RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 VPS54Q9P1Q0 977 aa12.73□□□□□ -0.37
STRC-203ENST00000440125 CTDP1Q9Y5B0 961 aaPredicted RBP12.73□□□□□ -0.37
STRC-203ENST00000440125 USP27XA6NNY8 438 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 SEC31AO94979 1220 aaKnown RBP12.72□□□□□ -0.37
STRC-203ENST00000440125 SLC39A14Q15043 492 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 TCERG1LQ5VWI1 586 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 OSBP2Q969R2 916 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
STRC-203ENST00000440125 JAG2Q9Y219 1238 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 NIP7Q9Y221 180 aaKnown RBP eCLIP12.72□□□□□ -0.37
STRC-203ENST00000440125 RTL9Q8NET4 1388 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
STRC-203ENST00000440125 PI16Q6UXB8 463 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 PIK3AP1Q6ZUJ8 805 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 GPIHBP1Q8IV16 184 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 ANKRD18AQ8IVF6 992 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 NOSTRINQ8IVI9 506 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 ARID5AQ03989 594 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 NBPF11Q86T75 865 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
STRC-203ENST00000440125 GPR161Q8N6U8 529 aaKnown RBP12.72□□□□□ -0.37
STRC-203ENST00000440125 NAA15Q9BXJ9 866 aaKnown RBP12.72□□□□□ -0.37
STRC-203ENST00000440125 PIK3C2BO00750 1634 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 CRB1P82279 1406 aa12.72□□□□□ -0.37
STRC-203ENST00000440125 DTHD1Q6ZMT9 781 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 BLZF1Q9H2G9 400 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.37
STRC-203ENST00000440125 M0R2C6 588 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 HSF2BPO75031 334 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 TBC1D8BQ0IIM8 1120 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 PLA2G4DQ86XP0 818 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 GDAP1L1Q96MZ0 367 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 GOLPH3LQ9H4A5 285 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.37
STRC-203ENST00000440125 EFCAB8A8MWE9 144 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 CALML3P27482 149 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 SPTY2D1Q68D10 685 aaPredicted RBP12.71□□□□□ -0.38
STRC-203ENST00000440125 CCDC113Q9H0I3 377 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 CALM1P0DP23 149 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 CALM2P0DP24 149 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 CALM3P0DP25 149 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 ZNF76P36508 570 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 TUBB4BP68371 445 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 IFFO1Q0D2I5 559 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 PUM3Q15397 648 aaKnown RBP12.71□□□□□ -0.38
STRC-203ENST00000440125 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 RASSF4Q9H2L5 321 aa12.71□□□□□ -0.38
STRC-203ENST00000440125 TSPY3P0CV98 308 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 TSPY8P0CW00 308 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 KIF23Q02241 960 aaPredicted RBP12.7□□□□□ -0.38
STRC-203ENST00000440125 TCIRG1Q13488 830 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 TTC38Q5R3I4 469 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 AKNAD1Q5T1N1 836 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 RABEP2Q9H5N1 569 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 ZMYM6O95789 1325 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 CHGBP05060 677 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 MCM9Q9NXL9 1143 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 VGLL3A8MV65 326 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 TUBBP07437 444 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 PDE6AP16499 860 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 NAPAP54920 295 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 CYP26C1Q6V0L0 522 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 TMTC1Q8IUR5 882 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 MICALL1Q8N3F8 863 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 TAF6LQ9Y6J9 622 aa12.7□□□□□ -0.38
STRC-203ENST00000440125 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 MNAT1P51948 309 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 PRPF4BQ13523 1007 aaKnown RBP12.69□□□□□ -0.38
STRC-203ENST00000440125 GOPCQ9HD26 462 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 COBLO75128 1261 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 CLCN6P51797 869 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 RBM5P52756 815 aaKnown RBP eCLIP12.69□□□□□ -0.38
STRC-203ENST00000440125 PAK1Q13153 545 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 ZSCAN26Q16670 478 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 APOA5Q6Q788 366 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 SARM1Q6SZW1 724 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 VPS36Q86VN1 386 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 GRAMD1CQ8IYS0 662 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 ZEB2O60315 1214 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 ZPR1O75312 459 aa12.69□□□□□ -0.38
STRC-203ENST00000440125 ERCC3P19447 782 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 DDB1Q16531 1140 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 ZNF654Q8IZM8 581 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 SPATA5Q8NB90 893 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 EBAG9O00559 213 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 IPO4Q8TEX9 1081 aaKnown RBP12.68□□□□□ -0.38
STRC-203ENST00000440125 ATRIPQ8WXE1 791 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 LPIN2Q92539 896 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 SPAG5Q96R06 1193 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
STRC-203ENST00000440125 DDX41Q9UJV9 622 aaKnown RBP12.68□□□□□ -0.38
STRC-203ENST00000440125 IKBKBO14920 756 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 BAG3O95817 575 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
STRC-203ENST00000440125 GNAQP50148 359 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms