RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 BTAF1O14981 1849 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 STX10O60499 249 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 CMA1P23946 247 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 EN1Q05925 392 aaPredicted RBP13.62□□□□□ -0.23
LTBR-203ENST00000441074 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 BICDL1Q6ZP65 573 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 BAG1Q99933 345 aaPredicted RBP13.62□□□□□ -0.23
LTBR-203ENST00000441074 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
LTBR-203ENST00000441074 BRMS1Q9HCU9 246 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 SPEF2Q9C093 1822 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 POTEB2H3BUK9 544 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 PDIA3P30101 505 aaKnown RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 USP5P45974 858 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 TBX2Q13207 712 aaPredicted RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 HDXQ7Z353 690 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 DHX58Q96C10 678 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 GPR108Q9NPR9 543 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 IRS4O14654 1257 aaPredicted RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 PCCAP05165 728 aaPredicted RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 FDPSP14324 419 aaKnown RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 GOLGA8FQ08AF8 430 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 GOLGA8DPQ0D2H9 430 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 CCDC57Q2TAC2 916 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 BEND6Q5SZJ8 279 aaPredicted RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 AXDND1Q5T1B0 1012 aaPredicted RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 CCDC125Q86Z20 511 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 SMARCC1Q92922 1105 aaPredicted RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
LTBR-203ENST00000441074 PDE11AQ9HCR9 933 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 VPS18Q9P253 973 aa13.61□□□□□ -0.23
LTBR-203ENST00000441074 TMEM232C9JQI7 657 aa13.6□□□□□ -0.23
LTBR-203ENST00000441074 EIF3JO75822 258 aaKnown RBP13.6□□□□□ -0.23
LTBR-203ENST00000441074 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
LTBR-203ENST00000441074 PFKFB1P16118 471 aa13.6□□□□□ -0.23
LTBR-203ENST00000441074 BRAPQ7Z569 592 aa13.6□□□□□ -0.23
LTBR-203ENST00000441074 CCDC24Q8N4L8 307 aa13.6□□□□□ -0.23
LTBR-203ENST00000441074 MKRN1Q9UHC7 482 aaKnown RBP13.6□□□□□ -0.23
LTBR-203ENST00000441074 RAB21Q9UL25 225 aa13.6□□□□□ -0.23
LTBR-203ENST00000441074 SNAP23O00161 211 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 PLSCR1O15162 318 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 BAG6P46379 1132 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 TUBB4BP68371 445 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
LTBR-203ENST00000441074 MYSM1Q5VVJ2 828 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 SRGAP1Q7Z6B7 1085 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 FBXL16Q8N461 479 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 RGS22Q8NE09 1264 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 TTLL11Q8NHH1 800 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 ITGA6P23229 1130 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 CHMP4BP1P59074 171 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 EZH2Q15910 746 aaKnown RBP13.59□□□□□ -0.23
LTBR-203ENST00000441074 ISM2Q6H9L7 571 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 DDX46Q7L014 1031 aaKnown RBP13.59□□□□□ -0.23
LTBR-203ENST00000441074 ZNF34Q8IZ26 560 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 PROM2Q8N271 834 aa13.59□□□□□ -0.23
LTBR-203ENST00000441074 SRP68Q9UHB9 627 aaKnown RBP13.59□□□□□ -0.23
LTBR-203ENST00000441074 NIP7Q9Y221 180 aaKnown RBP eCLIP13.59□□□□□ -0.23
LTBR-203ENST00000441074 EYA2O00167 538 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 CUTAO60888 179 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 ERLIN1O75477 346 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 GUCY2CP25092 1073 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 ZMYM1Q5SVZ6 1142 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 SYNE3Q6ZMZ3 975 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 TOGARAM2Q6ZUX3 1019 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 MSANTD4Q8NCY6 345 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 ANKZF1Q9H8Y5 726 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 PAG1Q9NWQ8 432 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 JRKLQ9Y4A0 524 aa13.58□□□□□ -0.23
LTBR-203ENST00000441074 NUP188Q5SRE5 1749 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 TNS1Q9HBL0 1735 aaKnown RBP13.58□□□□□ -0.24
LTBR-203ENST00000441074 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.24
LTBR-203ENST00000441074 IFIT5Q13325 482 aaKnown RBP13.58□□□□□ -0.24
LTBR-203ENST00000441074 MCM6Q14566 821 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 TXNRD1Q16881 649 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 ANO1Q5XXA6 986 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 OLFM4Q6UX06 510 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 CEP112Q8N8E3 955 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.24
LTBR-203ENST00000441074 CCDC12Q8WUD4 166 aaPredicted RBP13.58□□□□□ -0.24
LTBR-203ENST00000441074 C8orf76Q96K31 380 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 INTS13Q9NVM9 706 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 FANCLQ9NW38 375 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 L1RE1Q9UN81 338 aa13.58□□□□□ -0.24
LTBR-203ENST00000441074 EIF3CLB5ME19 914 aaKnown RBP13.57□□□□□ -0.24
LTBR-203ENST00000441074 ERVV-1B6SEH8 477 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 PPFIA3O75145 1194 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 ADORA1P30542 326 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 SYKP43405 635 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 TUBB2AQ13885 445 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 TC2NQ8N9U0 490 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 CAMKK2Q96RR4 588 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 EIF3CQ99613 913 aaKnown RBP13.57□□□□□ -0.24
LTBR-203ENST00000441074 TUBB2BQ9BVA1 445 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 SEC31BQ9NQW1 1179 aa13.57□□□□□ -0.24
LTBR-203ENST00000441074 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
LTBR-203ENST00000441074 E7EWF7 191 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms