RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 HAUS7Q99871 368 aa26.87■■□□□ 1.89
HDLBP-220ENST00000442730 RIOK1Q9BRS2 568 aaKnown RBP26.87■■□□□ 1.89
HDLBP-220ENST00000442730 BOLA2Q9H3K6 86 aa26.87■■□□□ 1.89
HDLBP-220ENST00000442730 PAG1Q9NWQ8 432 aa26.87■■□□□ 1.89
HDLBP-220ENST00000442730 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.87■■□□□ 1.89
HDLBP-220ENST00000442730 ZHX2Q9Y6X8 837 aa26.87■■□□□ 1.89
HDLBP-220ENST00000442730 ZFYVE28Q9HCC9 887 aa26.86■■□□□ 1.89
HDLBP-220ENST00000442730 PALD1Q9ULE6 856 aa26.86■■□□□ 1.89
HDLBP-220ENST00000442730 DDX60LQ5H9U9 1706 aaKnown RBP26.85■■□□□ 1.89
HDLBP-220ENST00000442730 TCRBV5S4A2TA0A5A2 114 aa26.85■■□□□ 1.89
HDLBP-220ENST00000442730 CXCL11O14625 94 aa26.85■■□□□ 1.89
HDLBP-220ENST00000442730 DNAJC18Q9H819 358 aa26.85■■□□□ 1.89
HDLBP-220ENST00000442730 SAP30BPQ9UHR5 308 aaKnown RBP26.85■■□□□ 1.89
HDLBP-220ENST00000442730 AFG3L2Q9Y4W6 797 aa26.85■■□□□ 1.89
HDLBP-220ENST00000442730 PHIPQ8WWQ0 1821 aa26.85■■□□□ 1.89
HDLBP-220ENST00000442730 ZNF532Q9HCE3 1301 aa26.85■■□□□ 1.89
HDLBP-220ENST00000442730 RRP1BQ14684 758 aaKnown RBP26.84■■□□□ 1.89
HDLBP-220ENST00000442730 PKN2Q16513 984 aaKnown RBP26.84■■□□□ 1.89
HDLBP-220ENST00000442730 ANKRD23Q86SG2 305 aa26.84■■□□□ 1.89
HDLBP-220ENST00000442730 METTL16Q86W50 562 aaKnown RBP26.84■■□□□ 1.89
HDLBP-220ENST00000442730 MAGEB6P1A0A0J9YX57 407 aa26.83■■□□□ 1.89
HDLBP-220ENST00000442730 CCDC85CA6NKD9 419 aa26.83■■□□□ 1.89
HDLBP-220ENST00000442730 CCDC84Q86UT8 332 aaPredicted RBP26.83■■□□□ 1.89
HDLBP-220ENST00000442730 ECHDC1Q9NTX5 307 aa26.83■■□□□ 1.89
HDLBP-220ENST00000442730 ATAD5Q96QE3 1844 aa26.82■■□□□ 1.88
HDLBP-220ENST00000442730 A0A0G2JLL6 359 aaPredicted RBP26.82■■□□□ 1.88
HDLBP-220ENST00000442730 USP5P45974 858 aa26.82■■□□□ 1.88
HDLBP-220ENST00000442730 PRRT2Q7Z6L0 340 aaPredicted RBP26.82■■□□□ 1.88
HDLBP-220ENST00000442730 ERO1AQ96HE7 468 aa26.82■■□□□ 1.88
HDLBP-220ENST00000442730 PDHXO00330 501 aa26.81■■□□□ 1.88
HDLBP-220ENST00000442730 CAP2P40123 477 aa26.81■■□□□ 1.88
HDLBP-220ENST00000442730 SP3Q02447 781 aa26.81■■□□□ 1.88
HDLBP-220ENST00000442730 SLC4A8Q2Y0W8 1093 aa26.81■■□□□ 1.88
HDLBP-220ENST00000442730 CD99L2Q8TCZ2 262 aa26.81■■□□□ 1.88
HDLBP-220ENST00000442730 HTTP42858 3142 aa26.81■■□□□ 1.88
HDLBP-220ENST00000442730 PTPRFP10586 1907 aa26.8■■□□□ 1.88
HDLBP-220ENST00000442730 TRIM75PA6NK02 468 aa26.8■■□□□ 1.88
HDLBP-220ENST00000442730 TLR2O60603 784 aa26.8■■□□□ 1.88
HDLBP-220ENST00000442730 HLA-DOAP06340 250 aa26.8■■□□□ 1.88
HDLBP-220ENST00000442730 ADD2P35612 726 aa26.8■■□□□ 1.88
HDLBP-220ENST00000442730 GPAT2Q6NUI2 795 aa26.8■■□□□ 1.88
HDLBP-220ENST00000442730 FOXP4Q8IVH2 680 aaPredicted RBP26.8■■□□□ 1.88
HDLBP-220ENST00000442730 CRACR2BQ8N4Y2 399 aaPredicted RBP26.8■■□□□ 1.88
HDLBP-220ENST00000442730 NAV1Q8NEY1 1877 aa26.79■■□□□ 1.88
HDLBP-220ENST00000442730 CAP1Q01518 475 aa26.79■■□□□ 1.88
HDLBP-220ENST00000442730 OTOP1Q7RTM1 612 aa26.79■■□□□ 1.88
HDLBP-220ENST00000442730 GPATCH3Q96I76 525 aa26.79■■□□□ 1.88
HDLBP-220ENST00000442730 TRIM34Q9BYJ4 488 aa26.79■■□□□ 1.88
HDLBP-220ENST00000442730 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.79■■□□□ 1.886e-9■■■□□ 16.4
HDLBP-220ENST00000442730 HPS5Q9UPZ3 1129 aa26.79■■□□□ 1.88
HDLBP-220ENST00000442730 ADGRA2Q96PE1 1338 aa26.79■■□□□ 1.88
HDLBP-220ENST00000442730 MYH1P12882 1939 aa26.78■■□□□ 1.88
HDLBP-220ENST00000442730 SLFNL1Q499Z3 407 aa26.78■■□□□ 1.88
HDLBP-220ENST00000442730 TSHZ3Q63HK5 1081 aa26.78■■□□□ 1.88
HDLBP-220ENST00000442730 FBXO46Q6PJ61 603 aaPredicted RBP26.78■■□□□ 1.88
HDLBP-220ENST00000442730 FASTKD5Q7L8L6 764 aaKnown RBP26.78■■□□□ 1.88
HDLBP-220ENST00000442730 LCORLQ8N3X6 602 aa26.78■■□□□ 1.88
HDLBP-220ENST00000442730 CRNKL1Q9BZJ0 848 aaKnown RBP26.78■■□□□ 1.88
HDLBP-220ENST00000442730 TRIM17Q9Y577 477 aa26.78■■□□□ 1.88
HDLBP-220ENST00000442730 JAG1P78504 1218 aa26.77■■□□□ 1.88
HDLBP-220ENST00000442730 EHD4Q9H223 541 aa26.77■■□□□ 1.88
HDLBP-220ENST00000442730 CHGBP05060 677 aa26.76■■□□□ 1.87
HDLBP-220ENST00000442730 SHROOM1Q2M3G4 852 aaPredicted RBP26.76■■□□□ 1.87
HDLBP-220ENST00000442730 GADL1Q6ZQY3 521 aa26.76■■□□□ 1.87
HDLBP-220ENST00000442730 TBC1D2Q9BYX2 928 aa26.76■■□□□ 1.87
HDLBP-220ENST00000442730 LOC285556D6RIA3 1793 aa26.76■■□□□ 1.87
HDLBP-220ENST00000442730 MYH7P12883 1935 aa26.75■■□□□ 1.87
HDLBP-220ENST00000442730 HDAC1Q13547 482 aaPredicted RBP26.75■■□□□ 1.87
HDLBP-220ENST00000442730 UBE3CQ15386 1083 aa26.75■■□□□ 1.87
HDLBP-220ENST00000442730 ZNF280CQ8ND82 737 aa26.75■■□□□ 1.87
HDLBP-220ENST00000442730 PARK7Q99497 189 aaKnown RBP26.75■■□□□ 1.87
HDLBP-220ENST00000442730 ARMT1Q9H993 441 aa26.75■■□□□ 1.87
HDLBP-220ENST00000442730 USP17L5A8MUK1 530 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 MBD4O95243 580 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 GDF11O95390 407 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 ASNSP08243 561 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 SPP2Q13103 211 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 C17orf99Q6UX52 265 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 OTUD7AQ8TE49 926 aaPredicted RBP26.74■■□□□ 1.87
HDLBP-220ENST00000442730 SDR42E1Q8WUS8 393 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 EFCC1Q9HA90 598 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 SERPINB13Q9UIV8 391 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 SLC45A1Q9Y2W3 748 aa26.74■■□□□ 1.87
HDLBP-220ENST00000442730 CYP2C8P10632 490 aa26.73■■□□□ 1.87
HDLBP-220ENST00000442730 AAMPQ13685 434 aa26.73■■□□□ 1.87
HDLBP-220ENST00000442730 TTC6Q86TZ1 520 aa26.73■■□□□ 1.87
HDLBP-220ENST00000442730 CPA4Q9UI42 421 aa26.73■■□□□ 1.87
HDLBP-220ENST00000442730 ZBTB21Q9ULJ3 1066 aa26.73■■□□□ 1.87
HDLBP-220ENST00000442730 TTC41PQ6P2S7 1318 aa26.72■■□□□ 1.87
HDLBP-220ENST00000442730 PLCD1P51178 756 aa26.72■■□□□ 1.87
HDLBP-220ENST00000442730 LACTBP83111 547 aaPredicted RBP26.72■■□□□ 1.87
HDLBP-220ENST00000442730 ZSCAN25Q6NSZ9 544 aa26.72■■□□□ 1.87
HDLBP-220ENST00000442730 TATDN1Q6P1N9 297 aa26.72■■□□□ 1.87
HDLBP-220ENST00000442730 AS3MTQ9HBK9 375 aa26.72■■□□□ 1.87
HDLBP-220ENST00000442730 DCP1AQ9NPI6 582 aaPredicted RBP26.72■■□□□ 1.87
HDLBP-220ENST00000442730 GINM1Q9NU53 330 aa26.72■■□□□ 1.87
HDLBP-220ENST00000442730 AGTPBP1Q9UPW5 1226 aa26.72■■□□□ 1.87
HDLBP-220ENST00000442730 ZSWIM8A7E2V4 1837 aa26.72■■□□□ 1.87
HDLBP-220ENST00000442730 TREML2Q5T2D2 321 aa26.71■■□□□ 1.87
HDLBP-220ENST00000442730 KBTBD3Q8NAB2 608 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms