RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 GPR161Q8N6U8 529 aaKnown RBP10.33□□□□□ -0.76
SMC6-207ENST00000448223 DDX17Q92841 729 aaKnown RBP10.33□□□□□ -0.76
SMC6-207ENST00000448223 SUFUQ9UMX1 484 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 CLTAP09496 248 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 MAGEA9P43362 315 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 TNNC1P63316 161 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 ERCC6LQ2NKX8 1250 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 PROSER2Q86WR7 435 aaPredicted RBP10.33□□□□□ -0.76
SMC6-207ENST00000448223 DBNDD2Q9BQY9 259 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 PLVAPQ9BX97 442 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 YY1AP1Q9H869 796 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 RASSF2P50749 326 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 VPS52Q8N1B4 723 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 TNRQ92752 1358 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 TSNARE1Q96NA8 513 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 RAB3IPQ96QF0 476 aaPredicted RBP10.33□□□□□ -0.76
SMC6-207ENST00000448223 MTRF1LQ9UGC7 380 aaKnown RBP10.33□□□□□ -0.76
SMC6-207ENST00000448223 CTNNA3Q9UI47 895 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 PPP1R9AQ9ULJ8 1098 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 ARHGAP31Q2M1Z3 1444 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 NR1I2O75469 434 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 EIF4A1P60842 406 aaKnown RBP10.33□□□□□ -0.76
SMC6-207ENST00000448223 IRX1P78414 480 aaPredicted RBP10.33□□□□□ -0.76
SMC6-207ENST00000448223 CBX8Q9HC52 389 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 CPS1P31327 1500 aa10.33□□□□□ -0.76
SMC6-207ENST00000448223 LMOD1P29536 600 aaPredicted RBP10.32□□□□□ -0.76
SMC6-207ENST00000448223 MARCKSP29966 332 aaPredicted RBP10.32□□□□□ -0.76
SMC6-207ENST00000448223 ATP5DP30049 168 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 NAA30Q147X3 362 aaPredicted RBP10.32□□□□□ -0.76
SMC6-207ENST00000448223 KANK3Q6NY19 840 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 ORAI2Q96SN7 254 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 THEGQ9P2T0 379 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 KIF20BQ96Q89 1820 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 IDH1O75874 414 aaKnown RBP10.32□□□□□ -0.76
SMC6-207ENST00000448223 TATP17735 454 aaPredicted RBP10.32□□□□□ -0.76
SMC6-207ENST00000448223 CCT5P48643 541 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 IRX5P78411 483 aaPredicted RBP10.32□□□□□ -0.76
SMC6-207ENST00000448223 SPAG1Q07617 926 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 FYB2Q5VWT5 728 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 CXorf38Q8TB03 319 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 FAN1Q9Y2M0 1017 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 BICDL2A1A5D9 508 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 HGSO14964 777 aaPredicted RBP10.32□□□□□ -0.76
SMC6-207ENST00000448223 ZNF589Q86UQ0 364 aaPredicted RBP10.32□□□□□ -0.76
SMC6-207ENST00000448223 HAUS1Q96CS2 278 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 MPHOSPH8Q99549 860 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 A0A1B0GVL5 298 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 ANKRD13DQ6ZTN6 518 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 ZNF594Q96JF6 807 aaPredicted RBP10.32□□□□□ -0.76
SMC6-207ENST00000448223 IFNKQ9P0W0 207 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 MTUS1Q9ULD2 1270 aa10.32□□□□□ -0.76
SMC6-207ENST00000448223 IFIT1P09914 478 aaKnown RBP10.31□□□□□ -0.76
SMC6-207ENST00000448223 BEND3Q5T5X7 828 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 CCDC62Q6P9F0 684 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 PI4K2BQ8TCG2 481 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 CAPS2Q9BXY5 557 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 TAF6LQ9Y6J9 622 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 NEO1Q92859 1461 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 GPTP24298 496 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 LCA5Q86VQ0 697 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 NAPGQ99747 312 aaPredicted RBP10.31□□□□□ -0.76
SMC6-207ENST00000448223 STAP2Q9UGK3 403 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 ATP2A1O14983 1001 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 TTC39AQ5SRH9 613 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 ZSCAN16Q9H4T2 348 aaPredicted RBP10.31□□□□□ -0.76
SMC6-207ENST00000448223 BAG1Q99933 345 aaPredicted RBP10.31□□□□□ -0.76
SMC6-207ENST00000448223 PPANQ9NQ55 473 aaKnown RBP10.31□□□□□ -0.76
SMC6-207ENST00000448223 SIGLEC1Q9BZZ2 1709 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 REREQ9P2R6 1566 aa10.31□□□□□ -0.76
SMC6-207ENST00000448223 KRT13P13646 458 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 PSMD2Q13200 908 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 ARID5BQ14865 1188 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 NAA16Q6N069 864 aaPredicted RBP10.3□□□□□ -0.76
SMC6-207ENST00000448223 MED4Q9NPJ6 270 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 DDX21Q9NR30 783 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMC6-207ENST00000448223 ZNF215Q9UL58 517 aaPredicted RBP10.3□□□□□ -0.76
SMC6-207ENST00000448223 MYCNP04198 464 aaPredicted RBP10.3□□□□□ -0.76
SMC6-207ENST00000448223 LEO1Q8WVC0 666 aaPredicted RBP10.3□□□□□ -0.76
SMC6-207ENST00000448223 CEP126Q9P2H0 1117 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 SCOCQ9UIL1 159 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 SPECC1L-ADORA2AF8WAN1 911 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 IRX4P78413 519 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 DYNC1I2Q13409 638 aaKnown RBP10.3□□□□□ -0.76
SMC6-207ENST00000448223 LINS1Q8NG48 757 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 FAM71BQ8TC56 605 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 EVA1CP58658 441 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 SLMAPQ14BN4 828 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 TERF2Q15554 542 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 SDCCAG8Q86SQ7 713 aaPredicted RBP10.3□□□□□ -0.76
SMC6-207ENST00000448223 CCDC63Q8NA47 563 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 CXorf56Q9H5V9 222 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 SSH2Q76I76 1423 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 PRPHP41219 470 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 SYKP43405 635 aa10.3□□□□□ -0.76
SMC6-207ENST00000448223 PAIP2BQ9ULR5 123 aaKnown RBP10.3□□□□□ -0.76
SMC6-207ENST00000448223 ELP1O95163 1332 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 GOLGA8BA8MQT2 603 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 ATP8B1O43520 1251 aa10.29□□□□□ -0.76
SMC6-207ENST00000448223 CHMP2AO43633 222 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms