RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 ERICH6Q7L0X2 663 aa25.54■■□□□ 1.68
TRIM39-210ENST00000440271 ANKLE1Q8NAG6 615 aa25.54■■□□□ 1.68
TRIM39-210ENST00000440271 ZNF280CQ8ND82 737 aa25.54■■□□□ 1.68
TRIM39-210ENST00000440271 GDF15Q99988 308 aa25.54■■□□□ 1.68
TRIM39-210ENST00000440271 BMP8BP34820 402 aa25.53■■□□□ 1.68
TRIM39-210ENST00000440271 ZNF384Q8TF68 577 aa25.53■■□□□ 1.68
TRIM39-210ENST00000440271 XAGE2Q96GT9 111 aa25.53■■□□□ 1.68
TRIM39-210ENST00000440271 GJD2Q9UKL4 321 aa25.53■■□□□ 1.68
TRIM39-210ENST00000440271 A0A1B0GUL7 405 aa25.52■■□□□ 1.68
TRIM39-210ENST00000440271 HMGCS2P54868 508 aa25.52■■□□□ 1.68
TRIM39-210ENST00000440271 PABPC4Q13310 644 aaKnown RBP eCLIP25.52■■□□□ 1.68
TRIM39-210ENST00000440271 C7orf61Q8IZ16 206 aa25.52■■□□□ 1.68
TRIM39-210ENST00000440271 RPTORQ8N122 1335 aa25.52■■□□□ 1.68
TRIM39-210ENST00000440271 TBC1D2Q9BYX2 928 aa25.51■■□□□ 1.67
TRIM39-210ENST00000440271 ASCC2Q9H1I8 757 aaPredicted RBP25.51■■□□□ 1.67
TRIM39-210ENST00000440271 HMX1Q9NP08 348 aaPredicted RBP25.51■■□□□ 1.67
TRIM39-210ENST00000440271 NOB1Q9ULX3 412 aaKnown RBP25.51■■□□□ 1.67
TRIM39-210ENST00000440271 AKAP2Q9Y2D5 859 aa25.51■■□□□ 1.67
TRIM39-210ENST00000440271 CAP2P40123 477 aa25.5■■□□□ 1.67
TRIM39-210ENST00000440271 TFCP2Q12800 502 aa25.5■■□□□ 1.67
TRIM39-210ENST00000440271 TRIM32Q13049 653 aa25.5■■□□□ 1.67
TRIM39-210ENST00000440271 RRP1BQ14684 758 aaKnown RBP25.5■■□□□ 1.67
TRIM39-210ENST00000440271 MVPQ14764 893 aaKnown RBP25.5■■□□□ 1.67
TRIM39-210ENST00000440271 LAMA3Q16787 3333 aa25.5■■□□□ 1.67
TRIM39-210ENST00000440271 ALPK3Q96L96 1907 aa25.5■■□□□ 1.67
TRIM39-210ENST00000440271 NBPF3Q9H094 633 aa25.5■■□□□ 1.67
TRIM39-210ENST00000440271 ZMYND8Q9ULU4 1186 aaPredicted RBP25.5■■□□□ 1.67
TRIM39-210ENST00000440271 MAP4K4O95819 1239 aaPredicted RBP25.49■■□□□ 1.67
TRIM39-210ENST00000440271 LDHCP07864 332 aa25.49■■□□□ 1.67
TRIM39-210ENST00000440271 MNX1P50219 401 aaPredicted RBP25.49■■□□□ 1.67
TRIM39-210ENST00000440271 SH3D19Q5HYK7 790 aa25.49■■□□□ 1.67
TRIM39-210ENST00000440271 HMG20BQ9P0W2 317 aa25.49■■□□□ 1.67
TRIM39-210ENST00000440271 COL6A3P12111 3177 aa25.48■■□□□ 1.67
TRIM39-210ENST00000440271 USP17L5A8MUK1 530 aa25.48■■□□□ 1.67
TRIM39-210ENST00000440271 GSTO1P78417 241 aa25.48■■□□□ 1.67
TRIM39-210ENST00000440271 TBC1D9Q6ZT07 1266 aa25.48■■□□□ 1.67
TRIM39-210ENST00000440271 NSUN4Q96CB9 384 aaKnown RBP25.48■■□□□ 1.67
TRIM39-210ENST00000440271 CDCA7LQ96GN5 454 aa25.48■■□□□ 1.67
TRIM39-210ENST00000440271 MEIS3Q99687 375 aa25.48■■□□□ 1.67
TRIM39-210ENST00000440271 GPR153Q6NV75 609 aa25.47■■□□□ 1.67
TRIM39-210ENST00000440271 NEUROD6Q96NK8 337 aa25.47■■□□□ 1.67
TRIM39-210ENST00000440271 API5Q9BZZ5 524 aaKnown RBP25.47■■□□□ 1.67
TRIM39-210ENST00000440271 C11orf49Q9H6J7 331 aa25.47■■□□□ 1.67
TRIM39-210ENST00000440271 MORF4L1Q9UBU8 362 aa25.47■■□□□ 1.67
TRIM39-210ENST00000440271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.47■■□□□ 1.67
TRIM39-210ENST00000440271 PI16Q6UXB8 463 aa25.46■■□□□ 1.67
TRIM39-210ENST00000440271 SPATA5Q8NB90 893 aa25.46■■□□□ 1.67
TRIM39-210ENST00000440271 TRIB2Q92519 343 aa25.46■■□□□ 1.67
TRIM39-210ENST00000440271 AS3MTQ9HBK9 375 aa25.46■■□□□ 1.67
TRIM39-210ENST00000440271 OGDHLQ9ULD0 1010 aa25.46■■□□□ 1.67
TRIM39-210ENST00000440271 LOC285556D6RIA3 1793 aa25.46■■□□□ 1.67
TRIM39-210ENST00000440271 COL2A1P02458 1487 aaPredicted RBP25.46■■□□□ 1.67
TRIM39-210ENST00000440271 SYN1P17600 705 aa25.45■■□□□ 1.66
TRIM39-210ENST00000440271 RAI14Q9P0K7 980 aa25.45■■□□□ 1.66
TRIM39-210ENST00000440271 HERC5Q9UII4 1024 aaKnown RBP25.45■■□□□ 1.66
TRIM39-210ENST00000440271 ZNF316A6NFI3 1004 aaPredicted RBP25.44■■□□□ 1.66
TRIM39-210ENST00000440271 SRGAP3O43295 1099 aa25.44■■□□□ 1.66
TRIM39-210ENST00000440271 CYP2B6P20813 491 aa25.44■■□□□ 1.66
TRIM39-210ENST00000440271 DEFB123Q8N688 67 aa25.44■■□□□ 1.66
TRIM39-210ENST00000440271 WDR18Q9BV38 432 aa25.44■■□□□ 1.66
TRIM39-210ENST00000440271 A0A0C4DFX4 3053 aa25.43■■□□□ 1.66
TRIM39-210ENST00000440271 MAGEA10P43363 369 aaPredicted RBP25.43■■□□□ 1.66
TRIM39-210ENST00000440271 LRIT3Q3SXY7 679 aa25.43■■□□□ 1.66
TRIM39-210ENST00000440271 GORABQ5T7V8 394 aa25.43■■□□□ 1.66
TRIM39-210ENST00000440271 MAP3K21Q5TCX8 1036 aa25.43■■□□□ 1.66
TRIM39-210ENST00000440271 TEX11Q8IYF3 940 aa25.43■■□□□ 1.66
TRIM39-210ENST00000440271 TRMT2AQ8IZ69 625 aaKnown RBP25.43■■□□□ 1.66
TRIM39-210ENST00000440271 P2RX7Q99572 595 aaKnown RBP25.43■■□□□ 1.66
TRIM39-210ENST00000440271 PI4KBQ9UBF8 816 aa25.43■■□□□ 1.66
TRIM39-210ENST00000440271 BACE1P56817 501 aa25.42■■□□□ 1.66
TRIM39-210ENST00000440271 IRX3P78415 501 aaPredicted RBP25.42■■□□□ 1.66
TRIM39-210ENST00000440271 MTMR2Q13614 643 aa25.42■■□□□ 1.66
TRIM39-210ENST00000440271 PEX10O60683 326 aa25.41■■□□□ 1.66
TRIM39-210ENST00000440271 CT47B1P0C2W7 299 aaPredicted RBP25.41■■□□□ 1.66
TRIM39-210ENST00000440271 PRKAR2AP13861 404 aaKnown RBP25.41■■□□□ 1.66
TRIM39-210ENST00000440271 ARID4AP29374 1257 aaPredicted RBP25.41■■□□□ 1.66
TRIM39-210ENST00000440271 HOXA7P31268 230 aaPredicted RBP25.41■■□□□ 1.66
TRIM39-210ENST00000440271 MTX1Q13505 466 aa25.41■■□□□ 1.66
TRIM39-210ENST00000440271 Q7L0L9 218 aa25.41■■□□□ 1.66
TRIM39-210ENST00000440271 GPRC5AQ8NFJ5 357 aa25.41■■□□□ 1.66
TRIM39-210ENST00000440271 SH3RF3Q8TEJ3 882 aaPredicted RBP25.41■■□□□ 1.66
TRIM39-210ENST00000440271 NUDT12Q9BQG2 462 aa25.41■■□□□ 1.66
TRIM39-210ENST00000440271 TMOD4Q9NZQ9 345 aa25.41■■□□□ 1.66
TRIM39-210ENST00000440271 ATAD5Q96QE3 1844 aa25.4■■□□□ 1.66
TRIM39-210ENST00000440271 GNAI3P08754 354 aa25.4■■□□□ 1.66
TRIM39-210ENST00000440271 XRCC5P13010 732 aaKnown RBP25.4■■□□□ 1.66
TRIM39-210ENST00000440271 TDHQ8IZJ6 230 aa25.4■■□□□ 1.66
TRIM39-210ENST00000440271 DHX36Q9H2U1 1008 aaKnown RBP25.4■■□□□ 1.66
TRIM39-210ENST00000440271 TXNRD2Q9NNW7 524 aa25.4■■□□□ 1.66
TRIM39-210ENST00000440271 LRP2BPQ9P2M1 347 aa25.4■■□□□ 1.66
TRIM39-210ENST00000440271 DDX60LQ5H9U9 1706 aaKnown RBP25.4■■□□□ 1.66
TRIM39-210ENST00000440271 PLXNB2O15031 1838 aa25.4■■□□□ 1.66
TRIM39-210ENST00000440271 ASNSP08243 561 aa25.39■■□□□ 1.66
TRIM39-210ENST00000440271 JAG1P78504 1218 aa25.39■■□□□ 1.66
TRIM39-210ENST00000440271 SOCS4Q8WXH5 440 aa25.39■■□□□ 1.66
TRIM39-210ENST00000440271 NOL10Q9BSC4 688 aaKnown RBP25.39■■□□□ 1.66
TRIM39-210ENST00000440271 PFASO15067 1338 aa25.38■■□□□ 1.65
TRIM39-210ENST00000440271 C19orf81C9J6K1 198 aa25.38■■□□□ 1.65
TRIM39-210ENST00000440271 MCAMP43121 646 aa25.38■■□□□ 1.65
TRIM39-210ENST00000440271 HERVK_113P62684 666 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms