RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 CCDC129Q6ZRS4 1044 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 MIGA1Q8NAN2 632 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 RNF25Q96BH1 459 aaPredicted RBP10.43□□□□□ -0.74
FXR1-203ENST00000445140 NAPBQ9H115 298 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 CNNM2Q9H8M5 875 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 DDX4Q9NQI0 724 aaKnown RBP10.43□□□□□ -0.74
FXR1-203ENST00000445140 NID2Q14112 1375 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 SLC27A2O14975 620 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 SLC3A2P08195 630 aaKnown RBP10.43□□□□□ -0.74
FXR1-203ENST00000445140 HMGB1P09429 215 aaKnown RBP10.43□□□□□ -0.74
FXR1-203ENST00000445140 VPS53Q5VIR6 699 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 CREB3L3Q68CJ9 461 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 TATDN1Q6P1N9 297 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 TBC1D2Q9BYX2 928 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 ANO2Q9NQ90 1003 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 TCP11L1Q9NUJ3 509 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 LOC285556D6RIA3 1793 aa10.43□□□□□ -0.74
FXR1-203ENST00000445140 PPARAQ07869 468 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 SLFNL1Q499Z3 407 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 CCDC178Q5BJE1 867 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 PI4KBQ9UBF8 816 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 ZNF112Q9UJU3 913 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 F8W031 263 aaPredicted RBP10.42□□□□□ -0.74
FXR1-203ENST00000445140 HLA-DOAP06340 250 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 USP5P45974 858 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 NOL9Q5SY16 702 aaKnown RBP10.42□□□□□ -0.74
FXR1-203ENST00000445140 ANKS1AQ92625 1134 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 TDRD3Q9H7E2 651 aaKnown RBP10.42□□□□□ -0.74
FXR1-203ENST00000445140 THSD7BQ9C0I4 1608 aa10.42□□□□□ -0.74
FXR1-203ENST00000445140 PRKAB2O43741 272 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 RCAN1P53805 252 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 FKBP1BP68106 108 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 NBPF9Q3BBW0 867 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 SH3BP5LQ7L8J4 393 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 TGFBRAP1Q8WUH2 860 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 CCDC17Q96LX7 622 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 AGXT2Q9BYV1 514 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 SHTN1A0MZ66 631 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 CYP21A2P08686 494 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 ZKSCAN1P17029 563 aaPredicted RBP10.41□□□□□ -0.74
FXR1-203ENST00000445140 TDO2P48775 406 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 NFIAQ12857 509 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 AKNAD1Q5T1N1 836 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 KRT23Q9C075 422 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 PTPRFP10586 1907 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 ZNF213O14771 459 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 SEC24BO95487 1268 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 EGFRP00533 1210 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 SAMD7Q7Z3H4 446 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 C22orf23Q9BZE7 217 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 SNX14Q9Y5W7 946 aa10.41□□□□□ -0.74
FXR1-203ENST00000445140 IGKV6D-41A0A0C4DH26 115 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 PSMA5P28066 241 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 RBM5P52756 815 aaKnown RBP eCLIP10.4□□□□□ -0.74
FXR1-203ENST00000445140 EVCP57679 992 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 TBC1D10BQ4KMP7 808 aaPredicted RBP10.4□□□□□ -0.74
FXR1-203ENST00000445140 DCAF15Q66K64 600 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 SDR42E1Q8WUS8 393 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 KIF2CQ99661 725 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 ZSWIM6Q9HCJ5 1215 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 GGA3Q9NZ52 723 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 PCDHAC2Q9Y5I4 1007 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 MYH4Q9Y623 1939 aa10.4□□□□□ -0.74
FXR1-203ENST00000445140 PDE4BQ07343 736 aa10.4□□□□□ -0.75
FXR1-203ENST00000445140 MB21D2Q8IYB1 491 aaPredicted RBP10.4□□□□□ -0.75
FXR1-203ENST00000445140 MCM9Q9NXL9 1143 aa10.4□□□□□ -0.75
FXR1-203ENST00000445140 SERPINB13Q9UIV8 391 aa10.4□□□□□ -0.75
FXR1-203ENST00000445140 PALD1Q9ULE6 856 aa10.4□□□□□ -0.75
FXR1-203ENST00000445140 USP17L12C9JPN9 530 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 USP17L21D6R901 530 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 RABEP1Q15276 862 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 SUPT20HL1Q3ZLR7 823 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 CDC37L1Q7L3B6 337 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 TBC1D10CQ8IV04 446 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 MAPKAPK5Q8IW41 473 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
FXR1-203ENST00000445140 DCPSQ96C86 337 aaKnown RBP10.39□□□□□ -0.75
FXR1-203ENST00000445140 PARP14Q460N5 1801 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 RASA3Q14644 834 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 ANGEL2Q5VTE6 544 aaKnown RBP10.39□□□□□ -0.75
FXR1-203ENST00000445140 DEFB129Q9H1M3 183 aa10.39□□□□□ -0.75
FXR1-203ENST00000445140 E7EWF7 191 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 SHMT1P34896 483 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 EXOSC10Q01780 885 aaKnown RBP10.38□□□□□ -0.75
FXR1-203ENST00000445140 NEDD1Q8NHV4 660 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 NCOA7Q8NI08 942 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 TMEM87BQ96K49 555 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 MAP3K14Q99558 947 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 PASKQ96RG2 1323 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 DDTLA6NHG4 134 aaPredicted RBP10.38□□□□□ -0.75
FXR1-203ENST00000445140 FSTL1Q12841 308 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 CHADLQ6NUI6 762 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 ZNF341Q9BYN7 854 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 DNAJC18Q9H819 358 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 A0A0G2JMZ2 1700 aa10.38□□□□□ -0.75
FXR1-203ENST00000445140 PHF20L1A8MW92 1017 aa10.37□□□□□ -0.75
FXR1-203ENST00000445140 POLR3DP05423 398 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms