RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.07■□□□□ 0.32
TREX1-202ENST00000444177 NDUFB9Q9Y6M9 179 aa17.07■□□□□ 0.32
TREX1-202ENST00000444177 ADGRA2Q96PE1 1338 aa17.06■□□□□ 0.32
TREX1-202ENST00000444177 FAM196BA6NMK8 535 aa17.06■□□□□ 0.32
TREX1-202ENST00000444177 ECM2O94769 699 aaPredicted RBP17.06■□□□□ 0.32
TREX1-202ENST00000444177 GNRH1P01148 92 aa17.06■□□□□ 0.32
TREX1-202ENST00000444177 NBPF11Q86T75 865 aa17.06■□□□□ 0.32
TREX1-202ENST00000444177 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
TREX1-202ENST00000444177 AATFQ9NY61 560 aaKnown RBP eCLIP17.06■□□□□ 0.32
TREX1-202ENST00000444177 MYO5AQ9Y4I1 1855 aaKnown RBP17.05■□□□□ 0.32
TREX1-202ENST00000444177 IGSF3O75054 1194 aa17.05■□□□□ 0.32
TREX1-202ENST00000444177 IDH1O75874 414 aaKnown RBP17.05■□□□□ 0.32
TREX1-202ENST00000444177 CYP2C8P10632 490 aa17.05■□□□□ 0.32
TREX1-202ENST00000444177 CTGFP29279 349 aa17.05■□□□□ 0.32
TREX1-202ENST00000444177 PSMC4P43686 418 aa17.05■□□□□ 0.32
TREX1-202ENST00000444177 SLC9C1Q4G0N8 1177 aa17.05■□□□□ 0.32
TREX1-202ENST00000444177 GADL1Q6ZQY3 521 aa17.05■□□□□ 0.32
TREX1-202ENST00000444177 ADGRA1Q86SQ6 560 aa17.05■□□□□ 0.32
TREX1-202ENST00000444177 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
TREX1-202ENST00000444177 ZNF333Q96JL9 665 aa17.05■□□□□ 0.32
TREX1-202ENST00000444177 PARK7Q99497 189 aaKnown RBP17.05■□□□□ 0.32
TREX1-202ENST00000444177 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.05■□□□□ 0.32
TREX1-202ENST00000444177 TRIM75PA6NK02 468 aa17.04■□□□□ 0.32
TREX1-202ENST00000444177 SMARCA5O60264 1052 aaPredicted RBP17.04■□□□□ 0.32
TREX1-202ENST00000444177 PLCG2P16885 1265 aa17.04■□□□□ 0.32
TREX1-202ENST00000444177 PRMT2P55345 433 aa17.04■□□□□ 0.32
TREX1-202ENST00000444177 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
TREX1-202ENST00000444177 DNAJC2Q99543 621 aaKnown RBP17.04■□□□□ 0.32
TREX1-202ENST00000444177 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
TREX1-202ENST00000444177 COL2A1P02458 1487 aaPredicted RBP17.04■□□□□ 0.32
TREX1-202ENST00000444177 BCRP11274 1271 aa17.03■□□□□ 0.32
TREX1-202ENST00000444177 EN2P19622 333 aaPredicted RBP17.03■□□□□ 0.32
TREX1-202ENST00000444177 RRP1BQ14684 758 aaKnown RBP17.03■□□□□ 0.32
TREX1-202ENST00000444177 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
TREX1-202ENST00000444177 TMEM106CQ9BVX2 250 aa17.03■□□□□ 0.32
TREX1-202ENST00000444177 DHX36Q9H2U1 1008 aaKnown RBP17.03■□□□□ 0.32
TREX1-202ENST00000444177 ANTXR1Q9H6X2 564 aa17.03■□□□□ 0.32
TREX1-202ENST00000444177 HERC5Q9UII4 1024 aaKnown RBP17.03■□□□□ 0.32
TREX1-202ENST00000444177 SLC45A1Q9Y2W3 748 aa17.03■□□□□ 0.32
TREX1-202ENST00000444177 PCDHB15Q9Y5E8 787 aa17.03■□□□□ 0.32
TREX1-202ENST00000444177 FMNL1O95466 1100 aaPredicted RBP17.02■□□□□ 0.32
TREX1-202ENST00000444177 CYP7A1P22680 504 aa17.02■□□□□ 0.32
TREX1-202ENST00000444177 HOXD10P28358 340 aa17.02■□□□□ 0.32
TREX1-202ENST00000444177 CAP2P40123 477 aa17.02■□□□□ 0.32
TREX1-202ENST00000444177 SPP2Q13103 211 aa17.02■□□□□ 0.32
TREX1-202ENST00000444177 MAPKAPK5Q8IW41 473 aa17.02■□□□□ 0.32
TREX1-202ENST00000444177 MAGEB6Q8N7X4 407 aa17.02■□□□□ 0.32
TREX1-202ENST00000444177 SH3TC2Q8TF17 1288 aa17.02■□□□□ 0.32
TREX1-202ENST00000444177 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.02■□□□□ 0.32
TREX1-202ENST00000444177 SRRDQ9UH36 339 aa17.02■□□□□ 0.32
TREX1-202ENST00000444177 OSBPP22059 807 aa17.01■□□□□ 0.31
TREX1-202ENST00000444177 DYNLL1P63167 89 aaKnown RBP17.01■□□□□ 0.31
TREX1-202ENST00000444177 MAP3K12Q12852 859 aa17.01■□□□□ 0.31
TREX1-202ENST00000444177 TTF1Q15361 905 aaPredicted RBP17.01■□□□□ 0.31
TREX1-202ENST00000444177 PRPF38BQ5VTL8 546 aaKnown RBP17.01■□□□□ 0.31
TREX1-202ENST00000444177 FOXP4Q8IVH2 680 aaPredicted RBP17.01■□□□□ 0.31
TREX1-202ENST00000444177 DCTPP1Q9H773 170 aa17.01■□□□□ 0.31
TREX1-202ENST00000444177 GOLIM4O00461 696 aa17■□□□□ 0.31
TREX1-202ENST00000444177 MYCP01106 439 aaPredicted RBP17■□□□□ 0.31
TREX1-202ENST00000444177 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
TREX1-202ENST00000444177 ZNF280CQ8ND82 737 aa17■□□□□ 0.31
TREX1-202ENST00000444177 PALD1Q9ULE6 856 aa17■□□□□ 0.31
TREX1-202ENST00000444177 AGTPBP1Q9UPW5 1226 aa17■□□□□ 0.31
TREX1-202ENST00000444177 ZSWIM8A7E2V4 1837 aa17■□□□□ 0.31
TREX1-202ENST00000444177 FLT1P17948 1338 aa16.99■□□□□ 0.31
TREX1-202ENST00000444177 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
TREX1-202ENST00000444177 FCGRTP55899 365 aa16.99■□□□□ 0.31
TREX1-202ENST00000444177 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
TREX1-202ENST00000444177 METTL16Q86W50 562 aaKnown RBP16.99■□□□□ 0.31
TREX1-202ENST00000444177 MIGA1Q8NAN2 632 aa16.99■□□□□ 0.31
TREX1-202ENST00000444177 RAET1EQ8TD07 263 aa16.99■□□□□ 0.31
TREX1-202ENST00000444177 TBC1D2Q9BYX2 928 aa16.99■□□□□ 0.31
TREX1-202ENST00000444177 BOLA2Q9H3K6 86 aa16.99■□□□□ 0.31
TREX1-202ENST00000444177 DOCK1Q14185 1865 aa16.99■□□□□ 0.31
TREX1-202ENST00000444177 MKI67P46013 3256 aaKnown RBP16.99■□□□□ 0.31
TREX1-202ENST00000444177 FOCADQ5VW36 1801 aa16.98■□□□□ 0.31
TREX1-202ENST00000444177 ATP5JP18859 108 aa16.98■□□□□ 0.31
TREX1-202ENST00000444177 JAG1P78504 1218 aa16.98■□□□□ 0.31
TREX1-202ENST00000444177 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
TREX1-202ENST00000444177 SMCR8Q8TEV9 937 aaPredicted RBP16.98■□□□□ 0.31
TREX1-202ENST00000444177 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
TREX1-202ENST00000444177 PAG1Q9NWQ8 432 aa16.98■□□□□ 0.31
TREX1-202ENST00000444177 SAP30BPQ9UHR5 308 aaKnown RBP16.98■□□□□ 0.31
TREX1-202ENST00000444177 CDK5RAP2Q96SN8 1893 aa16.98■□□□□ 0.31
TREX1-202ENST00000444177 PHIPQ8WWQ0 1821 aa16.98■□□□□ 0.31
TREX1-202ENST00000444177 MYPNQ86TC9 1320 aa16.97■□□□□ 0.31
TREX1-202ENST00000444177 BRCA2P51587 3418 aa16.97■□□□□ 0.31
TREX1-202ENST00000444177 GRK4P32298 578 aa16.97■□□□□ 0.31
TREX1-202ENST00000444177 HMGCS2P54868 508 aa16.97■□□□□ 0.31
TREX1-202ENST00000444177 CRACR2BQ8N4Y2 399 aaPredicted RBP16.97■□□□□ 0.31
TREX1-202ENST00000444177 WDR18Q9BV38 432 aa16.97■□□□□ 0.31
TREX1-202ENST00000444177 TRIM34Q9BYJ4 488 aa16.97■□□□□ 0.31
TREX1-202ENST00000444177 DNAJC18Q9H819 358 aa16.97■□□□□ 0.31
TREX1-202ENST00000444177 AS3MTQ9HBK9 375 aa16.97■□□□□ 0.31
TREX1-202ENST00000444177 PTPRFP10586 1907 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 HLA-DOAP06340 250 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 ASNSP08243 561 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 PDE6AP16499 860 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 PRKCZQ05513 592 aa16.96■□□□□ 0.31
TREX1-202ENST00000444177 SH3D19Q5HYK7 790 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms