RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 SPTBN5Q9NRC6 3674 aaKnown RBP16.53■□□□□ 0.24
FAM3A-213ENST00000440318 CTNND1O60716 968 aaKnown RBP16.53■□□□□ 0.24
FAM3A-213ENST00000440318 ENTPD3O75355 529 aa16.53■□□□□ 0.24
FAM3A-213ENST00000440318 LDHBP07195 334 aaKnown RBP16.53■□□□□ 0.24
FAM3A-213ENST00000440318 ZSCAN29Q8IWY8 852 aaPredicted RBP16.53■□□□□ 0.24
FAM3A-213ENST00000440318 TNNQ9UQP3 1299 aa16.53■□□□□ 0.24
FAM3A-213ENST00000440318 COL2A1P02458 1487 aaPredicted RBP16.53■□□□□ 0.24
FAM3A-213ENST00000440318 POTEB2H3BUK9 544 aa16.52■□□□□ 0.24
FAM3A-213ENST00000440318 SLC5A1P13866 664 aa16.52■□□□□ 0.24
FAM3A-213ENST00000440318 MDM2Q00987 491 aaPredicted RBP16.52■□□□□ 0.24
FAM3A-213ENST00000440318 FAM161BQ96MY7 647 aa16.52■□□□□ 0.24
FAM3A-213ENST00000440318 DDX4Q9NQI0 724 aaKnown RBP16.52■□□□□ 0.24
FAM3A-213ENST00000440318 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
FAM3A-213ENST00000440318 COL6A1P12109 1028 aa16.51■□□□□ 0.23
FAM3A-213ENST00000440318 MAP3K21Q5TCX8 1036 aa16.51■□□□□ 0.23
FAM3A-213ENST00000440318 LPIN2Q92539 896 aa16.51■□□□□ 0.23
FAM3A-213ENST00000440318 PRUNE2Q8WUY3 3088 aa16.51■□□□□ 0.23
FAM3A-213ENST00000440318 MYH2Q9UKX2 1941 aa16.51■□□□□ 0.23
FAM3A-213ENST00000440318 GAKO14976 1311 aa16.5■□□□□ 0.23
FAM3A-213ENST00000440318 SALL1Q9NSC2 1324 aa16.5■□□□□ 0.23
FAM3A-213ENST00000440318 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
FAM3A-213ENST00000440318 PRKAR2AP13861 404 aaKnown RBP16.5■□□□□ 0.23
FAM3A-213ENST00000440318 LRRC26Q2I0M4 334 aa16.5■□□□□ 0.23
FAM3A-213ENST00000440318 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
FAM3A-213ENST00000440318 EYA2O00167 538 aa16.49■□□□□ 0.23
FAM3A-213ENST00000440318 PEX10O60683 326 aa16.49■□□□□ 0.23
FAM3A-213ENST00000440318 CYP2B6P20813 491 aa16.49■□□□□ 0.23
FAM3A-213ENST00000440318 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
FAM3A-213ENST00000440318 GCLCP48506 637 aaPredicted RBP16.49■□□□□ 0.23
FAM3A-213ENST00000440318 SPP2Q13103 211 aa16.49■□□□□ 0.23
FAM3A-213ENST00000440318 PICALMQ13492 652 aa16.49■□□□□ 0.23
FAM3A-213ENST00000440318 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
FAM3A-213ENST00000440318 FAM109BQ6ICB4 259 aaPredicted RBP16.49■□□□□ 0.23
FAM3A-213ENST00000440318 DNAH12Q6ZR08 3092 aa16.49■□□□□ 0.23
FAM3A-213ENST00000440318 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
FAM3A-213ENST00000440318 CLUAP1Q96AJ1 413 aa16.49■□□□□ 0.23
FAM3A-213ENST00000440318 ASCC2Q9H1I8 757 aaPredicted RBP16.49■□□□□ 0.23
FAM3A-213ENST00000440318 TRIM27P14373 513 aa16.48■□□□□ 0.23
FAM3A-213ENST00000440318 HMGCS2P54868 508 aa16.48■□□□□ 0.23
FAM3A-213ENST00000440318 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
FAM3A-213ENST00000440318 IPO8O15397 1037 aaKnown RBP16.47■□□□□ 0.23
FAM3A-213ENST00000440318 PHKA1P46020 1223 aa16.47■□□□□ 0.23
FAM3A-213ENST00000440318 ATF7IPQ6VMQ6 1270 aa16.47■□□□□ 0.23
FAM3A-213ENST00000440318 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
FAM3A-213ENST00000440318 BTDP43251 543 aa16.46■□□□□ 0.23
FAM3A-213ENST00000440318 RRP1BQ14684 758 aaKnown RBP16.46■□□□□ 0.23
FAM3A-213ENST00000440318 ATP2B3Q16720 1220 aa16.46■□□□□ 0.23
FAM3A-213ENST00000440318 LHX8Q68G74 356 aa16.46■□□□□ 0.23
FAM3A-213ENST00000440318 FTSJ3Q8IY81 847 aaKnown RBP16.46■□□□□ 0.23
FAM3A-213ENST00000440318 ZNF280CQ8ND82 737 aa16.46■□□□□ 0.23
FAM3A-213ENST00000440318 PRDM6Q9NQX0 595 aa16.46■□□□□ 0.23
FAM3A-213ENST00000440318 MORF4L1Q9UBU8 362 aa16.46■□□□□ 0.23
FAM3A-213ENST00000440318 MAST2Q6P0Q8 1798 aa16.46■□□□□ 0.22
FAM3A-213ENST00000440318 TBC1D12O60347 775 aa16.45■□□□□ 0.22
FAM3A-213ENST00000440318 CCND3P30281 292 aaPredicted RBP16.45■□□□□ 0.22
FAM3A-213ENST00000440318 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
FAM3A-213ENST00000440318 CACNB2Q08289 660 aaPredicted RBP16.45■□□□□ 0.22
FAM3A-213ENST00000440318 DZIP1Q86YF9 867 aaKnown RBP16.45■□□□□ 0.22
FAM3A-213ENST00000440318 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
FAM3A-213ENST00000440318 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.45■□□□□ 0.22
FAM3A-213ENST00000440318 TXNRD2Q9NNW7 524 aa16.45■□□□□ 0.22
FAM3A-213ENST00000440318 GNL3LQ9NVN8 582 aaKnown RBP16.45■□□□□ 0.22
FAM3A-213ENST00000440318 DENND2AQ9ULE3 1009 aa16.45■□□□□ 0.22
FAM3A-213ENST00000440318 SEMA3EO15041 775 aa16.44■□□□□ 0.22
FAM3A-213ENST00000440318 XRCC5P13010 732 aaKnown RBP16.44■□□□□ 0.22
FAM3A-213ENST00000440318 RHBDL3P58872 404 aa16.44■□□□□ 0.22
FAM3A-213ENST00000440318 PABPC4Q13310 644 aaKnown RBP eCLIP16.44■□□□□ 0.22
FAM3A-213ENST00000440318 CCL14Q16627 93 aa16.44■□□□□ 0.22
FAM3A-213ENST00000440318 ARHGAP45Q92619 1136 aa16.44■□□□□ 0.22
FAM3A-213ENST00000440318 CDX2Q99626 313 aaPredicted RBP16.44■□□□□ 0.22
FAM3A-213ENST00000440318 OSBPL5Q9H0X9 879 aaPredicted RBP16.44■□□□□ 0.22
FAM3A-213ENST00000440318 FRMPD3Q5JV73 1810 aa16.44■□□□□ 0.22
FAM3A-213ENST00000440318 CDH23Q9H251 3354 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 RLBP1P12271 317 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
FAM3A-213ENST00000440318 ADORA1P30542 326 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 RASGRF1Q13972 1273 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 SH3D19Q5HYK7 790 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 ZNF697Q5TEC3 545 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 SOCS4Q8WXH5 440 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 FAM163AQ96GL9 167 aaPredicted RBP16.43■□□□□ 0.22
FAM3A-213ENST00000440318 NUDT12Q9BQG2 462 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 SIL1Q9H173 461 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 MROH7-TTC4A0A0A0MT08 1334 aa16.43■□□□□ 0.22
FAM3A-213ENST00000440318 CENPBP07199 599 aaPredicted RBP16.42■□□□□ 0.22
FAM3A-213ENST00000440318 CCDC102BQ68D86 513 aa16.42■□□□□ 0.22
FAM3A-213ENST00000440318 TMEM57Q8N5G2 664 aa16.42■□□□□ 0.22
FAM3A-213ENST00000440318 MAFAQ8NHW3 353 aaPredicted RBP16.42■□□□□ 0.22
FAM3A-213ENST00000440318 ZNF384Q8TF68 577 aa16.42■□□□□ 0.22
FAM3A-213ENST00000440318 USP6NLQ92738 828 aa16.42■□□□□ 0.22
FAM3A-213ENST00000440318 ABCF2Q9UG63 623 aa16.42■□□□□ 0.22
FAM3A-213ENST00000440318 LTBP2Q14767 1821 aa16.42■□□□□ 0.22
FAM3A-213ENST00000440318 GPR75-ASB3A0A0A6YYF3 556 aa16.41■□□□□ 0.22
FAM3A-213ENST00000440318 CAP2P40123 477 aa16.41■□□□□ 0.22
FAM3A-213ENST00000440318 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
FAM3A-213ENST00000440318 MTMR2Q13614 643 aa16.41■□□□□ 0.22
FAM3A-213ENST00000440318 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
FAM3A-213ENST00000440318 ZGPATQ8N5A5 531 aaKnown RBP16.41■□□□□ 0.22
FAM3A-213ENST00000440318 P2RX7Q99572 595 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms