RNA–Protein interactions for RNA: ENST00000446488.7

NFRKB-201, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 5,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-201ENST00000446488 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.42
NFRKB-201ENST00000446488 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
NFRKB-201ENST00000446488 CTAGE6Q86UF2 777 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 CTAGE4Q8IX94 777 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 CEP112Q8N8E3 955 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 SLC10A4Q96EP9 437 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 HOMER2Q9NSB8 354 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 RRAGBQ5VZM2 374 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 DTHD1Q6ZMT9 781 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 DPP9Q86TI2 863 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 PLEKHM2Q8IWE5 1019 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 KIFC2Q96AC6 838 aa12.4□□□□□ -0.42
NFRKB-201ENST00000446488 GYG1P46976 350 aa12.4□□□□□ -0.43
NFRKB-201ENST00000446488 MNAT1P51948 309 aa12.4□□□□□ -0.43
NFRKB-201ENST00000446488 RNF181Q9P0P0 153 aa12.4□□□□□ -0.43
NFRKB-201ENST00000446488 BTDP43251 543 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 GABPB1Q06547 395 aaPredicted RBP12.39□□□□□ -0.43
NFRKB-201ENST00000446488 DYDC1Q8WWB3 177 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 GOLGA1Q92805 767 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 GINS2Q9Y248 185 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 ZNF532Q9HCE3 1301 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 RIMBP3CA6NJZ7 1639 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 RIMBP3BA6NNM3 1639 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 RIMBP3Q9UFD9 1639 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 CREB3L3Q68CJ9 461 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 MCF2L2Q86YR7 1114 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 ANKRD35Q8N283 1001 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 AOPEPQ8N6M6 819 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 ERO1AQ96HE7 468 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 CCDC17Q96LX7 622 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.39□□□□□ -0.43
NFRKB-201ENST00000446488 SYNMO15061 1565 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 KCNQ3O43525 872 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 SYKP43405 635 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 SLC8A3P57103 927 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 IFFO1Q0D2I5 559 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 GRAPQ13588 217 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 GRAPLQ8TC17 118 aaPredicted RBP12.39□□□□□ -0.43
NFRKB-201ENST00000446488 ZKSCAN3Q9BRR0 538 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 ZSWIM4Q9H7M6 989 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 PSMA7O14818 248 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 RAD17O75943 681 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 SYT1P21579 422 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 ZAP70P43403 619 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 ADCY7P51828 1080 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 NCAPG2Q86XI2 1143 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 ZNF354CQ86Y25 554 aa12.39□□□□□ -0.43
NFRKB-201ENST00000446488 AOX1Q06278 1338 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 PRR36Q9H6K5 1346 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 B4E1Z4 1266 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 ZBTB24O43167 697 aaPredicted RBP12.38□□□□□ -0.43
NFRKB-201ENST00000446488 KCNQ4P56696 695 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 DBNDD1Q9H9R9 158 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 GCC2Q8IWJ2 1684 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 MYO3BQ8WXR4 1341 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
NFRKB-201ENST00000446488 USP17L3A6NCW0 530 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 USP17L4A6NCW7 530 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 PPFIA3O75145 1194 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 PRDM1O75626 825 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 CFBP00751 764 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 ACTN2P35609 894 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 USP17L1Q7RTZ2 530 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 CTAGE1Q96RT6 745 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 MLXIPQ9HAP2 919 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 NARFQ9UHQ1 456 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 MRPL11Q9Y3B7 192 aaKnown RBP12.38□□□□□ -0.43
NFRKB-201ENST00000446488 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.38□□□□□ -0.435e-7■■■■□ 19.9
NFRKB-201ENST00000446488 HEG1Q9ULI3 1381 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 ZEB2O60315 1214 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 NR1I2O75469 434 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 TFAP4Q01664 338 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 STRN3Q13033 797 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 TCEANC2Q96MN5 208 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 SPAG5Q96R06 1193 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 MMRN2Q9H8L6 949 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.38□□□□□ -0.43
NFRKB-201ENST00000446488 RSPH14Q9UHP6 348 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 V9GYY5 206 aaPredicted RBP12.38□□□□□ -0.43
NFRKB-201ENST00000446488 MACROD2A1Z1Q3 448 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 DEXIO95424 95 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 TUBBP07437 444 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 ICA1Q05084 483 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 HOOK3Q86VS8 718 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 CEP83Q9Y592 693 aa12.38□□□□□ -0.43
NFRKB-201ENST00000446488 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 C21orf2O43822 256 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 EXOC7Q9UPT5 735 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 FLOT1O75955 427 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 MCM6Q14566 821 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 LETM2Q2VYF4 491 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 GLG1Q92896 1179 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 SRP68Q9UHB9 627 aaKnown RBP12.37□□□□□ -0.43
NFRKB-201ENST00000446488 GOLGA6L10A0A0M3HER8 536 aa12.37□□□□□ -0.43
NFRKB-201ENST00000446488 GCOM1H8Y6P7 765 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms