RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 DDX21Q9NR30 783 aaKnown RBP eCLIP5.74□□□□□ -1.49
SCN11A-202ENST00000444237 TCOF1Q13428 1488 aaKnown RBP5.74□□□□□ -1.49
SCN11A-202ENST00000444237 SHANK2Q9UPX8 1470 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 LMNAP02545 664 aaKnown RBP5.74□□□□□ -1.49
SCN11A-202ENST00000444237 EIF2S2P20042 333 aaKnown RBP5.74□□□□□ -1.49
SCN11A-202ENST00000444237 CUL4AQ13619 759 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 CFAP221Q4G0U5 840 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 HSP90AA4PQ58FG1 418 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 MFN1Q8IWA4 741 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 ITFG2Q969R8 447 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 RRP36Q96EU6 259 aaKnown RBP5.74□□□□□ -1.49
SCN11A-202ENST00000444237 CNOT10Q9H9A5 744 aaKnown RBP5.74□□□□□ -1.49
SCN11A-202ENST00000444237 RMI1Q9H9A7 625 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 WWC3Q9ULE0 1092 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 TNNQ9UQP3 1299 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 FHOD1Q9Y613 1164 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 MSH6P52701 1360 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 TPP2P29144 1249 aaPredicted RBP5.74□□□□□ -1.49
SCN11A-202ENST00000444237 NLRP6P59044 892 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 CCDC62Q6P9F0 684 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 RUFY3Q7L099 469 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 VPS52Q8N1B4 723 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 DDX54Q8TDD1 881 aaKnown RBP5.74□□□□□ -1.49
SCN11A-202ENST00000444237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.74□□□□□ -1.49
SCN11A-202ENST00000444237 GGNBP2Q9H3C7 697 aa5.74□□□□□ -1.49
SCN11A-202ENST00000444237 RNF8O76064 485 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 CD2BP2O95400 341 aaKnown RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 POLR3DP05423 398 aaPredicted RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 NR1D1P20393 614 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 PAX7P23759 505 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 MRPS35P82673 323 aaKnown RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 CFAP157Q5JU67 520 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 MLKLQ8NB16 471 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 B4GALNT2Q8NHY0 566 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 NECTIN2Q92692 538 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 HAUS4Q9H6D7 363 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 NSFL1CQ9UNZ2 370 aaKnown RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 ABCC1P33527 1531 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 POLD1P28340 1107 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 CTNNA1P35221 906 aaKnown RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 NNTQ13423 1086 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 TMED8Q6PL24 325 aaPredicted RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 ARHGAP22Q7Z5H3 698 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 ATP6V0A4Q9HBG4 840 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 ADGBQ8N7X0 1667 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 NSD3Q9BZ95 1437 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 ECM2O94769 699 aaPredicted RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 PRPF38AQ8NAV1 312 aaKnown RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 POLR3AO14802 1390 aaPredicted RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 MACROD2A1Z1Q3 448 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 SPECC1L-ADORA2AF8WAN1 911 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 ADAMTS2O95450 1211 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 BMP15O95972 392 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 PAPOLAP51003 745 aaKnown RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 SFSWAPQ12872 951 aaKnown RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 CCDC80Q76M96 950 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 TRIM47Q96LD4 638 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 NEUROD6Q96NK8 337 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 UIMC1Q96RL1 719 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 TXLNGQ9NUQ3 528 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 G3BP2Q9UN86 482 aaKnown RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 MAST1Q9Y2H9 1570 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 CHGBP05060 677 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 UBXN1Q04323 297 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 PRPF4BQ13523 1007 aaKnown RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 RRAGBQ5VZM2 374 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 EMBQ6PCB8 327 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 MORC4Q8TE76 937 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 OSBPL5Q9H0X9 879 aaPredicted RBP5.73□□□□□ -1.49
SCN11A-202ENST00000444237 ECHDC1Q9NTX5 307 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 RGL1Q9NZL6 768 aa5.73□□□□□ -1.49
SCN11A-202ENST00000444237 EIF3HO15372 352 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 ACTN4O43707 911 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 PPP1R21Q6ZMI0 780 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 ZNF653Q96CK0 615 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 THOC1Q96FV9 657 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 MOV10L1Q9BXT6 1211 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 NLRP2Q9NX02 1062 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 KIAA1468Q9P260 1216 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 TPCN1Q9ULQ1 816 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 RBM8AQ9Y5S9 174 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 A0A1B0GVL5 298 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 TPD52L2O43399 206 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 TCP1P17987 556 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 PSEN1P49768 467 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 SMTNP53814 917 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 CCT2P78371 535 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 TTC39AQ5SRH9 613 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 LARP1Q6PKG0 1096 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 AIDAQ96BJ3 306 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 HVCN1Q96D96 273 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 PLVAPQ9BX97 442 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 BMP2KQ9NSY1 1161 aaPredicted RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 MTUS1Q9ULD2 1270 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 MTMR6Q9Y217 621 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 UTP11Q9Y3A2 253 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.72□□□□□ -1.49
SCN11A-202ENST00000444237 GOLGA8BA8MQT2 603 aa5.72□□□□□ -1.49
SCN11A-202ENST00000444237 TXNDC9O14530 226 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms