RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 FKBP4Q02790 459 aaKnown RBP eCLIP8.52□□□□□ -1.05
HDAC9-214ENST00000441542 PPARAQ07869 468 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 SLC9C2Q5TAH2 1124 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 ANKRD18AQ8IVF6 992 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 CEP89Q96ST8 783 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 ALG1Q9BT22 464 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 C19orf44Q9H6X5 657 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 MED4Q9NPJ6 270 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 HPCAL4Q9UM19 191 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.52□□□□□ -1.05
HDAC9-214ENST00000441542 PPP1R12BO60237 982 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-214ENST00000441542 ALDH1L1O75891 902 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 CMA1P23946 247 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 CLNS1AP54105 237 aaKnown RBP8.52□□□□□ -1.05
HDAC9-214ENST00000441542 SEMA3FQ13275 785 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 EZH2Q15910 746 aaKnown RBP8.52□□□□□ -1.05
HDAC9-214ENST00000441542 FCHSD1Q86WN1 690 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 NGDNQ8NEJ9 315 aaKnown RBP8.52□□□□□ -1.05
HDAC9-214ENST00000441542 CTCFLQ8NI51 663 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-214ENST00000441542 JADE2Q9NQC1 790 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 MAN1B1Q9UKM7 699 aa8.52□□□□□ -1.05
HDAC9-214ENST00000441542 MYO3AQ8NEV4 1616 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 ACEP12821 1306 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 NEDD4P46934 1319 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 CDHR2Q9BYE9 1310 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 MACROD2A1Z1Q3 448 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 FXR1P51114 621 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC9-214ENST00000441542 TRDNQ13061 729 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 NOC3LQ8WTT2 800 aaKnown RBP8.51□□□□□ -1.05
HDAC9-214ENST00000441542 AIDAQ96BJ3 306 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 CCDC85AQ96PX6 553 aaPredicted RBP8.51□□□□□ -1.05
HDAC9-214ENST00000441542 BPIFA3Q9BQP9 254 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 GNL3LQ9NVN8 582 aaKnown RBP8.51□□□□□ -1.05
HDAC9-214ENST00000441542 DENND2AQ9ULE3 1009 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 ODF2LQ9ULJ1 636 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 ADGRB3O60242 1522 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 NLRP6P59044 892 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 TIMM10P62072 90 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 APBA1Q02410 837 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 IFT88Q13099 833 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 NBPF9Q3BBW0 867 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 EPHA10Q5JZY3 1008 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 VPS37DQ86XT2 251 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 MSANTD4Q8NCY6 345 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 CABS1Q96KC9 395 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 LLPHQ9BRT6 129 aaKnown RBP8.51□□□□□ -1.05
HDAC9-214ENST00000441542 SELENOOQ9BVL4 669 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 TAB2Q9NYJ8 693 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 RAB21Q9UL25 225 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 SETBP1Q9Y6X0 1596 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 MLH3Q9UHC1 1453 aa8.51□□□□□ -1.05
HDAC9-214ENST00000441542 ATP5J2-PTCD1G3V325 749 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 N4BP3O15049 544 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 PRC1O43663 620 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 PTCD1O75127 700 aaKnown RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 YEATS4O95619 227 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 CDC25CP30307 473 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 HPDP32754 393 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 HDGFP51858 240 aaKnown RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 SEC24CP53992 1094 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 PIP4K2BP78356 416 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 CCDC96Q2M329 555 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 NFXL1Q6ZNB6 911 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 RALYLQ86SE5 291 aaKnown RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 CMTR1Q8N1G2 835 aaKnown RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 HNRNPLLQ8WVV9 542 aaKnown RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 ARL8AQ96BM9 186 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 RIMS1Q86UR5 1692 aaKnown RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 CPS1P31327 1500 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 LMTK2Q8IWU2 1503 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 CCDC196A0A1B0GTZ2 297 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 BTBD11A6QL63 1104 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 GRM8O00222 908 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 ATP1A1P05023 1023 aaKnown RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 PDHBP11177 359 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 CDR1P51861 262 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 KIF23Q02241 960 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 USP49Q70CQ1 688 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 KIAA1328Q86T90 577 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 CHP1Q99653 195 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 EFCAB6Q5THR3 1501 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 MED23Q9ULK4 1368 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 RPS6KA5O75582 802 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 CXCR5P32302 372 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 ELF1P32519 619 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 GUCY1A3Q02108 690 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 TTC39AQ5SRH9 613 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 TBC1D31Q96DN5 1066 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 PCMTD1Q96MG8 357 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 SEC31BQ9NQW1 1179 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 MAP2P11137 1827 aaKnown RBP8.5□□□□□ -1.05
HDAC9-214ENST00000441542 PRR36Q9H6K5 1346 aa8.5□□□□□ -1.05
HDAC9-214ENST00000441542 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 SETD1BQ9UPS6 1966 aaKnown RBP8.49□□□□□ -1.05
HDAC9-214ENST00000441542 EDC4Q6P2E9 1401 aaKnown RBP8.49□□□□□ -1.05
HDAC9-214ENST00000441542 USP5P45974 858 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 GSCP56915 257 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms