RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 SMIM22K7EJ46 135 aa13.99□□□□□ -0.17
HDAC8-214ENST00000439122 RESP18Q5W5W9 173 aa13.99□□□□□ -0.17
HDAC8-214ENST00000439122 CRACR2BQ8N4Y2 399 aaPredicted RBP13.99□□□□□ -0.17
HDAC8-214ENST00000439122 CELF1Q92879 486 aaKnown RBP13.99□□□□□ -0.17
HDAC8-214ENST00000439122 NID2Q14112 1375 aa13.99□□□□□ -0.17
HDAC8-214ENST00000439122 NEMFO60524 1076 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 TNKSO95271 1327 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 DEXIO95424 95 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 COL1A1P02452 1464 aaPredicted RBP13.98□□□□□ -0.17
HDAC8-214ENST00000439122 TPM4P67936 248 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 NBPF11Q86T75 865 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 RIOK1Q9BRS2 568 aaKnown RBP13.98□□□□□ -0.17
HDAC8-214ENST00000439122 MTA3Q9BTC8 594 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 CUTAO60888 179 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 SMC2O95347 1197 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 GTF2F1P35269 517 aaKnown RBP eCLIP13.98□□□□□ -0.17
HDAC8-214ENST00000439122 DYNLL1P63167 89 aaKnown RBP13.98□□□□□ -0.17
HDAC8-214ENST00000439122 PIP4K2BP78356 416 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 PNOCQ13519 176 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 TPD52L1Q16890 204 aaPredicted RBP13.98□□□□□ -0.17
HDAC8-214ENST00000439122 TBC1D9BQ66K14 1250 aa13.98□□□□□ -0.17
HDAC8-214ENST00000439122 KRI1Q8N9T8 703 aaKnown RBP13.98□□□□□ -0.17
HDAC8-214ENST00000439122 FAM84BQ96KN1 310 aaPredicted RBP13.98□□□□□ -0.17
HDAC8-214ENST00000439122 CYP2D7A0A087X1C5 515 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 SMTNL1A8MU46 457 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 SKILP12757 684 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 SPECC1Q5M775 1068 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 MAP7D2Q96T17 732 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 ANAPC4Q9UJX5 808 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 KCNH3Q9ULD8 1083 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 COL5A3P25940 1745 aaPredicted RBP13.97□□□□□ -0.17
HDAC8-214ENST00000439122 CICQ96RK0 1608 aaPredicted RBP13.97□□□□□ -0.17
HDAC8-214ENST00000439122 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
HDAC8-214ENST00000439122 TOB1P50616 345 aaPredicted RBP13.97□□□□□ -0.17
HDAC8-214ENST00000439122 NR5A1Q13285 461 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 LONRF3Q496Y0 759 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 CNNM3Q8NE01 707 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 FOXP1Q9H334 677 aaPredicted RBP13.97□□□□□ -0.17
HDAC8-214ENST00000439122 IFNKQ9P0W0 207 aa13.97□□□□□ -0.17
HDAC8-214ENST00000439122 FAM237AA0A1B0GTK4 181 aa13.96□□□□□ -0.17
HDAC8-214ENST00000439122 PRDM1O75626 825 aa13.96□□□□□ -0.17
HDAC8-214ENST00000439122 TNNT1P13805 278 aa13.96□□□□□ -0.17
HDAC8-214ENST00000439122 RCAN1P53805 252 aa13.96□□□□□ -0.17
HDAC8-214ENST00000439122 AKAP17AQ02040 695 aaKnown RBP13.96□□□□□ -0.17
HDAC8-214ENST00000439122 RILPL1Q5EBL4 403 aa13.96□□□□□ -0.17
HDAC8-214ENST00000439122 XPO4Q9C0E2 1151 aaKnown RBP13.96□□□□□ -0.17
HDAC8-214ENST00000439122 TUBE1Q9UJT0 475 aa13.96□□□□□ -0.17
HDAC8-214ENST00000439122 ATP2B1P20020 1258 aa13.96□□□□□ -0.18
HDAC8-214ENST00000439122 KLRK1P26718 216 aa13.96□□□□□ -0.18
HDAC8-214ENST00000439122 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.18
HDAC8-214ENST00000439122 NCAPHQ15003 741 aa13.96□□□□□ -0.18
HDAC8-214ENST00000439122 SEC23AQ15436 765 aa13.96□□□□□ -0.18
HDAC8-214ENST00000439122 ENAHQ8N8S7 591 aaPredicted RBP13.96□□□□□ -0.18
HDAC8-214ENST00000439122 ZSCAN10Q96SZ4 725 aaPredicted RBP13.96□□□□□ -0.18
HDAC8-214ENST00000439122 BAZ2AQ9UIF9 1905 aaKnown RBP13.95□□□□□ -0.18
HDAC8-214ENST00000439122 GSDMDP57764 484 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 RPS8P62241 208 aaKnown RBP13.95□□□□□ -0.18
HDAC8-214ENST00000439122 IFIT1BQ5T764 474 aaKnown RBP13.95□□□□□ -0.18
HDAC8-214ENST00000439122 KRBA2Q6ZNG9 492 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 PTF1AQ7RTS3 328 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 METTL16Q86W50 562 aaKnown RBP13.95□□□□□ -0.18
HDAC8-214ENST00000439122 NBPF5PQ86XG9 351 aaPredicted RBP13.95□□□□□ -0.18
HDAC8-214ENST00000439122 ZNF384Q8TF68 577 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 NLRP3Q96P20 1036 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 SETDB2Q96T68 719 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 BRIP1Q9BX63 1249 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 CACNA1SQ13698 1873 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 MYH2Q9UKX2 1941 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 MTERF4Q7Z6M4 381 aaKnown RBP13.95□□□□□ -0.18
HDAC8-214ENST00000439122 CATIPQ7Z7H3 387 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 IQCA1Q86XH1 822 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 CCDC24Q8N4L8 307 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 BCL2L12Q9HB09 334 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 TFCP2L1Q9NZI6 479 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 SRP68Q9UHB9 627 aaKnown RBP13.95□□□□□ -0.18
HDAC8-214ENST00000439122 PCDHB6Q9Y5E3 794 aa13.95□□□□□ -0.18
HDAC8-214ENST00000439122 CNTNAP4Q9C0A0 1308 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 IKBKBO14920 756 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 CCZ1BP86790 482 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 CCZ1P86791 482 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-214ENST00000439122 GRIN1Q05586 938 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 TMC6Q7Z403 805 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 FBXO33Q7Z6M2 555 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 RNF26Q9BY78 433 aaPredicted RBP13.94□□□□□ -0.18
HDAC8-214ENST00000439122 NYXQ9GZU5 481 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 CABP5Q9NP86 173 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 IMPACTQ9P2X3 320 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 A0A1B0GUL6 1792 aa13.94□□□□□ -0.18
HDAC8-214ENST00000439122 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 USP17L21D6R901 530 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 ZPR1O75312 459 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 XBP1P17861 261 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 MECOMQ03112 1051 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 PPP2R5BQ15173 497 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 NSUN4Q96CB9 384 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms