RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 DDTLA6NHG4 134 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 FOXN1O15353 648 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 TBC1D12O60347 775 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 NEFLP07196 543 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 NOL9Q5SY16 702 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 TSHZ3Q63HK5 1081 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 OTUD7BQ6GQQ9 843 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ZFPM1Q8IX07 1006 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PI4K2BQ8TCG2 481 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 FSD1Q9BTV5 496 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 SNCAIPQ9Y6H5 919 aa12.47□□□□□ -0.41
HLA-DQB1-206ENST00000443574 SALL3Q9BXA9 1300 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 TCRBV5S4A2TA0A5A2 114 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 MBD4O95243 580 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 CENPBP07199 599 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 GTF2A2P52657 109 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PPATQ06203 517 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 PPIL2Q13356 520 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 SH3BP5LQ7L8J4 393 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 TTC6Q86TZ1 520 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 SCYL3Q8IZE3 742 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ZKSCAN4Q969J2 545 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 ZNF112Q9UJU3 913 aa12.46□□□□□ -0.41
HLA-DQB1-206ENST00000443574 LOC285556D6RIA3 1793 aa12.46□□□□□ -0.42
HLA-DQB1-206ENST00000443574 CASP8AP2Q9UKL3 1982 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 CTNND1O60716 968 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 INPP5BP32019 993 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 PDE1AP54750 535 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 MAP3K10Q02779 954 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 NUCB1Q02818 461 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 OTUD7AQ8TE49 926 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 APPBP2Q92624 585 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 ZIC5Q96T25 663 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 TBC1D2Q9BYX2 928 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 PRDM10Q9NQV6 1147 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 STAP2Q9UGK3 403 aa12.45□□□□□ -0.42
HLA-DQB1-206ENST00000443574 RNF113AO15541 343 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 IGHDP01880 384 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 POLR3DP05423 398 aaPredicted RBP12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 HSPA8P11142 646 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 CETPP11597 493 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 TM4SF4P48230 202 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 SNAPC2Q13487 334 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 TICAM2Q86XR7 235 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 FOXP4Q8IVH2 680 aaPredicted RBP12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 LCORLQ8N3X6 602 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 EHD4Q9H223 541 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 ARMT1Q9H993 441 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 SERPINB13Q9UIV8 391 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 TAOK2Q9UL54 1235 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 PALD1Q9ULE6 856 aa12.44□□□□□ -0.42
HLA-DQB1-206ENST00000443574 CCL15-CCL14A0A0B4J2E2 113 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 TRPA1O75762 1119 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 ASNSP08243 561 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 GNAT2P19087 354 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 LBX1P52954 281 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 CCL15Q16663 113 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 SDR42E1Q8WUS8 393 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 AS3MTQ9HBK9 375 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 GINM1Q9NU53 330 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 RNF186Q9NXI6 227 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 MCM9Q9NXL9 1143 aa12.43□□□□□ -0.42
HLA-DQB1-206ENST00000443574 FAM196BA6NMK8 535 aa12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 PHF20L1A8MW92 1017 aa12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 TRIM6-TRIM34B2RNG4 842 aa12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 GJA5P36382 358 aa12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 SLC4A8Q2Y0W8 1093 aa12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 ZCCHC17Q9NP64 241 aaKnown RBP12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 DCP1AQ9NPI6 582 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 ARPP21Q9UBL0 812 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 SLC4A4Q9Y6R1 1079 aa12.42□□□□□ -0.42
HLA-DQB1-206ENST00000443574 TESPA1A2RU30 521 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 IRF6O14896 467 aa12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 CFHR5Q9BXR6 569 aa12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 PUS7LQ9H0K6 701 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 OSBPL3Q9H4L5 887 aa12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 SWAP70Q9UH65 585 aa12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 TSKSQ9UJT2 592 aa12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 KCNH4Q9UQ05 1017 aa12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 ZHX2Q9Y6X8 837 aa12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 LAMA4Q16363 1823 aa12.41□□□□□ -0.42
HLA-DQB1-206ENST00000443574 CXCL11O14625 94 aa12.4□□□□□ -0.42
HLA-DQB1-206ENST00000443574 GPAA1O43292 621 aa12.4□□□□□ -0.42
HLA-DQB1-206ENST00000443574 PTPRAP18433 802 aa12.4□□□□□ -0.42
HLA-DQB1-206ENST00000443574 CAP2P40123 477 aa12.4□□□□□ -0.42
HLA-DQB1-206ENST00000443574 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
HLA-DQB1-206ENST00000443574 FASTKD5Q7L8L6 764 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-206ENST00000443574 NACAP1Q9BZK3 213 aa12.4□□□□□ -0.42
HLA-DQB1-206ENST00000443574 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
HLA-DQB1-206ENST00000443574 HIP1O00291 1037 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms