RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 CDC25BP30305 580 aa12.89□□□□□ -0.35
PTCH2-203ENST00000447098 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
PTCH2-203ENST00000447098 IFNKQ9P0W0 207 aa12.89□□□□□ -0.35
PTCH2-203ENST00000447098 CFAP100Q494V2 611 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 ST7Q9NRC1 585 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
PTCH2-203ENST00000447098 CYP2D7A0A087X1C5 515 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 MYO1BO43795 1136 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 IFNL3Q8IZI9 196 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 TMX1Q9H3N1 280 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 SPATA31A6Q5VVP1 1343 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 UBE4AQ14139 1066 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
PTCH2-203ENST00000447098 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
PTCH2-203ENST00000447098 CLEC4GQ6UXB4 293 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
PTCH2-203ENST00000447098 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 MAP4K1Q92918 833 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 KAZALD1Q96I82 304 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 HDAC9Q9UKV0 1011 aa12.88□□□□□ -0.35
PTCH2-203ENST00000447098 TPM1P09493 284 aa12.87□□□□□ -0.35
PTCH2-203ENST00000447098 PDE6BP35913 854 aa12.87□□□□□ -0.35
PTCH2-203ENST00000447098 ZBTB7AO95365 584 aa12.87□□□□□ -0.35
PTCH2-203ENST00000447098 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
PTCH2-203ENST00000447098 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
PTCH2-203ENST00000447098 ZMYM1Q5SVZ6 1142 aa12.87□□□□□ -0.35
PTCH2-203ENST00000447098 TXLNBQ8N3L3 684 aa12.87□□□□□ -0.35
PTCH2-203ENST00000447098 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
PTCH2-203ENST00000447098 ADD1P35611 737 aaKnown RBP12.87□□□□□ -0.35
PTCH2-203ENST00000447098 PRKG1Q13976 671 aa12.87□□□□□ -0.35
PTCH2-203ENST00000447098 PGBD1Q96JS3 809 aa12.87□□□□□ -0.35
PTCH2-203ENST00000447098 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
PTCH2-203ENST00000447098 CAMTA2O94983 1202 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 NECTIN1Q15223 517 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 ATG9AQ7Z3C6 839 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 DSCC1Q9BVC3 393 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 KNDC1Q76NI1 1749 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 PLCG2P16885 1265 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
PTCH2-203ENST00000447098 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 LEKR1Q6ZMV7 388 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 TMTC2Q8N394 836 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 ANKRD20A12PQ8NF67 263 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 LCORLQ8N3X6 602 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 MRPS27Q92552 414 aaKnown RBP12.86□□□□□ -0.35
PTCH2-203ENST00000447098 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
PTCH2-203ENST00000447098 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.86□□□□□ -0.35
PTCH2-203ENST00000447098 PATL2C9JE40 543 aaKnown RBP12.85□□□□□ -0.35
PTCH2-203ENST00000447098 PPEF1O14829 653 aaPredicted RBP12.85□□□□□ -0.35
PTCH2-203ENST00000447098 TFAP4Q01664 338 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 AKNAD1Q5T1N1 836 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
PTCH2-203ENST00000447098 GPCPD1Q9NPB8 672 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 XDHP47989 1333 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 PRDX5P30044 214 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 FLAD1Q8NFF5 587 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 NEK11Q8NG66 645 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 UIMC1Q96RL1 719 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 NRXN3Q9Y4C0 1643 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 A0A1B0GVL5 298 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 ZSCAN12O43309 604 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 CBFA2T2O43439 604 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 LMAN1P49257 510 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 PPARAQ07869 468 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 V9GY48 417 aaPredicted RBP12.85□□□□□ -0.35
PTCH2-203ENST00000447098 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
PTCH2-203ENST00000447098 TSR1Q2NL82 804 aaKnown RBP12.85□□□□□ -0.35
PTCH2-203ENST00000447098 TMEM51Q9NW97 253 aa12.85□□□□□ -0.35
PTCH2-203ENST00000447098 RGPD8O14715 1765 aaPredicted RBP12.85□□□□□ -0.35
PTCH2-203ENST00000447098 CLCN6P51797 869 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 KRBA2Q6ZNG9 492 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
PTCH2-203ENST00000447098 USP40Q9NVE5 1235 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 TOP1P11387 765 aaKnown RBP12.84□□□□□ -0.35
PTCH2-203ENST00000447098 CASQ1P31415 396 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 RABL6Q3YEC7 729 aaPredicted RBP12.84□□□□□ -0.35
PTCH2-203ENST00000447098 HSP90AA4PQ58FG1 418 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
PTCH2-203ENST00000447098 CARD6Q9BX69 1037 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 FTOQ9C0B1 505 aaKnown RBP eCLIP12.84□□□□□ -0.35
PTCH2-203ENST00000447098 ATP2B4P23634 1241 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 ADD2P35612 726 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 NAPAP54920 295 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 HNRNPH2P55795 449 aaKnown RBP12.84□□□□□ -0.35
PTCH2-203ENST00000447098 GNG11P61952 73 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
PTCH2-203ENST00000447098 SARM1Q6SZW1 724 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 IMPACTQ9P2X3 320 aa12.84□□□□□ -0.35
PTCH2-203ENST00000447098 UBN2Q6ZU65 1347 aa12.83□□□□□ -0.35
PTCH2-203ENST00000447098 CNNM3Q8NE01 707 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 SLC4A9Q96Q91 983 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 ARFGAP3Q9NP61 516 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 KCNJ14Q9UNX9 436 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 RAD17O75943 681 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 TUBB4AP04350 444 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 BTDP43251 543 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms