RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 TRDNQ13061 729 aa12.19□□□□□ -0.46
AP004290.1-201ENST00000440915 FKBP1CQ5VVH2 108 aa12.19□□□□□ -0.46
AP004290.1-201ENST00000440915 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
AP004290.1-201ENST00000440915 TRPM4Q8TD43 1214 aa12.19□□□□□ -0.46
AP004290.1-201ENST00000440915 FAM151AQ8WW52 585 aa12.19□□□□□ -0.46
AP004290.1-201ENST00000440915 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
AP004290.1-201ENST00000440915 VEZTQ9HBM0 779 aa12.19□□□□□ -0.46
AP004290.1-201ENST00000440915 ADARB2Q9NS39 739 aaKnown RBP12.19□□□□□ -0.46
AP004290.1-201ENST00000440915 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 DDTLA6NHG4 134 aaPredicted RBP12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 FGRP09769 529 aa12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 SH3BP5LQ7L8J4 393 aa12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 RALYLQ86SE5 291 aaKnown RBP12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 MB21D2Q8IYB1 491 aaPredicted RBP12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 IL27Q8NEV9 243 aa12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 DYNLL2Q96FJ2 89 aa12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 TTC14Q96N46 770 aa12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 KRT23Q9C075 422 aa12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 DHX36Q9H2U1 1008 aaKnown RBP12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 HACL1Q9UJ83 578 aa12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
AP004290.1-201ENST00000440915 ASTN2O75129 1339 aaPredicted RBP12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 COL2A1P02458 1487 aaPredicted RBP12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 B4E1Z4 1266 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 ST18O60284 1047 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 HLA-DOAP06340 250 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 TNNI2P48788 182 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 HIRAP54198 1017 aaPredicted RBP12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 EXOSC10Q01780 885 aaKnown RBP12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 PDE4BQ07343 736 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 RRP12Q5JTH9 1297 aaKnown RBP12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 C16orf86Q6ZW13 317 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 CYB5R4Q7L1T6 521 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 DHX32Q7L7V1 743 aaKnown RBP12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 FAM83AQ86UY5 434 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 ZSCAN29Q8IWY8 852 aaPredicted RBP12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 NKX2-3Q8TAU0 364 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 TOMM22Q9NS69 142 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 PDRG1Q9NUG6 133 aa12.17□□□□□ -0.46
AP004290.1-201ENST00000440915 ATRNL1Q5VV63 1379 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 ORC4O43929 436 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 CD2BP2O95400 341 aaKnown RBP12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 MCM5P33992 734 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 CDK8P49336 464 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 CHST3Q7LGC8 479 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 SNX21Q969T3 373 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 TCEANC2Q96MN5 208 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 EHD4Q9H223 541 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 ALDH8A1Q9H2A2 487 aaPredicted RBP12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 PI4KBQ9UBF8 816 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 WDR90Q96KV7 1748 aa12.16□□□□□ -0.46
AP004290.1-201ENST00000440915 POTECB2RU33 542 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 PRC1O43663 620 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 KDM4AO75164 1064 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 PRDM1O75626 825 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 AK2P54819 239 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 ANTXR2P58335 489 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 GABPAQ06546 454 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 RASA3Q14644 834 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 ANGEL2Q5VTE6 544 aaKnown RBP12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 Q6ZUG5 572 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 USP50Q70EL3 339 aaPredicted RBP12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 FOXP4Q8IVH2 680 aaPredicted RBP12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 SLC44A5Q8NCS7 719 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 ESR2Q92731 530 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 MKNK2Q9HBH9 465 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 ZNF287Q9HBT7 754 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 ZSWIM5Q9P217 1185 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 PGAP2Q9UHJ9 254 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 SERPINB13Q9UIV8 391 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 SCAF8Q9UPN6 1271 aaKnown RBP12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 WDR19Q8NEZ3 1342 aa12.15□□□□□ -0.46
AP004290.1-201ENST00000440915 SIPA1L1O43166 1804 aa12.15□□□□□ -0.47
AP004290.1-201ENST00000440915 IQCA1LA6NCM1 817 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 RANBP6O60518 1105 aaKnown RBP12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 RASA1P20936 1047 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 EPHX2P34913 555 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 TNFAIP1Q13829 316 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 APOBEC3FQ8IUX4 373 aaKnown RBP12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 ZNF444Q8N0Y2 327 aaPredicted RBP12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 CRACR2BQ8N4Y2 399 aaPredicted RBP12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 CSRNP1Q96S65 589 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 LRRC2Q9BYS8 371 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 TBC1D2Q9BYX2 928 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 TMEM39BQ9GZU3 492 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 GGA3Q9NZ52 723 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 SWAP70Q9UH65 585 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 SCN4AP35499 1836 aa12.14□□□□□ -0.47
AP004290.1-201ENST00000440915 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
AP004290.1-201ENST00000440915 NT5C2P49902 561 aa12.13□□□□□ -0.47
AP004290.1-201ENST00000440915 TOB2Q14106 344 aaPredicted RBP12.13□□□□□ -0.47
AP004290.1-201ENST00000440915 BECN1Q14457 450 aa12.13□□□□□ -0.47
AP004290.1-201ENST00000440915 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
AP004290.1-201ENST00000440915 HSCBQ8IWL3 235 aa12.13□□□□□ -0.47
AP004290.1-201ENST00000440915 CDAN1Q8IWY9 1227 aa12.13□□□□□ -0.47
AP004290.1-201ENST00000440915 TAF1DQ9H5J8 278 aaPredicted RBP12.13□□□□□ -0.47
AP004290.1-201ENST00000440915 DNAJC18Q9H819 358 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms