RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 TRIM22Q8IYM9 498 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 ZNF654Q8IZM8 581 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 TDRD7Q8NHU6 1098 aaKnown RBP15.89■□□□□ 0.13
RBM39-216ENST00000444878 NUP133Q8WUM0 1156 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 WASF1Q92558 559 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 CLIC4Q9Y696 253 aa15.89■□□□□ 0.13
RBM39-216ENST00000444878 YEATS4O95619 227 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 GPSM2P81274 684 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 TYRO3Q06418 890 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 SEC23AQ15436 765 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 HS1BP3Q53T59 392 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 IQCA1Q86XH1 822 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 LINC00301Q8NCQ3 95 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 KCNG4Q8TDN1 519 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 PRDM1O75626 825 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 C15orf52Q6ZUT6 534 aaKnown RBP15.88■□□□□ 0.13
RBM39-216ENST00000444878 FANCBQ8NB91 859 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 ZSCAN10Q96SZ4 725 aaPredicted RBP15.88■□□□□ 0.13
RBM39-216ENST00000444878 PCDHA7Q9UN72 937 aa15.88■□□□□ 0.13
RBM39-216ENST00000444878 UFL1O94874 794 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 SLC3A2P08195 630 aaKnown RBP15.87■□□□□ 0.13
RBM39-216ENST00000444878 FGRP09769 529 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 ATP2B4P23634 1241 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 DDR1Q08345 913 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 ADALQ6DHV7 355 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 PROM2Q8N271 834 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 FSIP1Q8NA03 581 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 GPR101Q96P66 508 aaPredicted RBP15.87■□□□□ 0.13
RBM39-216ENST00000444878 ARPP21Q9UBL0 812 aaPredicted RBP15.87■□□□□ 0.13
RBM39-216ENST00000444878 USP25Q9UHP3 1055 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 GGA1Q9UJY5 639 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
RBM39-216ENST00000444878 POLRMTO00411 1230 aaKnown RBP15.86■□□□□ 0.13
RBM39-216ENST00000444878 SPTLC2O15270 562 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 BBOX1O75936 387 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 FAM160A1Q05DH4 1040 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 PPP2R5BQ15173 497 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 IFIT1BQ5T764 474 aaKnown RBP15.86■□□□□ 0.13
RBM39-216ENST00000444878 ANO1Q5XXA6 986 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 SASS6Q6UVJ0 657 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 ENAHQ8N8S7 591 aaPredicted RBP15.86■□□□□ 0.13
RBM39-216ENST00000444878 GOLPH3LQ9H4A5 285 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 MRVI1Q9Y6F6 885 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 CTAGE5O15320 804 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 KINO60870 393 aaKnown RBP15.86■□□□□ 0.13
RBM39-216ENST00000444878 CLCN1P35523 988 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 ZSCAN30Q86W11 494 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 CCDC82Q8N4S0 544 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 FAM200AQ8TCP9 573 aa15.86■□□□□ 0.13
RBM39-216ENST00000444878 MRPS27Q92552 414 aaKnown RBP15.86■□□□□ 0.13
RBM39-216ENST00000444878 UBE2Q2LH0YL09 131 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 DEXIO95424 95 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 GSTO1P78417 241 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 SNW1Q13573 536 aaKnown RBP15.85■□□□□ 0.13
RBM39-216ENST00000444878 SBK1Q52WX2 424 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 CATIPQ7Z7H3 387 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 CRACR2BQ8N4Y2 399 aaPredicted RBP15.85■□□□□ 0.13
RBM39-216ENST00000444878 A0A1W2PQ27 194 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 A0A1W2PQ64 194 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 A0A1W2PQD8 194 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 ORC4O43929 436 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
RBM39-216ENST00000444878 NBPF11Q86T75 865 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 CMTR1Q8N1G2 835 aaKnown RBP15.85■□□□□ 0.13
RBM39-216ENST00000444878 ENGASEQ8NFI3 743 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 CD209Q9NNX6 404 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 MCM9Q9NXL9 1143 aa15.85■□□□□ 0.13
RBM39-216ENST00000444878 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
RBM39-216ENST00000444878 BAG3O95817 575 aa15.84■□□□□ 0.13
RBM39-216ENST00000444878 MSNP26038 577 aaKnown RBP15.84■□□□□ 0.13
RBM39-216ENST00000444878 U2AF2P26368 475 aaKnown RBP eCLIP15.84■□□□□ 0.132e-8■■□□□ 13.9
RBM39-216ENST00000444878 GUCY1A2P33402 732 aa15.84■□□□□ 0.13
RBM39-216ENST00000444878 USP5P45974 858 aa15.84■□□□□ 0.13
RBM39-216ENST00000444878 RBM6P78332 1123 aaKnown RBP15.84■□□□□ 0.13
RBM39-216ENST00000444878 PDE4BQ07343 736 aa15.84■□□□□ 0.13
RBM39-216ENST00000444878 SAFBQ15424 915 aaKnown RBP eCLIP15.84■□□□□ 0.13
RBM39-216ENST00000444878 ANO6Q4KMQ2 910 aa15.84■□□□□ 0.13
RBM39-216ENST00000444878 CRAMP1Q96RY5 1269 aa15.84■□□□□ 0.13
RBM39-216ENST00000444878 NOL10Q9BSC4 688 aaKnown RBP15.84■□□□□ 0.13
RBM39-216ENST00000444878 CCDC39Q9UFE4 941 aa15.84■□□□□ 0.13
RBM39-216ENST00000444878 BAZ2BQ9UIF8 2168 aaKnown RBP15.83■□□□□ 0.13
RBM39-216ENST00000444878 ADCY5O95622 1261 aa15.83■□□□□ 0.13
RBM39-216ENST00000444878 PTMAP06454 111 aaKnown RBP15.83■□□□□ 0.13
RBM39-216ENST00000444878 LDHCP07864 332 aa15.83■□□□□ 0.13
RBM39-216ENST00000444878 EVX2Q03828 476 aa15.83■□□□□ 0.13
RBM39-216ENST00000444878 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.83■□□□□ 0.13
RBM39-216ENST00000444878 A0A1B0GVL5 298 aa15.83■□□□□ 0.12
RBM39-216ENST00000444878 CYP2D6P10635 497 aa15.83■□□□□ 0.12
RBM39-216ENST00000444878 AKAP17AQ02040 695 aaKnown RBP15.83■□□□□ 0.12
RBM39-216ENST00000444878 SLC39A14Q15043 492 aa15.83■□□□□ 0.12
RBM39-216ENST00000444878 DIXDC1Q155Q3 683 aa15.83■□□□□ 0.12
RBM39-216ENST00000444878 BBXQ8WY36 941 aaPredicted RBP15.83■□□□□ 0.12
RBM39-216ENST00000444878 ANKRD31Q8N7Z5 1873 aa15.83■□□□□ 0.12
RBM39-216ENST00000444878 NAV1Q8NEY1 1877 aa15.83■□□□□ 0.12
RBM39-216ENST00000444878 CDK5RAP2Q96SN8 1893 aa15.82■□□□□ 0.12
RBM39-216ENST00000444878 KLRG2A4D1S0 409 aaPredicted RBP15.82■□□□□ 0.12
RBM39-216ENST00000444878 MMP1P03956 469 aa15.82■□□□□ 0.12
RBM39-216ENST00000444878 USP17L8P0C7I0 530 aa15.82■□□□□ 0.12
RBM39-216ENST00000444878 CALM1P0DP23 149 aa15.82■□□□□ 0.12
RBM39-216ENST00000444878 CALM2P0DP24 149 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms