RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 COL4A1P02462 1669 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 TCRBV5S4A2TA0A5A2 114 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 PTPDC1A2A3K4 754 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 KLRG2A4D1S0 409 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-209ENST00000440653 H3BQV1 296 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 FOXP2O15409 715 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 CDKL5O76039 1030 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 NT5C2P49902 561 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 CHRNDQ07001 517 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 CXCL9Q07325 125 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 SCRN1Q12765 414 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 RASAL3Q86YV0 1011 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 NSUN7Q8NE18 718 aaKnown RBP10.7□□□□□ -0.7
HDAC6-209ENST00000440653 LRCH3Q96II8 777 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 NACAP1Q9BZK3 213 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 PUS7LQ9H0K6 701 aaKnown RBP10.7□□□□□ -0.7
HDAC6-209ENST00000440653 TSPY26PQ9H489 355 aa10.7□□□□□ -0.7
HDAC6-209ENST00000440653 PIH1D3Q9NQM4 214 aaKnown RBP10.7□□□□□ -0.7
HDAC6-209ENST00000440653 ADM5C9JUS6 153 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 PRC1O43663 620 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 FGAP02671 866 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 CHGBP05060 677 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 RCAN1P53805 252 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 PI16Q6UXB8 463 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 GAS2L3Q86XJ1 694 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 NIM1KQ8IY84 436 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 TRIM44Q96DX7 344 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-209ENST00000440653 TMEM87BQ96K49 555 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 LARP6Q9BRS8 491 aaKnown RBP10.69□□□□□ -0.7
HDAC6-209ENST00000440653 ANKRD2Q9GZV1 360 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 CFAP45Q9UL16 551 aa10.69□□□□□ -0.7
HDAC6-209ENST00000440653 SPTBN5Q9NRC6 3674 aaKnown RBP10.69□□□□□ -0.7
HDAC6-209ENST00000440653 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-209ENST00000440653 TAF1P21675 1872 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 SYCE3A1L190 88 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 GOLGA8BA8MQT2 603 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 FKTNO75072 461 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
HDAC6-209ENST00000440653 GTF2E1P29083 439 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-209ENST00000440653 DNM1Q05193 864 aaKnown RBP10.68□□□□□ -0.7
HDAC6-209ENST00000440653 RESTQ13127 1097 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 STK3Q13188 491 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 CAVIN4Q5BKX8 364 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 CPLX2Q6PUV4 134 aaKnown RBP10.68□□□□□ -0.7
HDAC6-209ENST00000440653 NBPF5PQ86XG9 351 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-209ENST00000440653 PPP1R9BQ96SB3 815 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 KRT23Q9C075 422 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 NAPBQ9H115 298 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 RNF41Q9H4P4 317 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-209ENST00000440653 SEC31BQ9NQW1 1179 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 PRDM6Q9NQX0 595 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 DDX19AQ9NUU7 478 aaKnown RBP10.68□□□□□ -0.7
HDAC6-209ENST00000440653 DENND2AQ9ULE3 1009 aa10.68□□□□□ -0.7
HDAC6-209ENST00000440653 ANGEL1Q9UNK9 670 aaKnown RBP10.68□□□□□ -0.7
HDAC6-209ENST00000440653 STK36Q9NRP7 1315 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 MYH6P13533 1939 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 MBD4O95243 580 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 PDIA3P30101 505 aaKnown RBP10.67□□□□□ -0.7
HDAC6-209ENST00000440653 APOBRQ0VD83 1088 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 SART3Q15020 963 aaKnown RBP10.67□□□□□ -0.7
HDAC6-209ENST00000440653 AOC3Q16853 763 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 HS1BP3Q53T59 392 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 KRT26Q7Z3Y9 468 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 REM2Q8IYK8 340 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-209ENST00000440653 MAGEB6Q8N7X4 407 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 ZNF396Q96N95 335 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-209ENST00000440653 NLRP3Q96P20 1036 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 STRBPQ96SI9 672 aaKnown RBP10.67□□□□□ -0.7
HDAC6-209ENST00000440653 PANK2Q9BZ23 570 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 PRO3102Q9H379 93 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 RAPGEFL1Q9UHV5 662 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 TRIM17Q9Y577 477 aa10.67□□□□□ -0.7
HDAC6-209ENST00000440653 DDX60LQ5H9U9 1706 aaKnown RBP10.67□□□□□ -0.7
HDAC6-209ENST00000440653 KLF18A0A0U1RQI7 1052 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 GOLGA6L4A6NEF3 574 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 FAM177BA6PVY3 158 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-209ENST00000440653 PPIP5K2O43314 1243 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 JAK2O60674 1132 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 EGFRP00533 1210 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 ALDH1B1P30837 517 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 UVSSAQ2YD98 709 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 NOM1Q5C9Z4 860 aaKnown RBP10.66□□□□□ -0.7
HDAC6-209ENST00000440653 TTLL5Q6EMB2 1281 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 TPTE2Q6XPS3 522 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 SAMD7Q7Z3H4 446 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 BRAPQ7Z569 592 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 STAG1Q8WVM7 1258 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 SPATA32Q96LK8 384 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 GDPD2Q9HCC8 539 aa10.66□□□□□ -0.7
HDAC6-209ENST00000440653 CNOT7Q9UIV1 285 aaKnown RBP10.66□□□□□ -0.7
HDAC6-209ENST00000440653 PATL2C9JE40 543 aaKnown RBP10.65□□□□□ -0.7
HDAC6-209ENST00000440653 CPLX1O14810 134 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 RAD17O75943 681 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 APPP05067 770 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 COL9A1P20849 921 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 LIFRP42702 1097 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 ANTXR2P58335 489 aa10.65□□□□□ -0.7
HDAC6-209ENST00000440653 HAND2P61296 217 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms