RNA–Protein interactions for RNA: ENST00000448828.5

NME4-206, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 2

Gene NME4, Length 1,167 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-206ENST00000448828 CCDC84Q86UT8 332 aaPredicted RBP27.65■■■□□ 2.02
NME4-206ENST00000448828 DNAJC2Q99543 621 aaKnown RBP27.65■■■□□ 2.02
NME4-206ENST00000448828 PTPN22Q9Y2R2 807 aa27.65■■■□□ 2.02
NME4-206ENST00000448828 IGSF3O75054 1194 aa27.64■■■□□ 2.02
NME4-206ENST00000448828 PPP4CP60510 307 aa27.64■■■□□ 2.02
NME4-206ENST00000448828 SLC4A8Q2Y0W8 1093 aa27.64■■■□□ 2.02
NME4-206ENST00000448828 DHX36Q9H2U1 1008 aaKnown RBP27.64■■■□□ 2.02
NME4-206ENST00000448828 SAP30BPQ9UHR5 308 aaKnown RBP27.64■■■□□ 2.02
NME4-206ENST00000448828 CPA4Q9UI42 421 aa27.64■■■□□ 2.02
NME4-206ENST00000448828 FASTKD5Q7L8L6 764 aaKnown RBP27.63■■■□□ 2.01
NME4-206ENST00000448828 CRACR2BQ8N4Y2 399 aaPredicted RBP27.63■■■□□ 2.01
NME4-206ENST00000448828 PARK7Q99497 189 aaKnown RBP27.63■■■□□ 2.01
NME4-206ENST00000448828 PI4KBQ9UBF8 816 aa27.63■■■□□ 2.01
NME4-206ENST00000448828 AFG3L2Q9Y4W6 797 aa27.63■■■□□ 2.01
NME4-206ENST00000448828 CDK5RAP2Q96SN8 1893 aa27.63■■■□□ 2.01
NME4-206ENST00000448828 FOCADQ5VW36 1801 aa27.62■■■□□ 2.01
NME4-206ENST00000448828 A0A0G2JLL6 359 aaPredicted RBP27.62■■■□□ 2.01
NME4-206ENST00000448828 USP5P45974 858 aa27.62■■■□□ 2.01
NME4-206ENST00000448828 CAP1Q01518 475 aa27.62■■■□□ 2.01
NME4-206ENST00000448828 PRRT2Q7Z6L0 340 aaPredicted RBP27.62■■■□□ 2.01
NME4-206ENST00000448828 HERC5Q9UII4 1024 aaKnown RBP27.62■■■□□ 2.01
NME4-206ENST00000448828 LACTBP83111 547 aaPredicted RBP27.61■■■□□ 2.01
NME4-206ENST00000448828 MOGSQ13724 837 aa27.61■■■□□ 2.01
NME4-206ENST00000448828 TTF1Q15361 905 aaPredicted RBP27.61■■■□□ 2.01
NME4-206ENST00000448828 ARHGAP39Q9C0H5 1083 aa27.61■■■□□ 2.01
NME4-206ENST00000448828 PALD1Q9ULE6 856 aa27.61■■■□□ 2.01
NME4-206ENST00000448828 ATAD5Q96QE3 1844 aa27.61■■■□□ 2.01
NME4-206ENST00000448828 ZSWIM8A7E2V4 1837 aa27.6■■■□□ 2.01
NME4-206ENST00000448828 HLA-DOAP06340 250 aa27.6■■■□□ 2.01
NME4-206ENST00000448828 GOLIM4O00461 696 aa27.59■■■□□ 2.01
NME4-206ENST00000448828 CYP2C8P10632 490 aa27.59■■■□□ 2.01
NME4-206ENST00000448828 GPAT2Q6NUI2 795 aa27.59■■■□□ 2.01
NME4-206ENST00000448828 CERS3Q8IU89 383 aa27.59■■■□□ 2.01
NME4-206ENST00000448828 YTHDC1Q96MU7 727 aaKnown RBP27.59■■■□□ 2.01
NME4-206ENST00000448828 SIPA1L1O43166 1804 aa27.59■■■□□ 2.01
NME4-206ENST00000448828 PHIPQ8WWQ0 1821 aa27.59■■■□□ 2.01
NME4-206ENST00000448828 CAP2P40123 477 aa27.58■■■□□ 2.01
NME4-206ENST00000448828 C17orf99Q6UX52 265 aa27.57■■■□□ 2
NME4-206ENST00000448828 LRRCC1Q9C099 1032 aa27.57■■■□□ 2
NME4-206ENST00000448828 PTCH2Q9Y6C5 1203 aa27.57■■■□□ 2
NME4-206ENST00000448828 PTPRFP10586 1907 aa27.57■■■□□ 2
NME4-206ENST00000448828 SPP2Q13103 211 aa27.56■■■□□ 2
NME4-206ENST00000448828 RRP1BQ14684 758 aaKnown RBP27.56■■■□□ 2
NME4-206ENST00000448828 SLC9C2Q5TAH2 1124 aa27.56■■■□□ 2
NME4-206ENST00000448828 SMCR8Q8TEV9 937 aaPredicted RBP27.56■■■□□ 2
NME4-206ENST00000448828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.56■■■□□ 2
NME4-206ENST00000448828 USP17L5A8MUK1 530 aa27.55■■■□□ 2
NME4-206ENST00000448828 SLC9C1Q4G0N8 1177 aa27.55■■■□□ 2
NME4-206ENST00000448828 ZNF280CQ8ND82 737 aa27.55■■■□□ 2
NME4-206ENST00000448828 BOLA2Q9H3K6 86 aa27.55■■■□□ 2
NME4-206ENST00000448828 AS3MTQ9HBK9 375 aa27.55■■■□□ 2
NME4-206ENST00000448828 ADGRA2Q96PE1 1338 aa27.55■■■□□ 2
NME4-206ENST00000448828 MAGEB6P1A0A0J9YX57 407 aa27.54■■■□□ 2
NME4-206ENST00000448828 SMARCA5O60264 1052 aaPredicted RBP27.54■■■□□ 2
NME4-206ENST00000448828 GDF11O95390 407 aa27.54■■■□□ 2
NME4-206ENST00000448828 FMNL1O95466 1100 aaPredicted RBP27.54■■■□□ 2
NME4-206ENST00000448828 PDE6AP16499 860 aa27.54■■■□□ 2
NME4-206ENST00000448828 PSMC4P43686 418 aa27.54■■■□□ 2
NME4-206ENST00000448828 TMED8Q6PL24 325 aaPredicted RBP27.54■■■□□ 2
NME4-206ENST00000448828 FOXP4Q8IVH2 680 aaPredicted RBP27.54■■■□□ 2
NME4-206ENST00000448828 EDC3Q96F86 508 aaKnown RBP27.54■■■□□ 2
NME4-206ENST00000448828 DNAJC18Q9H819 358 aa27.54■■■□□ 2
NME4-206ENST00000448828 AGTPBP1Q9UPW5 1226 aa27.54■■■□□ 2
NME4-206ENST00000448828 MYH1P12882 1939 aa27.53■■■□□ 2
NME4-206ENST00000448828 HMGCS2P54868 508 aa27.53■■■□□ 2
NME4-206ENST00000448828 TBC1D2Q9BYX2 928 aa27.53■■■□□ 2
NME4-206ENST00000448828 PAG1Q9NWQ8 432 aa27.53■■■□□ 2
NME4-206ENST00000448828 ZNF532Q9HCE3 1301 aa27.52■■■□□ 2
NME4-206ENST00000448828 ASNSP08243 561 aa27.52■■■□□ 2
NME4-206ENST00000448828 TREML2Q5T2D2 321 aa27.52■■■□□ 2
NME4-206ENST00000448828 SLC45A1Q9Y2W3 748 aa27.52■■■□□ 2
NME4-206ENST00000448828 MYCP01106 439 aaPredicted RBP27.51■■□□□ 1.99
NME4-206ENST00000448828 GNRH1P01148 92 aa27.51■■□□□ 1.99
NME4-206ENST00000448828 NBPF11Q86T75 865 aa27.51■■□□□ 1.99
NME4-206ENST00000448828 PROCA1Q8NCQ7 364 aaPredicted RBP27.51■■□□□ 1.99
NME4-206ENST00000448828 PNMA3Q9UL41 463 aa27.51■■□□□ 1.99
NME4-206ENST00000448828 NAV1Q8NEY1 1877 aa27.51■■□□□ 1.99
NME4-206ENST00000448828 ATP5JP18859 108 aa27.5■■□□□ 1.99
NME4-206ENST00000448828 ARMC5Q96C12 935 aa27.5■■□□□ 1.99
NME4-206ENST00000448828 TRIM47Q96LD4 638 aa27.5■■□□□ 1.99
NME4-206ENST00000448828 RIOK1Q9BRS2 568 aaKnown RBP27.5■■□□□ 1.99
NME4-206ENST00000448828 CRNKL1Q9BZJ0 848 aaKnown RBP27.5■■□□□ 1.99
NME4-206ENST00000448828 LOC285556D6RIA3 1793 aa27.5■■□□□ 1.99
NME4-206ENST00000448828 HOXD10P28358 340 aa27.49■■□□□ 1.99
NME4-206ENST00000448828 CTGFP29279 349 aa27.49■■□□□ 1.99
NME4-206ENST00000448828 FCGRTP55899 365 aa27.49■■□□□ 1.99
NME4-206ENST00000448828 MTMR2Q13614 643 aa27.49■■□□□ 1.99
NME4-206ENST00000448828 SHROOM1Q2M3G4 852 aaPredicted RBP27.49■■□□□ 1.99
NME4-206ENST00000448828 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.49■■□□□ 1.995e-7■■■□□ 15.7
NME4-206ENST00000448828 ZBTB21Q9ULJ3 1066 aa27.49■■□□□ 1.99
NME4-206ENST00000448828 POLR3DP05423 398 aaPredicted RBP27.48■■□□□ 1.99
NME4-206ENST00000448828 BCRP11274 1271 aa27.48■■□□□ 1.99
NME4-206ENST00000448828 RRP1P56182 461 aaKnown RBP27.48■■□□□ 1.99
NME4-206ENST00000448828 TTC6Q86TZ1 520 aa27.48■■□□□ 1.99
NME4-206ENST00000448828 METTL16Q86W50 562 aaKnown RBP27.48■■□□□ 1.99
NME4-206ENST00000448828 SH3TC2Q8TF17 1288 aa27.48■■□□□ 1.99
NME4-206ENST00000448828 SERPINB13Q9UIV8 391 aa27.48■■□□□ 1.99
NME4-206ENST00000448828 MYPNQ86TC9 1320 aa27.47■■□□□ 1.99
NME4-206ENST00000448828 POTEFA5A3E0 1075 aa27.47■■□□□ 1.99
NME4-206ENST00000448828 OSBPP22059 807 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms