5H9B9 411 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 VPS53Q5VIR6 699 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 RGMBQ6NW40 437 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 DNAJC18Q9H819 358 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 HELLSQ9NRZ9 838 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 MCM9Q9NXL9 1143 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-211ENST00000449159 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
SMPD4-211ENST00000449159 FAM155AB1AL88 458 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-211ENST00000449159 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-211ENST00000449159 CHMLP26374 656 aa12.75□□□□□ -0.37
SMPD4-211ENST00000449159 PLCD1P51178 756 aa12.75□□□□□ -0.37
SMPD4-211ENST00000449159 MAP3K11Q16584 847 aa12.75□□□□□ -0.37
SMPD4-211ENST00000449159 MCMDC2Q4G0Z9 681 aa12.75□□□□□ -0.37
SMPD4-211ENST00000449159 DCAF15Q66K64 600 aa12.75□□□□□ -0.37
SMPD4-211ENST00000449159 ARMC9Q7Z3E5 817 aa12.75□□□□□ -0.37
SMPD4-211ENST00000449159 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
SMPD4-211ENST00000449159 ATP8A2Q9NTI2 1148 aa12.75□□□□□ -0.37
SMPD4-211ENST00000449159 PHIPQ8WWQ0 1821 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 CCDC171Q6TFL3 1326 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 HIP1O00291 1037 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 APPP05067 770 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 GNAT2P19087 354 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 INPP5BP32019 993 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 LDLRAD1Q5T700 205 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-211ENST00000449159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMPD4-211ENST00000449159 ZKSCAN4Q969J2 545 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-211ENST00000449159 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 HOOK2Q96ED9 719 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 WRNIP1Q96S55 665 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 ZIC5Q96T25 663 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 ZNF341Q9BYN7 854 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMPD4-211ENST00000449159 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
SMPD4-211ENST00000449159 PHF20L1A8MW92 1017 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
SMPD4-211ENST00000449159 USP17L12C9JPN9 530 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 USP17L21D6R901 530 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 POLR3DP05423 398 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-211ENST00000449159 HLA-DOAP06340 250 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 SLC10A3P09131 477 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
SMPD4-211ENST00000449159 TDO2P48775 406 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 ZNF157P51786 506 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-211ENST00000449159 MAP3K10Q02779 954 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 VGLL4Q14135 290 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 RRP1BQ14684 758 aaKnown RBP12.73□□□□□ -0.37
SMPD4-211ENST00000449159 CTR9Q6PD62 1173 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
SMPD4-211ENST00000449159 IFNL3Q8IZI9 196 aa12.73□□□□□ -0.37
SMPD4-211ENST00000449159 PTPRFP10586 1907 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 HSPD1P10809 573 aaKnown RBP12.72□□□□□ -0.37
SMPD4-211ENST00000449159 MAP3K9P80192 1104 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 SHROOM1Q2M3G4 852 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-211ENST00000449159 C12orf60Q5U649 245 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 GIMAP6Q6P9H5 292 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 TTC6Q86TZ1 520 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 RASAL3Q86YV0 1011 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 CRACR2BQ8N4Y2 399 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-211ENST00000449159 SLC44A5Q8NCS7 719 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 DYNLL2Q96FJ2 89 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 EHD4Q9H223 541 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 ELP3Q9H9T3 547 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-211ENST00000449159 ARPP21Q9UBL0 812 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-211ENST00000449159 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
SMPD4-211ENST00000449159 ZNF112Q9UJU3 913 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 SNCAIPQ9Y6H5 919 aa12.72□□□□□ -0.37
SMPD4-211ENST00000449159 MINDY4BA8MYZ0 360 aa12.71□□□□□ -0.37
SMPD4-211ENST00000449159 TBC1D12O60347 775 aa12.71□□□□□ -0.37
SMPD4-211ENST00000449159 JAG1P78504 1218 aa12.71□□□□□ -0.37
SMPD4-211ENST00000449159 KIF23Q02241 960 aaPredicted RBP12.71□□□□□ -0.37
SMPD4-211ENST00000449159 GABPAQ06546 454 aa12.71□□□□□ -0.37
SMPD4-211ENST00000449159 STK11IPQ8N1F8 1099 aa12.71□□□□□ -0.37
SMPD4-211ENST00000449159 NAPBQ9H115 298 aa12.71□□□□□ -0.37
SMPD4-211ENST00000449159 SERPINB13Q9UIV8 391 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms