RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 FAM198AQ9UFP1 575 aa32.94■■■□□ 2.86
CGREF1-207ENST00000440612 BRPF3Q9ULD4 1205 aa32.94■■■□□ 2.86
CGREF1-207ENST00000440612 ZFPM1Q8IX07 1006 aa32.93■■■□□ 2.86
CGREF1-207ENST00000440612 ESR2Q92731 530 aa32.93■■■□□ 2.86
CGREF1-207ENST00000440612 TDRD3Q9H7E2 651 aaKnown RBP32.93■■■□□ 2.86
CGREF1-207ENST00000440612 TOMM22Q9NS69 142 aa32.93■■■□□ 2.86
CGREF1-207ENST00000440612 HDAC9Q9UKV0 1011 aa32.93■■■□□ 2.86
CGREF1-207ENST00000440612 MYH1P12882 1939 aa32.93■■■□□ 2.86
CGREF1-207ENST00000440612 ZNF541Q9H0D2 1346 aa32.92■■■□□ 2.86
CGREF1-207ENST00000440612 SHTN1A0MZ66 631 aa32.92■■■□□ 2.86
CGREF1-207ENST00000440612 NPM3O75607 178 aaKnown RBP32.92■■■□□ 2.86
CGREF1-207ENST00000440612 SLC3A2P08195 630 aaKnown RBP32.92■■■□□ 2.86
CGREF1-207ENST00000440612 OGFOD1Q8N543 542 aa32.92■■■□□ 2.86
CGREF1-207ENST00000440612 ANGEL1Q9UNK9 670 aaKnown RBP32.92■■■□□ 2.86
CGREF1-207ENST00000440612 CCDC83Q8IWF9 413 aa32.91■■■□□ 2.86
CGREF1-207ENST00000440612 MTA3Q9BTC8 594 aa32.91■■■□□ 2.86
CGREF1-207ENST00000440612 LY9Q9HBG7 655 aa32.91■■■□□ 2.86
CGREF1-207ENST00000440612 RPS12P25398 132 aaKnown RBP32.91■■■□□ 2.86
CGREF1-207ENST00000440612 ZNF280AP59817 542 aaPredicted RBP32.91■■■□□ 2.86
CGREF1-207ENST00000440612 AMOTL1Q8IY63 956 aa32.91■■■□□ 2.86
CGREF1-207ENST00000440612 SLC44A5Q8NCS7 719 aa32.91■■■□□ 2.86
CGREF1-207ENST00000440612 ZNF274Q96GC6 653 aaPredicted RBP32.91■■■□□ 2.86
CGREF1-207ENST00000440612 SBF1O95248 1867 aa32.9■■■□□ 2.86
CGREF1-207ENST00000440612 PFKFB2O60825 505 aa32.9■■■□□ 2.86
CGREF1-207ENST00000440612 PDIA3P30101 505 aaKnown RBP32.9■■■□□ 2.86
CGREF1-207ENST00000440612 EIF6P56537 245 aaKnown RBP32.9■■■□□ 2.86
CGREF1-207ENST00000440612 PDE4BQ07343 736 aa32.9■■■□□ 2.86
CGREF1-207ENST00000440612 C16orf86Q6ZW13 317 aa32.9■■■□□ 2.86
CGREF1-207ENST00000440612 DICER1Q9UPY3 1922 aaKnown RBP32.89■■■□□ 2.86
CGREF1-207ENST00000440612 GABPAQ06546 454 aa32.89■■■□□ 2.86
CGREF1-207ENST00000440612 GTF3C6Q969F1 213 aa32.89■■■□□ 2.86
CGREF1-207ENST00000440612 LIFRP42702 1097 aa32.88■■■□□ 2.85
CGREF1-207ENST00000440612 STK3Q13188 491 aa32.88■■■□□ 2.85
CGREF1-207ENST00000440612 DLGAP5Q15398 846 aa32.88■■■□□ 2.85
CGREF1-207ENST00000440612 SGMS1Q86VZ5 419 aa32.88■■■□□ 2.85
CGREF1-207ENST00000440612 ZKSCAN3Q9BRR0 538 aa32.88■■■□□ 2.85
CGREF1-207ENST00000440612 CWC22Q9HCG8 908 aaKnown RBP32.88■■■□□ 2.85
CGREF1-207ENST00000440612 RANBP6O60518 1105 aaKnown RBP32.88■■■□□ 2.85
CGREF1-207ENST00000440612 SCRN1Q12765 414 aa32.88■■■□□ 2.85
CGREF1-207ENST00000440612 SEC23AQ15436 765 aa32.88■■■□□ 2.85
CGREF1-207ENST00000440612 TMEM67Q5HYA8 995 aa32.88■■■□□ 2.85
CGREF1-207ENST00000440612 HPS5Q9UPZ3 1129 aa32.88■■■□□ 2.85
CGREF1-207ENST00000440612 IFIT3O14879 490 aaKnown RBP32.87■■■□□ 2.85
CGREF1-207ENST00000440612 GMPSP49915 693 aaPredicted RBP32.87■■■□□ 2.85
CGREF1-207ENST00000440612 SH3BP5LQ7L8J4 393 aa32.87■■■□□ 2.85
CGREF1-207ENST00000440612 DPF2Q92785 391 aa32.87■■■□□ 2.85
CGREF1-207ENST00000440612 CIZ1Q9ULV3 898 aaPredicted RBP32.87■■■□□ 2.85
CGREF1-207ENST00000440612 CDK8P49336 464 aa32.86■■■□□ 2.85
CGREF1-207ENST00000440612 CHMP5Q9NZZ3 219 aa32.86■■■□□ 2.85
CGREF1-207ENST00000440612 KLF18A0A0U1RQI7 1052 aa32.85■■■□□ 2.85
CGREF1-207ENST00000440612 RASA1P20936 1047 aa32.85■■■□□ 2.85
CGREF1-207ENST00000440612 MMP14P50281 582 aa32.85■■■□□ 2.85
CGREF1-207ENST00000440612 FAM47AQ5JRC9 791 aa32.85■■■□□ 2.85
CGREF1-207ENST00000440612 TTC6Q86TZ1 520 aa32.85■■■□□ 2.85
CGREF1-207ENST00000440612 MYOZ2Q9NPC6 264 aa32.85■■■□□ 2.85
CGREF1-207ENST00000440612 DTNBO60941 627 aa32.85■■■□□ 2.85
CGREF1-207ENST00000440612 NT5C2P49902 561 aa32.85■■■□□ 2.85
CGREF1-207ENST00000440612 SPDYE2Q495Y8 402 aa32.85■■■□□ 2.85
CGREF1-207ENST00000440612 ZSCAN10Q96SZ4 725 aaPredicted RBP32.85■■■□□ 2.85
CGREF1-207ENST00000440612 ZNF70Q9UC06 446 aaPredicted RBP32.85■■■□□ 2.85
CGREF1-207ENST00000440612 EGFRP00533 1210 aa32.84■■■□□ 2.85
CGREF1-207ENST00000440612 TCP10Q12799 353 aa32.84■■■□□ 2.85
CGREF1-207ENST00000440612 ZSCAN21Q9Y5A6 473 aaPredicted RBP32.84■■■□□ 2.85
CGREF1-207ENST00000440612 GJA3Q9Y6H8 435 aa32.84■■■□□ 2.85
CGREF1-207ENST00000440612 TNKSO95271 1327 aa32.84■■■□□ 2.85
CGREF1-207ENST00000440612 DDTLA6NHG4 134 aaPredicted RBP32.83■■■□□ 2.85
CGREF1-207ENST00000440612 WNT10BO00744 389 aa32.83■■■□□ 2.85
CGREF1-207ENST00000440612 ENTPD3O75355 529 aa32.83■■■□□ 2.85
CGREF1-207ENST00000440612 ENAHQ8N8S7 591 aaPredicted RBP32.83■■■□□ 2.85
CGREF1-207ENST00000440612 SIPA1L1O43166 1804 aa32.83■■■□□ 2.85
CGREF1-207ENST00000440612 APOA5Q6Q788 366 aa32.82■■■□□ 2.84
CGREF1-207ENST00000440612 ATRNL1Q5VV63 1379 aa32.82■■■□□ 2.84
CGREF1-207ENST00000440612 COL2A1P02458 1487 aaPredicted RBP32.82■■■□□ 2.84
CGREF1-207ENST00000440612 CLRN2A0PK11 232 aa32.82■■■□□ 2.84
CGREF1-207ENST00000440612 SART3Q15020 963 aaKnown RBP32.82■■■□□ 2.84
CGREF1-207ENST00000440612 NBPF9Q3BBW0 867 aa32.82■■■□□ 2.84
CGREF1-207ENST00000440612 UBAC1Q9BSL1 405 aa32.82■■■□□ 2.84
CGREF1-207ENST00000440612 EHD4Q9H223 541 aa32.82■■■□□ 2.84
CGREF1-207ENST00000440612 MKNK2Q9HBH9 465 aa32.82■■■□□ 2.84
CGREF1-207ENST00000440612 NCOA5Q9HCD5 579 aaKnown RBP32.82■■■□□ 2.84
CGREF1-207ENST00000440612 NMT2O60551 498 aa32.81■■■□□ 2.84
CGREF1-207ENST00000440612 CCT2P78371 535 aaKnown RBP32.81■■■□□ 2.84
CGREF1-207ENST00000440612 MICALL2Q8IY33 904 aa32.81■■■□□ 2.84
CGREF1-207ENST00000440612 DHX36Q9H2U1 1008 aaKnown RBP32.81■■■□□ 2.84
CGREF1-207ENST00000440612 IL17RBQ9NRM6 502 aa32.81■■■□□ 2.84
CGREF1-207ENST00000440612 CNTNAP1P78357 1384 aa32.8■■■□□ 2.84
CGREF1-207ENST00000440612 GOLGA8BA8MQT2 603 aa32.8■■■□□ 2.84
CGREF1-207ENST00000440612 CTDNEP1O95476 244 aa32.8■■■□□ 2.84
CGREF1-207ENST00000440612 TFAP4Q01664 338 aa32.8■■■□□ 2.84
CGREF1-207ENST00000440612 PKP1Q13835 747 aa32.8■■■□□ 2.84
CGREF1-207ENST00000440612 WTAPQ15007 396 aa32.8■■■□□ 2.84
CGREF1-207ENST00000440612 CNOT7Q9UIV1 285 aaKnown RBP32.8■■■□□ 2.84
CGREF1-207ENST00000440612 SERPINB13Q9UIV8 391 aa32.8■■■□□ 2.84
CGREF1-207ENST00000440612 SLURP2P0DP57 97 aa32.79■■■□□ 2.84
CGREF1-207ENST00000440612 FKBP1CQ5VVH2 108 aa32.79■■■□□ 2.84
CGREF1-207ENST00000440612 IQCA1Q86XH1 822 aa32.79■■■□□ 2.84
CGREF1-207ENST00000440612 DNAJC18Q9H819 358 aa32.79■■■□□ 2.84
CGREF1-207ENST00000440612 TSPY2A6NKD2 308 aa32.78■■■□□ 2.84
CGREF1-207ENST00000440612 SOCS7O14512 581 aa32.78■■■□□ 2.84
CGREF1-207ENST00000440612 RCSD1Q6JBY9 416 aa32.78■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms