RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 GPR101Q96P66 508 aaPredicted RBP15.33■□□□□ 0.04
CPSF4-206ENST00000441580 ALG1Q9BT22 464 aa15.33■□□□□ 0.04
CPSF4-206ENST00000441580 RTFDC1Q9BY42 306 aaPredicted RBP15.33■□□□□ 0.04
CPSF4-206ENST00000441580 RBM28Q9NW13 759 aaKnown RBP15.33■□□□□ 0.04
CPSF4-206ENST00000441580 POLLQ9UGP5 575 aa15.33■□□□□ 0.04
CPSF4-206ENST00000441580 CDC27P30260 824 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 NTRK3Q16288 839 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 MFSD14BQ5SR56 506 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 IFIT1BQ5T764 474 aaKnown RBP15.32■□□□□ 0.04
CPSF4-206ENST00000441580 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-206ENST00000441580 CATIPQ7Z7H3 387 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 SLC51AQ86UW1 340 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 MPNDQ8N594 471 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 NKX2-3Q8TAU0 364 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 BICD2Q8TD16 824 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 ZNF287Q9HBT7 754 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 SENP2Q9HC62 589 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 JAG2Q9Y219 1238 aa15.32■□□□□ 0.04
CPSF4-206ENST00000441580 RANBP6O60518 1105 aaKnown RBP15.31■□□□□ 0.04
CPSF4-206ENST00000441580 DEXIO95424 95 aa15.31■□□□□ 0.04
CPSF4-206ENST00000441580 YEATS4O95619 227 aa15.31■□□□□ 0.04
CPSF4-206ENST00000441580 BTDP43251 543 aa15.31■□□□□ 0.04
CPSF4-206ENST00000441580 KIF23Q02241 960 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-206ENST00000441580 SLC15A2Q16348 729 aa15.31■□□□□ 0.04
CPSF4-206ENST00000441580 FAM173BQ6P4H8 233 aa15.31■□□□□ 0.04
CPSF4-206ENST00000441580 ENAHQ8N8S7 591 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-206ENST00000441580 FAM163AQ96GL9 167 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-206ENST00000441580 MCM9Q9NXL9 1143 aa15.31■□□□□ 0.04
CPSF4-206ENST00000441580 C10orf71Q711Q0 1435 aa15.31■□□□□ 0.04
CPSF4-206ENST00000441580 MYH6P13533 1939 aa15.31■□□□□ 0.04
CPSF4-206ENST00000441580 CYP2D7A0A087X1C5 515 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 GPR75-ASB3A0A0A6YYF3 556 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 RXRAP19793 462 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 ADD1P35611 737 aaKnown RBP15.3■□□□□ 0.04
CPSF4-206ENST00000441580 CCDC173Q0VFZ6 552 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 DIXDC1Q155Q3 683 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 C12orf60Q5U649 245 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 KCNG4Q8TDN1 519 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 SH3RF3Q8TEJ3 882 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-206ENST00000441580 ZKSCAN3Q9BRR0 538 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 MYL10Q9BUA6 226 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 SLC26A6Q9BXS9 759 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 RNF26Q9BY78 433 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-206ENST00000441580 NUP62CLQ9H1M0 184 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 ANO8Q9HCE9 1232 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-206ENST00000441580 INCENPQ9NQS7 918 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 FAM217BQ9NTX9 383 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-206ENST00000441580 POLR3EQ9NVU0 708 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 RTEL1Q9NZ71 1219 aa15.3■□□□□ 0.04
CPSF4-206ENST00000441580 MKRN1Q9UHC7 482 aaKnown RBP15.3■□□□□ 0.04
CPSF4-206ENST00000441580 GUCY1B3Q02153 619 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 GNL2Q13823 731 aaKnown RBP15.29■□□□□ 0.04
CPSF4-206ENST00000441580 SAFBQ15424 915 aaKnown RBP eCLIP15.29■□□□□ 0.04
CPSF4-206ENST00000441580 MYSM1Q5VVJ2 828 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 MSL1Q68DK7 614 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 KRT40Q6A162 431 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-206ENST00000441580 C2CD5Q86YS7 1000 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 FANCBQ8NB91 859 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 CAMKK2Q96RR4 588 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 ZC3H12CQ9C0D7 883 aaKnown RBP15.29■□□□□ 0.04
CPSF4-206ENST00000441580 RCOR1Q9UKL0 485 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 MYH1P12882 1939 aa15.29■□□□□ 0.04
CPSF4-206ENST00000441580 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-206ENST00000441580 TSPY2A6NKD2 308 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 H0YIN7 160 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 XBP1P17861 261 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 AKAP17AQ02040 695 aaKnown RBP15.28■□□□□ 0.04
CPSF4-206ENST00000441580 POTEAQ6S8J7 498 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 CCDC73Q6ZRK6 1079 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 CCDC144CPQ8IYA2 1237 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 TEX11Q8IYF3 940 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 NUP133Q8WUM0 1156 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 PHKBQ93100 1093 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 CNKSR1Q969H4 720 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 PANK2Q9BZ23 570 aa15.28■□□□□ 0.04
CPSF4-206ENST00000441580 TFIP11Q9UBB9 837 aaKnown RBP15.28■□□□□ 0.04
CPSF4-206ENST00000441580 RGS17Q9UGC6 210 aaPredicted RBP15.28■□□□□ 0.04
CPSF4-206ENST00000441580 SNED1Q8TER0 1413 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 FLT1P17948 1338 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 PRDM1O75626 825 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 CYP2D6P10635 497 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 BAG6P46379 1132 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 FKBP1AP62942 108 aaKnown RBP15.27■□□□□ 0.04
CPSF4-206ENST00000441580 SF3B2Q13435 895 aaKnown RBP15.27■□□□□ 0.04
CPSF4-206ENST00000441580 STK38Q15208 465 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 MAP3K11Q16584 847 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 CC2D2BQ6DHV5 1058 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 STK11IPQ8N1F8 1099 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 CTCFLQ8NI51 663 aaPredicted RBP15.27■□□□□ 0.04
CPSF4-206ENST00000441580 CLSTN2Q9H4D0 955 aa15.27■□□□□ 0.04
CPSF4-206ENST00000441580 PLIN4Q96Q06 1357 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 A0A1W2PQ27 194 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 A0A1W2PQ64 194 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 A0A1W2PQD8 194 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 G3V3G9 751 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 PPFIA3O75145 1194 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 POLR3DP05423 398 aaPredicted RBP15.26■□□□□ 0.03
CPSF4-206ENST00000441580 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms