RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 FAM161BQ96MY7 647 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 CDX2Q99626 313 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 IDI2Q9BXS1 227 aa8.9□□□□□ -0.98
LRRC28-203ENST00000447360 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-203ENST00000447360 ALPK3Q96L96 1907 aa8.9□□□□□ -0.99
LRRC28-203ENST00000447360 PRKAR2AP13861 404 aaKnown RBP8.89□□□□□ -0.99
LRRC28-203ENST00000447360 FGFR2P21802 821 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 DIXDC1Q155Q3 683 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 LRRC26Q2I0M4 334 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 LHX8Q68G74 356 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 TRIB2Q92519 343 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 SUCLG2Q96I99 432 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 LBHD1Q9BQE6 289 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-203ENST00000447360 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 SRCIN1Q9C0H9 1055 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 SEMA6BQ9H3T3 888 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 MGAMO43451 1857 aa8.89□□□□□ -0.99
LRRC28-203ENST00000447360 UTYO14607 1347 aa8.88□□□□□ -0.99
LRRC28-203ENST00000447360 LDHBP07195 334 aaKnown RBP8.88□□□□□ -0.99
LRRC28-203ENST00000447360 PRDX5P30044 214 aa8.88□□□□□ -0.99
LRRC28-203ENST00000447360 RGS3P49796 1198 aa8.88□□□□□ -0.99
LRRC28-203ENST00000447360 SH3BP5LQ7L8J4 393 aa8.88□□□□□ -0.99
LRRC28-203ENST00000447360 ZSCAN29Q8IWY8 852 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-203ENST00000447360 SOCS4Q8WXH5 440 aa8.88□□□□□ -0.99
LRRC28-203ENST00000447360 LPIN2Q92539 896 aa8.88□□□□□ -0.99
LRRC28-203ENST00000447360 NUDT12Q9BQG2 462 aa8.88□□□□□ -0.99
LRRC28-203ENST00000447360 MORF4L1Q9UBU8 362 aa8.88□□□□□ -0.99
LRRC28-203ENST00000447360 SALL1Q9NSC2 1324 aa8.87□□□□□ -0.99
LRRC28-203ENST00000447360 ZNF316A6NFI3 1004 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-203ENST00000447360 TBC1D12O60347 775 aa8.87□□□□□ -0.99
LRRC28-203ENST00000447360 NBPF7P0C2Y1 421 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-203ENST00000447360 SLC5A1P13866 664 aa8.87□□□□□ -0.99
LRRC28-203ENST00000447360 CYP2B6P20813 491 aa8.87□□□□□ -0.99
LRRC28-203ENST00000447360 COL9A1P20849 921 aa8.87□□□□□ -0.99
LRRC28-203ENST00000447360 CACNB2Q08289 660 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-203ENST00000447360 SPP2Q13103 211 aa8.87□□□□□ -0.99
LRRC28-203ENST00000447360 ZNF280CQ8ND82 737 aa8.87□□□□□ -0.99
LRRC28-203ENST00000447360 ASCC2Q9H1I8 757 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-203ENST00000447360 BICC1Q9H694 974 aaKnown RBP8.87□□□□□ -0.99
LRRC28-203ENST00000447360 FANCIQ9NVI1 1328 aa8.86□□□□□ -0.99
LRRC28-203ENST00000447360 DDTLA6NHG4 134 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-203ENST00000447360 ZKSCAN1P17029 563 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-203ENST00000447360 SMAD3P84022 425 aaKnown RBP8.86□□□□□ -0.99
LRRC28-203ENST00000447360 CCDC184Q52MB2 194 aa8.86□□□□□ -0.99
LRRC28-203ENST00000447360 SH3D19Q5HYK7 790 aa8.86□□□□□ -0.99
LRRC28-203ENST00000447360 SLC4A10Q6U841 1118 aa8.86□□□□□ -0.99
LRRC28-203ENST00000447360 FAM163AQ96GL9 167 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-203ENST00000447360 OSBPL5Q9H0X9 879 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-203ENST00000447360 GNL3LQ9NVN8 582 aaKnown RBP8.86□□□□□ -0.99
LRRC28-203ENST00000447360 PRKAG2Q9UGJ0 569 aa8.86□□□□□ -0.99
LRRC28-203ENST00000447360 RFX7Q2KHR2 1363 aa8.86□□□□□ -0.99
LRRC28-203ENST00000447360 GAKO14976 1311 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 TNFRSF10AO00220 468 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 SEMA3EO15041 775 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 MAPK4P31152 587 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 HMGCS2P54868 508 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 PDE3AQ14432 1141 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 TJAP1Q5JTD0 557 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 CCDC84Q86UT8 332 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-203ENST00000447360 SLF2Q8IX21 1173 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 ZGPATQ8N5A5 531 aaKnown RBP8.85□□□□□ -0.99
LRRC28-203ENST00000447360 ANKRD44Q8N8A2 993 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 GPRC5AQ8NFJ5 357 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 USP6NLQ92738 828 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 SENP6Q9GZR1 1112 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-203ENST00000447360 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-203ENST00000447360 DENND2AQ9ULE3 1009 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 DDX60LQ5H9U9 1706 aaKnown RBP8.85□□□□□ -0.99
LRRC28-203ENST00000447360 DOCK3Q8IZD9 2030 aa8.85□□□□□ -0.99
LRRC28-203ENST00000447360 TMEM265A0A087WTH1 108 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 USP17L5A8MUK1 530 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 EYA2O00167 538 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 TULP1O00294 542 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-203ENST00000447360 MSCO60682 206 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 SLURP2P0DP57 97 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 FOSL2P15408 326 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 CCND3P30281 292 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-203ENST00000447360 HOXA7P31268 230 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-203ENST00000447360 RGS2P41220 211 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 IRX3P78415 501 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-203ENST00000447360 EXOSC9Q06265 439 aaKnown RBP8.84□□□□□ -0.99
LRRC28-203ENST00000447360 SHHQ15465 462 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 KLHDC4Q8TBB5 520 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 MYLIPQ8WY64 445 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 TTYH1Q9H313 450 aaPredicted RBP8.84□□□□□ -0.99
LRRC28-203ENST00000447360 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.84□□□□□ -0.99
LRRC28-203ENST00000447360 AS3MTQ9HBK9 375 aa8.84□□□□□ -0.99
LRRC28-203ENST00000447360 DDX4Q9NQI0 724 aaKnown RBP8.84□□□□□ -0.99
LRRC28-203ENST00000447360 BDP1A6H8Y1 2624 aa8.84□□□□□ -1
LRRC28-203ENST00000447360 DNM1LO00429 736 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 MAP4K4O95819 1239 aaPredicted RBP8.83□□□□□ -1
LRRC28-203ENST00000447360 CAP2P40123 477 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 BACE1P56817 501 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 HERVK_113P62684 666 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 PICALMQ13492 652 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 MORN1Q5T089 497 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 DZIP1Q86YF9 867 aaKnown RBP8.83□□□□□ -1
LRRC28-203ENST00000447360 WDR63Q8IWG1 891 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 CCAR1Q8IX12 1150 aaKnown RBP8.83□□□□□ -1
LRRC28-203ENST00000447360 GTF3C2Q8WUA4 911 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms