RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 SLC51AQ86UW1 340 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 NOSTRINQ8IVI9 506 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 PPP1R13BQ96KQ4 1090 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 RAI14Q9P0K7 980 aa10.87□□□□□ -0.67
KLHL3-202ENST00000447439 POLR2DO15514 142 aaKnown RBP10.86□□□□□ -0.67
KLHL3-202ENST00000447439 FMNL1O95466 1100 aaPredicted RBP10.86□□□□□ -0.67
KLHL3-202ENST00000447439 SFPQP23246 707 aaKnown RBP eCLIP10.86□□□□□ -0.67
KLHL3-202ENST00000447439 EIF5P55010 431 aaKnown RBP10.86□□□□□ -0.67
KLHL3-202ENST00000447439 EARS2Q5JPH6 523 aaKnown RBP10.86□□□□□ -0.67
KLHL3-202ENST00000447439 SGMS1Q86VZ5 419 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 FAM177A1Q8N128 213 aaPredicted RBP10.86□□□□□ -0.67
KLHL3-202ENST00000447439 VPS54Q9P1Q0 977 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 SERTAD1Q9UHV2 236 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 WNT7AO00755 349 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 KCNQ2O43526 872 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 MMP1P03956 469 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 UBASH3AP57075 661 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 ELF2Q15723 593 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 KRBA2Q6ZNG9 492 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 OSBPL5Q9H0X9 879 aaPredicted RBP10.86□□□□□ -0.67
KLHL3-202ENST00000447439 CABP5Q9NP86 173 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 CCDC87Q9NVE4 849 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 PAXBP1Q9Y5B6 917 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 ITGB4P16144 1822 aa10.86□□□□□ -0.67
KLHL3-202ENST00000447439 ERVV-1B6SEH8 477 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 PPP6R2O75170 966 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 CAMTA2O94983 1202 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 KLRK1P26718 216 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 IGHMBP2P38935 993 aaKnown RBP10.85□□□□□ -0.67
KLHL3-202ENST00000447439 FMR1Q06787 632 aaKnown RBP eCLIP10.85□□□□□ -0.67
KLHL3-202ENST00000447439 TUBE1Q9UJT0 475 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 ZHX1Q9UKY1 873 aaPredicted RBP10.85□□□□□ -0.67
KLHL3-202ENST00000447439 NEMFO60524 1076 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 PPARAQ07869 468 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 ZNF654Q8IZM8 581 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 KRI1Q8N9T8 703 aaKnown RBP10.85□□□□□ -0.67
KLHL3-202ENST00000447439 BPIFA3Q9BQP9 254 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 INTS13Q9NVM9 706 aa10.85□□□□□ -0.67
KLHL3-202ENST00000447439 NMT2O60551 498 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 PLEKHA8P1O95397 391 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 IFNAR1P17181 557 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 LIFRP42702 1097 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 GSDMDP57764 484 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 TPM4P67936 248 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 MYL5Q02045 173 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 JMYQ8N9B5 988 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 STAMQ92783 540 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 UBAC1Q9BSL1 405 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 FBXO2Q9UK22 296 aaPredicted RBP10.84□□□□□ -0.67
KLHL3-202ENST00000447439 MAN1B1Q9UKM7 699 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 LOC102724428A0A0B4J2F2 783 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 ERICH2A1L162 156 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 NUTM2BA6NNL0 878 aaPredicted RBP10.84□□□□□ -0.67
KLHL3-202ENST00000447439 NUTM2EB1AL46 878 aaPredicted RBP10.84□□□□□ -0.67
KLHL3-202ENST00000447439 CUTAO60888 179 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 NTSR2O95665 410 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 SIK1P57059 783 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 ALX1Q15699 326 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 ERFEQ4G0M1 354 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 CCDC152Q4G0S7 254 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 NUTM2AQ8IVF1 878 aaPredicted RBP10.84□□□□□ -0.67
KLHL3-202ENST00000447439 CRACR2BQ8N4Y2 399 aaPredicted RBP10.84□□□□□ -0.67
KLHL3-202ENST00000447439 FANCBQ8NB91 859 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 STAG1Q8WVM7 1258 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 NACAP1Q9BZK3 213 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 KRT23Q9C075 422 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 CSRNP2Q9H175 543 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 TNKSO95271 1327 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 DISP2A7MBM2 1401 aa10.84□□□□□ -0.67
KLHL3-202ENST00000447439 ADAMTS3O15072 1205 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 AFMP43652 599 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 OLFM4Q6UX06 510 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 HOMER1Q86YM7 354 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 TRIM22Q8IYM9 498 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 NUP98P52948 1817 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 ANKRD36CQ5JPF3 1778 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 A0A087X0B3 334 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 FANCGO15287 622 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 STX17P56962 302 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 SAFBQ15424 915 aaKnown RBP eCLIP10.83□□□□□ -0.68
KLHL3-202ENST00000447439 KMT5BQ4FZB7 885 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 SMYD4Q8IYR2 804 aaPredicted RBP10.83□□□□□ -0.68
KLHL3-202ENST00000447439 MARCH10Q8NA82 808 aaPredicted RBP10.83□□□□□ -0.68
KLHL3-202ENST00000447439 KIF18AQ8NI77 898 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 EPSTI1Q96J88 318 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 CNNM2Q9H8M5 875 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 IMPACTQ9P2X3 320 aa10.83□□□□□ -0.68
KLHL3-202ENST00000447439 MAGEB6P1A0A0J9YX57 407 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 ZSCAN20P17040 1043 aaPredicted RBP10.82□□□□□ -0.68
KLHL3-202ENST00000447439 ADKP55263 362 aaKnown RBP10.82□□□□□ -0.68
KLHL3-202ENST00000447439 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
KLHL3-202ENST00000447439 POSTNQ15063 836 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 DDB1Q16531 1140 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 KLHL10Q6JEL2 608 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 CCDC150Q8NCX0 1101 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 ZNF384Q8TF68 577 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 DHX58Q96C10 678 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 TIGD1Q96MW7 591 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 MED15Q96RN5 788 aa10.82□□□□□ -0.68
KLHL3-202ENST00000447439 SAMSN1Q9NSI8 373 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms