RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 NBPF3Q9H094 633 aa9.28□□□□□ -0.92
RPSA-202ENST00000443003 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
RPSA-202ENST00000443003 C11orf49Q9H6J7 331 aa9.28□□□□□ -0.92
RPSA-202ENST00000443003 GNL3LQ9NVN8 582 aaKnown RBP9.28□□□□□ -0.92
RPSA-202ENST00000443003 ABCF2Q9UG63 623 aa9.28□□□□□ -0.92
RPSA-202ENST00000443003 NOB1Q9ULX3 412 aaKnown RBP9.28□□□□□ -0.92
RPSA-202ENST00000443003 COL6A3P12111 3177 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 CUL9Q8IWT3 2517 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 CTNND1O60716 968 aaKnown RBP9.27□□□□□ -0.93
RPSA-202ENST00000443003 ENTPD3O75355 529 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 BTDP43251 543 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 PHKA1P46020 1223 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 TDHQ8IZJ6 230 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
RPSA-202ENST00000443003 HMX1Q9NP08 348 aaPredicted RBP9.27□□□□□ -0.93
RPSA-202ENST00000443003 DDX4Q9NQI0 724 aaKnown RBP9.27□□□□□ -0.93
RPSA-202ENST00000443003 DENND2AQ9ULE3 1009 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 CDK5RAP2Q96SN8 1893 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 MAST2Q6P0Q8 1798 aa9.27□□□□□ -0.93
RPSA-202ENST00000443003 SIPA1L1O43166 1804 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 BCAR3O75815 825 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 CYP2B6P20813 491 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 ADORA1P30542 326 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 BMP8BP34820 402 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 RFX5P48382 616 aaPredicted RBP9.26□□□□□ -0.93
RPSA-202ENST00000443003 HMGCS2P54868 508 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 C1QBPQ07021 282 aaKnown RBP9.26□□□□□ -0.93
RPSA-202ENST00000443003 ATF7IPQ6VMQ6 1270 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 ATG9AQ7Z3C6 839 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 FTSJ3Q8IY81 847 aaKnown RBP9.26□□□□□ -0.93
RPSA-202ENST00000443003 IDI2Q9BXS1 227 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.26□□□□□ -0.93
RPSA-202ENST00000443003 HDAC5Q9UQL6 1122 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 STXBP5LQ9Y2K9 1186 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 GAKO14976 1311 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 RPTORQ8N122 1335 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 SALL1Q9NSC2 1324 aa9.26□□□□□ -0.93
RPSA-202ENST00000443003 PEX10O60683 326 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 PRKAR2AP13861 404 aaKnown RBP9.25□□□□□ -0.93
RPSA-202ENST00000443003 CAPN2P17655 700 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 MDM2Q00987 491 aaPredicted RBP9.25□□□□□ -0.93
RPSA-202ENST00000443003 SPP2Q13103 211 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 RASGRF1Q13972 1273 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 ZGPATQ8N5A5 531 aaKnown RBP9.25□□□□□ -0.93
RPSA-202ENST00000443003 PROCA1Q8NCQ7 364 aaPredicted RBP9.25□□□□□ -0.93
RPSA-202ENST00000443003 TRIB2Q92519 343 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 FAM161BQ96MY7 647 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 USP44Q9H0E7 712 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 MTMR10Q9NXD2 777 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 CEP126Q9P2H0 1117 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 MROH7-TTC4A0A0A0MT08 1334 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 PFASO15067 1338 aa9.25□□□□□ -0.93
RPSA-202ENST00000443003 FOCADQ5VW36 1801 aa9.24□□□□□ -0.93
RPSA-202ENST00000443003 SEMA3EO15041 775 aa9.24□□□□□ -0.93
RPSA-202ENST00000443003 GCLCP48506 637 aaPredicted RBP9.24□□□□□ -0.93
RPSA-202ENST00000443003 PABPC4Q13310 644 aaKnown RBP eCLIP9.24□□□□□ -0.93not detected■■■■■ 40.5
RPSA-202ENST00000443003 LRIT3Q3SXY7 679 aa9.24□□□□□ -0.93
RPSA-202ENST00000443003 CCDC102BQ68D86 513 aa9.24□□□□□ -0.93
RPSA-202ENST00000443003 GPR153Q6NV75 609 aa9.24□□□□□ -0.93
RPSA-202ENST00000443003 SLF2Q8IX21 1173 aa9.24□□□□□ -0.93
RPSA-202ENST00000443003 ZNF280CQ8ND82 737 aa9.24□□□□□ -0.93
RPSA-202ENST00000443003 COL25A1Q9BXS0 654 aaPredicted RBP9.24□□□□□ -0.93
RPSA-202ENST00000443003 ASCC2Q9H1I8 757 aaPredicted RBP9.24□□□□□ -0.93
RPSA-202ENST00000443003 PA2G4Q9UQ80 394 aaKnown RBP9.24□□□□□ -0.93
RPSA-202ENST00000443003 LTBP2Q14767 1821 aa9.24□□□□□ -0.93
RPSA-202ENST00000443003 CIAO1O76071 339 aa9.23□□□□□ -0.93
RPSA-202ENST00000443003 UBTFL1P0CB47 393 aaPredicted RBP9.23□□□□□ -0.93
RPSA-202ENST00000443003 TRIM27P14373 513 aa9.23□□□□□ -0.93
RPSA-202ENST00000443003 IRX3P78415 501 aaPredicted RBP9.23□□□□□ -0.93
RPSA-202ENST00000443003 MTMR2Q13614 643 aa9.23□□□□□ -0.93
RPSA-202ENST00000443003 ERICH6Q7L0X2 663 aa9.23□□□□□ -0.93
RPSA-202ENST00000443003 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.23□□□□□ -0.93not detected■□□□□ 9.7
RPSA-202ENST00000443003 OSBPL5Q9H0X9 879 aaPredicted RBP9.23□□□□□ -0.93
RPSA-202ENST00000443003 CHMP4BQ9H444 224 aaKnown RBP9.23□□□□□ -0.93
RPSA-202ENST00000443003 GJD2Q9UKL4 321 aa9.23□□□□□ -0.93
RPSA-202ENST00000443003 OGDHLQ9ULD0 1010 aa9.23□□□□□ -0.93
RPSA-202ENST00000443003 MYO5AQ9Y4I1 1855 aaKnown RBP9.23□□□□□ -0.93
RPSA-202ENST00000443003 ZKSCAN1P17029 563 aaPredicted RBP9.22□□□□□ -0.93
RPSA-202ENST00000443003 CCND3P30281 292 aaPredicted RBP9.22□□□□□ -0.93
RPSA-202ENST00000443003 IL15P40933 162 aaPredicted RBP9.22□□□□□ -0.93
RPSA-202ENST00000443003 MAP3K10Q02779 954 aa9.22□□□□□ -0.93
RPSA-202ENST00000443003 MECOMQ03112 1051 aa9.22□□□□□ -0.93
RPSA-202ENST00000443003 PDE3AQ14432 1141 aa9.22□□□□□ -0.93
RPSA-202ENST00000443003 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
RPSA-202ENST00000443003 CCAR1Q8IX12 1150 aaKnown RBP9.22□□□□□ -0.93
RPSA-202ENST00000443003 NUDT12Q9BQG2 462 aa9.22□□□□□ -0.93
RPSA-202ENST00000443003 PAGR1Q9BTK6 254 aa9.22□□□□□ -0.93
RPSA-202ENST00000443003 AS3MTQ9HBK9 375 aa9.22□□□□□ -0.93
RPSA-202ENST00000443003 CWC22Q9HCG8 908 aaKnown RBP9.22□□□□□ -0.93
RPSA-202ENST00000443003 MYH1P12882 1939 aa9.21□□□□□ -0.93
RPSA-202ENST00000443003 USP17L5A8MUK1 530 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 GNAI3P08754 354 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 RHBDL3P58872 404 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 TIMM10P62072 90 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 RRP1BQ14684 758 aaKnown RBP9.21□□□□□ -0.94
RPSA-202ENST00000443003 CCL14Q16627 93 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 LRRC26Q2I0M4 334 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 PI16Q6UXB8 463 aa9.21□□□□□ -0.94
RPSA-202ENST00000443003 TEX11Q8IYF3 940 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms