RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ZNF589Q86UQ0 364 aaPredicted RBP19.38■□□□□ 0.69
SNRPB-202ENST00000438552 RASAL3Q86YV0 1011 aa19.38■□□□□ 0.69
SNRPB-202ENST00000438552 ANKRD13AQ8IZ07 590 aa19.38■□□□□ 0.69
SNRPB-202ENST00000438552 DNAJC18Q9H819 358 aa19.38■□□□□ 0.69
SNRPB-202ENST00000438552 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.38■□□□□ 0.69
SNRPB-202ENST00000438552 PI4KBQ9UBF8 816 aa19.38■□□□□ 0.69
SNRPB-202ENST00000438552 HIP1O00291 1037 aa19.37■□□□□ 0.69
SNRPB-202ENST00000438552 POLR3DP05423 398 aaPredicted RBP19.37■□□□□ 0.69
SNRPB-202ENST00000438552 SLC10A3P09131 477 aa19.37■□□□□ 0.69
SNRPB-202ENST00000438552 GNAT2P19087 354 aa19.37■□□□□ 0.69
SNRPB-202ENST00000438552 MCMDC2Q4G0Z9 681 aa19.37■□□□□ 0.69
SNRPB-202ENST00000438552 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
SNRPB-202ENST00000438552 DNAJC5GQ8N7S2 189 aa19.37■□□□□ 0.69
SNRPB-202ENST00000438552 ZKSCAN4Q969J2 545 aaPredicted RBP19.37■□□□□ 0.69
SNRPB-202ENST00000438552 ELP3Q9H9T3 547 aa19.37■□□□□ 0.69
SNRPB-202ENST00000438552 LAMA4Q16363 1823 aa19.37■□□□□ 0.69
SNRPB-202ENST00000438552 PHIPQ8WWQ0 1821 aa19.37■□□□□ 0.69
SNRPB-202ENST00000438552 CCDC171Q6TFL3 1326 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 WDR33Q9C0J8 1336 aaKnown RBP19.36■□□□□ 0.69
SNRPB-202ENST00000438552 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 FOXP2O15409 715 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 PLCD1P51178 756 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 MAP3K9P80192 1104 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 MAP3K10Q02779 954 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 CRACR2BQ8N4Y2 399 aaPredicted RBP19.36■□□□□ 0.69
SNRPB-202ENST00000438552 DDRGK1Q96HY6 314 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 TRIM34Q9BYJ4 488 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 HERC5Q9UII4 1024 aaKnown RBP19.36■□□□□ 0.69
SNRPB-202ENST00000438552 ZNF112Q9UJU3 913 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 CSADQ9Y600 493 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 SNCAIPQ9Y6H5 919 aa19.36■□□□□ 0.69
SNRPB-202ENST00000438552 PHF20L1A8MW92 1017 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 FAM155AB1AL88 458 aaPredicted RBP19.35■□□□□ 0.69
SNRPB-202ENST00000438552 SMIM22K7EJ46 135 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 TBC1D12O60347 775 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 APPP05067 770 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 ECE1P42892 770 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 TDO2P48775 406 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 BMP2KLQ5H9B9 411 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 VPS53Q5VIR6 699 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 TTC6Q86TZ1 520 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 EHD4Q9H223 541 aa19.35■□□□□ 0.69
SNRPB-202ENST00000438552 USP17L12C9JPN9 530 aa19.34■□□□□ 0.69
SNRPB-202ENST00000438552 USP17L21D6R901 530 aa19.34■□□□□ 0.69
SNRPB-202ENST00000438552 AOC2O75106 756 aa19.34■□□□□ 0.69
SNRPB-202ENST00000438552 MKRN3Q13064 507 aaKnown RBP19.34■□□□□ 0.69
SNRPB-202ENST00000438552 CTR9Q6PD62 1173 aa19.34■□□□□ 0.69
SNRPB-202ENST00000438552 METTL16Q86W50 562 aaKnown RBP19.34■□□□□ 0.69
SNRPB-202ENST00000438552 CNKSR2Q8WXI2 1034 aa19.34■□□□□ 0.69
SNRPB-202ENST00000438552 SLC10A4Q96EP9 437 aa19.34■□□□□ 0.69
SNRPB-202ENST00000438552 IL25Q9H293 177 aa19.34■□□□□ 0.69
SNRPB-202ENST00000438552 ARPP21Q9UBL0 812 aaPredicted RBP19.34■□□□□ 0.69
SNRPB-202ENST00000438552 SERPINB13Q9UIV8 391 aa19.34■□□□□ 0.69
SNRPB-202ENST00000438552 UNCXA6NJT0 531 aa19.33■□□□□ 0.68
SNRPB-202ENST00000438552 PATL2C9JE40 543 aaKnown RBP19.33■□□□□ 0.68
SNRPB-202ENST00000438552 CHMLP26374 656 aa19.33■□□□□ 0.68
SNRPB-202ENST00000438552 RRP1BQ14684 758 aaKnown RBP19.33■□□□□ 0.68
SNRPB-202ENST00000438552 NOL9Q5SY16 702 aaKnown RBP19.33■□□□□ 0.68
SNRPB-202ENST00000438552 GIMAP6Q6P9H5 292 aa19.33■□□□□ 0.68
SNRPB-202ENST00000438552 AMOTL1Q8IY63 956 aa19.33■□□□□ 0.68
SNRPB-202ENST00000438552 IFNL3Q8IZI9 196 aa19.33■□□□□ 0.68
SNRPB-202ENST00000438552 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.33■□□□□ 0.68
SNRPB-202ENST00000438552 PTPRFP10586 1907 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 CAPN15O75808 1086 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 GJA5P36382 358 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 C12orf60Q5U649 245 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 FOXP4Q8IVH2 680 aaPredicted RBP19.32■□□□□ 0.68
SNRPB-202ENST00000438552 SLC44A5Q8NCS7 719 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 CCDC102AQ96A19 550 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 OPTNQ96CV9 577 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 DYNLL2Q96FJ2 89 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 WNK4Q96J92 1243 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 NACAP1Q9BZK3 213 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 NAPBQ9H115 298 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
SNRPB-202ENST00000438552 RAD50Q92878 1312 aa19.31■□□□□ 0.68
SNRPB-202ENST00000438552 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
SNRPB-202ENST00000438552 GABPAQ06546 454 aa19.31■□□□□ 0.68
SNRPB-202ENST00000438552 SHROOM1Q2M3G4 852 aaPredicted RBP19.31■□□□□ 0.68
SNRPB-202ENST00000438552 SPRYD7Q5W111 196 aa19.31■□□□□ 0.68
SNRPB-202ENST00000438552 SCYL3Q8IZE3 742 aa19.31■□□□□ 0.68
SNRPB-202ENST00000438552 OTUD5Q96G74 571 aa19.31■□□□□ 0.68
SNRPB-202ENST00000438552 ZIC5Q96T25 663 aa19.31■□□□□ 0.68
SNRPB-202ENST00000438552 SPDYE5A6NIY4 337 aa19.3■□□□□ 0.68
SNRPB-202ENST00000438552 MINDY4BA8MYZ0 360 aa19.3■□□□□ 0.68
SNRPB-202ENST00000438552 CTNND1O60716 968 aaKnown RBP19.3■□□□□ 0.68
SNRPB-202ENST00000438552 GDF11O95390 407 aa19.3■□□□□ 0.68
SNRPB-202ENST00000438552 HSPD1P10809 573 aaKnown RBP19.3■□□□□ 0.68
SNRPB-202ENST00000438552 SHMT1P34896 483 aa19.3■□□□□ 0.68
SNRPB-202ENST00000438552 NOGQ13253 232 aa19.3■□□□□ 0.68
SNRPB-202ENST00000438552 SBK1Q52WX2 424 aa19.3■□□□□ 0.68
SNRPB-202ENST00000438552 CAP2P40123 477 aa19.29■□□□□ 0.68
SNRPB-202ENST00000438552 JAG1P78504 1218 aa19.29■□□□□ 0.68
SNRPB-202ENST00000438552 CCDC84Q86UT8 332 aaPredicted RBP19.29■□□□□ 0.68
SNRPB-202ENST00000438552 STK11IPQ8N1F8 1099 aa19.29■□□□□ 0.68
SNRPB-202ENST00000438552 RUFY2Q8WXA3 655 aa19.29■□□□□ 0.68
SNRPB-202ENST00000438552 PICK1Q9NRD5 415 aa19.29■□□□□ 0.68
SNRPB-202ENST00000438552 PCNTO95613 3336 aa19.29■□□□□ 0.68
SNRPB-202ENST00000438552 GREB1LQ9C091 1923 aaPredicted RBP19.28■□□□□ 0.68
SNRPB-202ENST00000438552 ZBTB48P10074 688 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms