RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.76■□□□□ 0.59
MCF2L-217ENST00000441756 B4E1Z4 1266 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 CPA1P15085 419 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 EXOSC10Q01780 885 aaKnown RBP18.75■□□□□ 0.59
MCF2L-217ENST00000441756 NFIAQ12857 509 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 C16orf86Q6ZW13 317 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 FAM83AQ86UY5 434 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 ZSCAN29Q8IWY8 852 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-217ENST00000441756 FBXL16Q8N461 479 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 FAM151AQ8WW52 585 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 ZSCAN31Q96LW9 406 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-217ENST00000441756 TRIM34Q9BYJ4 488 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 MKNK2Q9HBH9 465 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 VEZTQ9HBM0 779 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 FAM198AQ9UFP1 575 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 LIMCH1Q9UPQ0 1083 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 ATRNL1Q5VV63 1379 aa18.75■□□□□ 0.59
MCF2L-217ENST00000441756 CLRN2A0PK11 232 aa18.74■□□□□ 0.59
MCF2L-217ENST00000441756 ERICH2A1L162 156 aa18.74■□□□□ 0.59
MCF2L-217ENST00000441756 KDM4AO75164 1064 aa18.74■□□□□ 0.59
MCF2L-217ENST00000441756 CACNB3P54284 484 aa18.74■□□□□ 0.59
MCF2L-217ENST00000441756 TBC1D10BQ4KMP7 808 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-217ENST00000441756 SH2B1Q9NRF2 756 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-217ENST00000441756 SERPINB13Q9UIV8 391 aa18.74■□□□□ 0.59
MCF2L-217ENST00000441756 DDNO94850 711 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-217ENST00000441756 CD2BP2O95400 341 aaKnown RBP18.73■□□□□ 0.59
MCF2L-217ENST00000441756 HSP90AA1P07900 732 aaKnown RBP18.73■□□□□ 0.59
MCF2L-217ENST00000441756 PLCD1P51178 756 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 TCP10Q12799 353 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 SLC4A8Q2Y0W8 1093 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 CCDC178Q5BJE1 867 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 RBM26Q5T8P6 1007 aaKnown RBP18.73■□□□□ 0.59
MCF2L-217ENST00000441756 Q6ZUG5 572 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 IQCA1Q86XH1 822 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 APOBEC3FQ8IUX4 373 aaKnown RBP18.73■□□□□ 0.59
MCF2L-217ENST00000441756 STK11IPQ8N1F8 1099 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 CRACR2BQ8N4Y2 399 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-217ENST00000441756 CHMP4CQ96CF2 233 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 L3MBTL3Q96JM7 780 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-217ENST00000441756 UBAC1Q9BSL1 405 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 ADARB2Q9NS39 739 aaKnown RBP18.73■□□□□ 0.59
MCF2L-217ENST00000441756 PI4KBQ9UBF8 816 aa18.73■□□□□ 0.59
MCF2L-217ENST00000441756 SHTN1A0MZ66 631 aa18.72■□□□□ 0.59
MCF2L-217ENST00000441756 TCP10L2B9ZVM9 353 aa18.72■□□□□ 0.59
MCF2L-217ENST00000441756 RANBP6O60518 1105 aaKnown RBP18.72■□□□□ 0.59
MCF2L-217ENST00000441756 NBPF9Q3BBW0 867 aa18.72■□□□□ 0.59
MCF2L-217ENST00000441756 ZNF444Q8N0Y2 327 aaPredicted RBP18.72■□□□□ 0.59
MCF2L-217ENST00000441756 AGXT2Q9BYV1 514 aa18.72■□□□□ 0.59
MCF2L-217ENST00000441756 TSPY2A6NKD2 308 aa18.71■□□□□ 0.59
MCF2L-217ENST00000441756 CDK8P49336 464 aa18.71■□□□□ 0.59
MCF2L-217ENST00000441756 ANTXR2P58335 489 aa18.71■□□□□ 0.59
MCF2L-217ENST00000441756 NOL8Q76FK4 1167 aaKnown RBP18.71■□□□□ 0.59
MCF2L-217ENST00000441756 SAMD7Q7Z3H4 446 aa18.71■□□□□ 0.59
MCF2L-217ENST00000441756 FOXP4Q8IVH2 680 aaPredicted RBP18.71■□□□□ 0.59
MCF2L-217ENST00000441756 TMTC2Q8N394 836 aa18.71■□□□□ 0.59
MCF2L-217ENST00000441756 TCEANC2Q96MN5 208 aa18.71■□□□□ 0.59
MCF2L-217ENST00000441756 ZSWIM5Q9P217 1185 aa18.71■□□□□ 0.59
MCF2L-217ENST00000441756 ANGEL1Q9UNK9 670 aaKnown RBP18.71■□□□□ 0.59
MCF2L-217ENST00000441756 IQCA1LA6NCM1 817 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 GLTPD2A6NH11 291 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 IFIT3O14879 490 aaKnown RBP18.7■□□□□ 0.58
MCF2L-217ENST00000441756 PRDM1O75626 825 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 GABPAQ06546 454 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 TOB2Q14106 344 aaPredicted RBP18.7■□□□□ 0.58
MCF2L-217ENST00000441756 TMEM67Q5HYA8 995 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 CYB5R4Q7L1T6 521 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 BRF1Q92994 677 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 DYNLL2Q96FJ2 89 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 TMX3Q96JJ7 454 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 CSRNP1Q96S65 589 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 HERC5Q9UII4 1024 aaKnown RBP18.7■□□□□ 0.58
MCF2L-217ENST00000441756 HACL1Q9UJ83 578 aa18.7■□□□□ 0.58
MCF2L-217ENST00000441756 CNTNAP1P78357 1384 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 SH2B2O14492 632 aaPredicted RBP18.69■□□□□ 0.58
MCF2L-217ENST00000441756 TSPY3P0CV98 308 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 TSPY8P0CW00 308 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 EPS15P42566 896 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 LIFRP42702 1097 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 PPP4R3BQ5MIZ7 849 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 CHST3Q7LGC8 479 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 HOOK2Q96ED9 719 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 CCDC17Q96LX7 622 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 PPP2R3BQ9Y5P8 575 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 TACC3Q9Y6A5 838 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 PITPNM2Q9BZ72 1349 aa18.69■□□□□ 0.58
MCF2L-217ENST00000441756 DDTLA6NHG4 134 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-217ENST00000441756 RASA1P20936 1047 aa18.68■□□□□ 0.58
MCF2L-217ENST00000441756 WTAPQ15007 396 aa18.68■□□□□ 0.58
MCF2L-217ENST00000441756 SYNE3Q6ZMZ3 975 aa18.68■□□□□ 0.58
MCF2L-217ENST00000441756 NFXL1Q6ZNB6 911 aa18.68■□□□□ 0.58
MCF2L-217ENST00000441756 ZFPM1Q8IX07 1006 aa18.68■□□□□ 0.58
MCF2L-217ENST00000441756 TRPM4Q8TD43 1214 aa18.68■□□□□ 0.58
MCF2L-217ENST00000441756 ZSCAN10Q96SZ4 725 aaPredicted RBP18.68■□□□□ 0.58
MCF2L-217ENST00000441756 LRRC2Q9BYS8 371 aa18.68■□□□□ 0.58
MCF2L-217ENST00000441756 INCENPQ9NQS7 918 aa18.68■□□□□ 0.58
MCF2L-217ENST00000441756 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
MCF2L-217ENST00000441756 MYH8P13535 1937 aa18.67■□□□□ 0.58
MCF2L-217ENST00000441756 CCDC69A6NI79 296 aa18.67■□□□□ 0.58
MCF2L-217ENST00000441756 SMIM22K7EJ46 135 aa18.67■□□□□ 0.58
MCF2L-217ENST00000441756 EGFRP00533 1210 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms