RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 ATG3Q9NT62 314 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 IGSF1Q8N6C5 1336 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 ZBED4O75132 1171 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 GNG11P61952 73 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 PRPF4BQ13523 1007 aaKnown RBP7.88□□□□□ -1.15
CDK12-202ENST00000447079 CNKSR1Q969H4 720 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 IWS1Q96ST2 819 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 CCDC77Q9BR77 488 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 MED23Q9ULK4 1368 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 ADCY7P51828 1080 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 RSRC1Q96IZ7 334 aaKnown RBP7.88□□□□□ -1.15
CDK12-202ENST00000447079 LGR6Q9HBX8 967 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 STX10O60499 249 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 CCNT1O60563 726 aaKnown RBP7.88□□□□□ -1.15
CDK12-202ENST00000447079 SYT1P21579 422 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 RPS8P62241 208 aaKnown RBP7.88□□□□□ -1.15
CDK12-202ENST00000447079 WDR44Q5JSH3 913 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 SUCLG2Q96I99 432 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 ZNF496Q96IT1 587 aaPredicted RBP7.88□□□□□ -1.15
CDK12-202ENST00000447079 CCDC42Q96M95 316 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 TCHPQ9BT92 498 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 NT5C3AQ9H0P0 336 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 IQGAP1P46940 1657 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 SLC1A4P43007 532 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 UBXN1Q04323 297 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 FAM196AQ6ZSG2 479 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 AOPEPQ8N6M6 819 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 SSH3Q8TE77 659 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 RRAGDQ9NQL2 400 aaPredicted RBP7.88□□□□□ -1.15
CDK12-202ENST00000447079 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDK12-202ENST00000447079 METP08581 1390 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 GNA14O95837 355 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 HOXA7P31268 230 aaPredicted RBP7.88□□□□□ -1.15
CDK12-202ENST00000447079 PABPC4Q13310 644 aaKnown RBP eCLIP7.88□□□□□ -1.152e-7■■■□□ 17.4
CDK12-202ENST00000447079 G2E3Q7L622 706 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 CSRNP2Q9H175 543 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 CPSF1Q10570 1443 aaKnown RBP7.88□□□□□ -1.15
CDK12-202ENST00000447079 WDR17Q8IZU2 1322 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 ANO1Q5XXA6 986 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 RAB11FIP4Q86YS3 637 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 CCDC113Q9H0I3 377 aa7.88□□□□□ -1.15
CDK12-202ENST00000447079 KDM2BQ8NHM5 1336 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 ERCC6L2Q5T890 1561 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 H7C1D1 291 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 BACH1O14867 736 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 MYL5Q02045 173 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 MSL1Q68DK7 614 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 NBPF11Q86T75 865 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 NUCKS1Q9H1E3 243 aaKnown RBP7.87□□□□□ -1.15
CDK12-202ENST00000447079 BCORL1Q5H9F3 1711 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 ATP2A2P16615 1042 aaKnown RBP7.87□□□□□ -1.15
CDK12-202ENST00000447079 NLGN1Q8N2Q7 840 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 KIAA1524Q8TCG1 905 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 HAUS7Q99871 368 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 SWAP70Q9UH65 585 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 KRT24Q2M2I5 525 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 VTI1AQ96AJ9 217 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 ZNF274Q96GC6 653 aaPredicted RBP7.87□□□□□ -1.15
CDK12-202ENST00000447079 NSRP1Q9H0G5 558 aaKnown RBP7.87□□□□□ -1.15
CDK12-202ENST00000447079 LEMD3Q9Y2U8 911 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 IVNS1ABPQ9Y6Y0 642 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 ZNF532Q9HCE3 1301 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 CTAGE15A4D2H0 777 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 B4E1Z4 1266 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 CTAGE8P0CG41 777 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 FERP16591 822 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 CCT6AP40227 531 aaKnown RBP7.87□□□□□ -1.15
CDK12-202ENST00000447079 CTAGE6Q86UF2 777 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 CTAGE4Q8IX94 777 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 CHURC1Q8WUH1 139 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 ZFP91Q96JP5 570 aaPredicted RBP7.87□□□□□ -1.15
CDK12-202ENST00000447079 PAIP2Q9BPZ3 127 aaKnown RBP7.87□□□□□ -1.15
CDK12-202ENST00000447079 ARMT1Q9H993 441 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 AATFQ9NY61 560 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDK12-202ENST00000447079 IMPACTQ9P2X3 320 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 LUC7L2Q9Y383 392 aaKnown RBP7.87□□□□□ -1.15
CDK12-202ENST00000447079 KIDINS220Q9ULH0 1771 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 OPA1O60313 960 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 SKILP12757 684 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 STRN3Q13033 797 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 HOMER2Q9NSB8 354 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 MRVI1Q9Y6F6 885 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 TIMM10P62072 90 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 DNAJC10Q8IXB1 793 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 PPM1EQ8WY54 764 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 DBNDD2Q9BQY9 259 aa7.87□□□□□ -1.15
CDK12-202ENST00000447079 ERVV-1B6SEH8 477 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 GAS8O95995 478 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 A1BGP04217 495 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 CALCRLQ16602 461 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 GRIPAP1Q4V328 841 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 HACE1Q8IYU2 909 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 OTUD6BQ8N6M0 293 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 MLKLQ8NB16 471 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 ABCD1P33897 745 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 AKNAD1Q5T1N1 836 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 C6orf163Q5TEZ5 329 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 FCHSD1Q86WN1 690 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 MTUS1Q9ULD2 1270 aa7.86□□□□□ -1.15
CDK12-202ENST00000447079 DIP2CQ9Y2E4 1556 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms