RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TAOK2Q9UL54 1235 aa7.01□□□□□ -1.29
VPS50-205ENST00000441602 CNPY2Q9Y2B0 182 aa7.01□□□□□ -1.29
VPS50-205ENST00000441602 LRRC37AA6NMS7 1700 aa7.01□□□□□ -1.29
VPS50-205ENST00000441602 CCDC88AQ3V6T2 1871 aa7.01□□□□□ -1.29
VPS50-205ENST00000441602 TNKSO95271 1327 aa7.01□□□□□ -1.29
VPS50-205ENST00000441602 TEKT1Q969V4 418 aa7.01□□□□□ -1.29
VPS50-205ENST00000441602 BRMS1Q9HCU9 246 aa7.01□□□□□ -1.29
VPS50-205ENST00000441602 GAKO14976 1311 aa7□□□□□ -1.29
VPS50-205ENST00000441602 HLA-DOAP06340 250 aa7□□□□□ -1.29
VPS50-205ENST00000441602 IFNAR1P17181 557 aa7□□□□□ -1.29
VPS50-205ENST00000441602 HDLBPQ00341 1268 aaKnown RBP7□□□□□ -1.29
VPS50-205ENST00000441602 DNM1Q05193 864 aaKnown RBP7□□□□□ -1.29
VPS50-205ENST00000441602 RESTQ13127 1097 aa7□□□□□ -1.29
VPS50-205ENST00000441602 SF3A1Q15459 793 aaKnown RBP7□□□□□ -1.29
VPS50-205ENST00000441602 STK11IPQ8N1F8 1099 aa7□□□□□ -1.29
VPS50-205ENST00000441602 SH3RF3Q8TEJ3 882 aaPredicted RBP7□□□□□ -1.29
VPS50-205ENST00000441602 KAT14Q9H8E8 782 aa7□□□□□ -1.29
VPS50-205ENST00000441602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7□□□□□ -1.29
VPS50-205ENST00000441602 NID2Q14112 1375 aa7□□□□□ -1.29
VPS50-205ENST00000441602 CACNA1SQ13698 1873 aa7□□□□□ -1.29
VPS50-205ENST00000441602 FGRP09769 529 aa7□□□□□ -1.29
VPS50-205ENST00000441602 FOSBP53539 338 aa7□□□□□ -1.29
VPS50-205ENST00000441602 DIXDC1Q155Q3 683 aa7□□□□□ -1.29
VPS50-205ENST00000441602 CCDC183Q5T5S1 534 aa7□□□□□ -1.29
VPS50-205ENST00000441602 C12orf60Q5U649 245 aa7□□□□□ -1.29
VPS50-205ENST00000441602 HHIPL2Q6UWX4 724 aa7□□□□□ -1.29
VPS50-205ENST00000441602 TTLL6Q8N841 843 aa7□□□□□ -1.29
VPS50-205ENST00000441602 JMYQ8N9B5 988 aa7□□□□□ -1.29
VPS50-205ENST00000441602 TGFBRAP1Q8WUH2 860 aa7□□□□□ -1.29
VPS50-205ENST00000441602 SLC26A6Q9BXS9 759 aa7□□□□□ -1.29
VPS50-205ENST00000441602 RTFDC1Q9BY42 306 aaPredicted RBP7□□□□□ -1.29
VPS50-205ENST00000441602 GPHNQ9NQX3 736 aaPredicted RBP7□□□□□ -1.29
VPS50-205ENST00000441602 TTF2Q9UNY4 1162 aaKnown RBP7□□□□□ -1.29
VPS50-205ENST00000441602 QSER1Q2KHR3 1735 aa7□□□□□ -1.29
VPS50-205ENST00000441602 DEXIO95424 95 aa7□□□□□ -1.29
VPS50-205ENST00000441602 STRIP1Q5VSL9 837 aa7□□□□□ -1.29
VPS50-205ENST00000441602 BICD2Q8TD16 824 aa7□□□□□ -1.29
VPS50-205ENST00000441602 TRIM34Q9BYJ4 488 aa7□□□□□ -1.29
VPS50-205ENST00000441602 TMOD2Q9NZR1 351 aa7□□□□□ -1.29
VPS50-205ENST00000441602 HPS5Q9UPZ3 1129 aa7□□□□□ -1.29
VPS50-205ENST00000441602 MYO3BQ8WXR4 1341 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 FMNL1O95466 1100 aaPredicted RBP6.99□□□□□ -1.29
VPS50-205ENST00000441602 CTDNEP1O95476 244 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 TSPY3P0CV98 308 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 TSPY8P0CW00 308 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 ZNF445P59923 1031 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 DOK7Q18PE1 504 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 CCDC73Q6ZRK6 1079 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 DGKHQ86XP1 1220 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 MAPKAPK5Q8IW41 473 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 FANCBQ8NB91 859 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 FBXO18Q8NFZ0 1043 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 MRIQ9BWK5 157 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 VPS33BQ9H267 617 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 ROBO3Q96MS0 1386 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 USP17L3A6NCW0 530 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 USP17L4A6NCW7 530 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 STK38Q15208 465 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 USP17L1Q7RTZ2 530 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 RAB11FIP4Q86YS3 637 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 LZTS2Q9BRK4 669 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 ZKSCAN3Q9BRR0 538 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 RNF26Q9BY78 433 aaPredicted RBP6.99□□□□□ -1.29
VPS50-205ENST00000441602 DDX19AQ9NUU7 478 aaKnown RBP6.99□□□□□ -1.29
VPS50-205ENST00000441602 ZNF219Q9P2Y4 722 aaPredicted RBP6.99□□□□□ -1.29
VPS50-205ENST00000441602 SWAP70Q9UH65 585 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 HDAC9Q9UKV0 1011 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 MYO5AQ9Y4I1 1855 aaKnown RBP6.99□□□□□ -1.29
VPS50-205ENST00000441602 PPIP5K2O43314 1243 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 USP17L8P0C7I0 530 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 COL9A3Q14050 684 aaPredicted RBP6.99□□□□□ -1.29
VPS50-205ENST00000441602 ANKRD31Q8N7Z5 1873 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 ZNF384Q8TF68 577 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 DAGLAQ9Y4D2 1042 aa6.99□□□□□ -1.29
VPS50-205ENST00000441602 KIAA1551Q9HCM1 1747 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 C10orf71Q711Q0 1435 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 ECE2O60344 883 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 PRDM1O75626 825 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 CHRNA5P30532 468 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 ADD1P35611 737 aaKnown RBP6.98□□□□□ -1.29
VPS50-205ENST00000441602 TFAP4Q01664 338 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 KIAA2012Q0VF49 1180 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 SEC23AQ15436 765 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 KCNG4Q8TDN1 519 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 MAP3K14Q99558 947 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 GDPD2Q9HCC8 539 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 TCP11L1Q9NUJ3 509 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 USP40Q9NVE5 1235 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 CYP2D7A0A087X1C5 515 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 F8W031 263 aaPredicted RBP6.98□□□□□ -1.29
VPS50-205ENST00000441602 YEATS4O95619 227 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 RBM5P52756 815 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS50-205ENST00000441602 GUCY1B3Q02153 619 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 ZSCAN23Q3MJ62 389 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 KRT40Q6A162 431 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 DEFB132Q7Z7B7 95 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 CCDC144CPQ8IYA2 1237 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 LEO1Q8WVC0 666 aaPredicted RBP6.98□□□□□ -1.29
VPS50-205ENST00000441602 TSPY26PQ9H489 355 aa6.98□□□□□ -1.29
VPS50-205ENST00000441602 SAP30BPQ9UHR5 308 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms