RNA–Protein interactions for RNA: ENST00000437597.1

LINC00884-201, long intergenic non-protein coding RNA 884, humanhuman

TSL 3

Gene LINC00884, Length 419 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00884-201ENST00000437597 MAP3K10Q02779 954 aa12.58□□□□□ -0.4
LINC00884-201ENST00000437597 EPHA10Q5JZY3 1008 aa12.58□□□□□ -0.4
LINC00884-201ENST00000437597 IL27Q8NEV9 243 aa12.58□□□□□ -0.4
LINC00884-201ENST00000437597 TRIM43Q96BQ3 446 aaPredicted RBP12.58□□□□□ -0.4
LINC00884-201ENST00000437597 ASCC2Q9H1I8 757 aaPredicted RBP12.58□□□□□ -0.4
LINC00884-201ENST00000437597 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
LINC00884-201ENST00000437597 CTNND1O60716 968 aaKnown RBP12.57□□□□□ -0.4
LINC00884-201ENST00000437597 ITGB8P26012 769 aa12.57□□□□□ -0.4
LINC00884-201ENST00000437597 ADGRE1Q14246 886 aa12.57□□□□□ -0.4
LINC00884-201ENST00000437597 SNX17Q15036 470 aa12.57□□□□□ -0.4
LINC00884-201ENST00000437597 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
LINC00884-201ENST00000437597 SH3BP5LQ7L8J4 393 aa12.57□□□□□ -0.4
LINC00884-201ENST00000437597 TIFAQ96CG3 184 aa12.57□□□□□ -0.4
LINC00884-201ENST00000437597 GAS2L1Q99501 681 aaPredicted RBP12.57□□□□□ -0.4
LINC00884-201ENST00000437597 C11orf16Q9NQ32 467 aa12.57□□□□□ -0.4
LINC00884-201ENST00000437597 IFT57Q9NWB7 429 aa12.57□□□□□ -0.4
LINC00884-201ENST00000437597 LRRFIP2Q9Y608 721 aaKnown RBP12.57□□□□□ -0.4
LINC00884-201ENST00000437597 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 DIXDC1Q155Q3 683 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 TRIM60Q495X7 471 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 TMEM31Q5JXX7 168 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 MORN1Q5T089 497 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 SLC39A5Q6ZMH5 540 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 VPS37DQ86XT2 251 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 TSPYL6Q8N831 410 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 LPAR1Q92633 364 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 APBA2Q99767 749 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 PUS3Q9BZE2 481 aaKnown RBP12.56□□□□□ -0.4
LINC00884-201ENST00000437597 PRDM12Q9H4Q4 367 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 TXNRD2Q9NNW7 524 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 DDX20Q9UHI6 824 aaKnown RBP12.56□□□□□ -0.4
LINC00884-201ENST00000437597 CHD7Q9P2D1 2997 aa12.56□□□□□ -0.4
LINC00884-201ENST00000437597 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.55□□□□□ -0.4
LINC00884-201ENST00000437597 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.55□□□□□ -0.4
LINC00884-201ENST00000437597 FRAT2O75474 233 aaPredicted RBP12.55□□□□□ -0.4
LINC00884-201ENST00000437597 ZEB1P37275 1124 aaPredicted RBP12.55□□□□□ -0.4
LINC00884-201ENST00000437597 RGS2P41220 211 aa12.55□□□□□ -0.4
LINC00884-201ENST00000437597 MRE11P49959 708 aa12.55□□□□□ -0.4
LINC00884-201ENST00000437597 PABPC4Q13310 644 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00884-201ENST00000437597 CCDC85BQ15834 202 aaPredicted RBP12.55□□□□□ -0.4
LINC00884-201ENST00000437597 TAF7LQ5H9L4 462 aa12.55□□□□□ -0.4
LINC00884-201ENST00000437597 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
LINC00884-201ENST00000437597 CXXC1Q9P0U4 656 aaPredicted RBP12.55□□□□□ -0.4
LINC00884-201ENST00000437597 PLXNA1Q9UIW2 1896 aa12.55□□□□□ -0.4
LINC00884-201ENST00000437597 MYH13Q9UKX3 1938 aa12.54□□□□□ -0.4
LINC00884-201ENST00000437597 ATAD5Q96QE3 1844 aa12.54□□□□□ -0.4
LINC00884-201ENST00000437597 RGS3P49796 1198 aa12.54□□□□□ -0.4
LINC00884-201ENST00000437597 HMGCS2P54868 508 aa12.54□□□□□ -0.4
LINC00884-201ENST00000437597 GNAI1P63096 354 aa12.54□□□□□ -0.4
LINC00884-201ENST00000437597 SPP2Q13103 211 aa12.54□□□□□ -0.4
LINC00884-201ENST00000437597 P2RX7Q99572 595 aaKnown RBP12.54□□□□□ -0.4
LINC00884-201ENST00000437597 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
LINC00884-201ENST00000437597 USP40Q9NVE5 1235 aa12.54□□□□□ -0.4
LINC00884-201ENST00000437597 FLRT1Q9NZU1 646 aa12.54□□□□□ -0.4
LINC00884-201ENST00000437597 DDTLA6NHG4 134 aaPredicted RBP12.53□□□□□ -0.4
LINC00884-201ENST00000437597 MSCO60682 206 aa12.53□□□□□ -0.4
LINC00884-201ENST00000437597 GPR37L1O60883 481 aa12.53□□□□□ -0.4
LINC00884-201ENST00000437597 ENTPD3O75355 529 aa12.53□□□□□ -0.4
LINC00884-201ENST00000437597 MAPK4P31152 587 aa12.53□□□□□ -0.4
LINC00884-201ENST00000437597 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
LINC00884-201ENST00000437597 GJC2Q5T442 439 aaPredicted RBP12.53□□□□□ -0.4
LINC00884-201ENST00000437597 GPR142Q7Z601 462 aa12.53□□□□□ -0.4
LINC00884-201ENST00000437597 DNAAF4Q8WXU2 420 aa12.53□□□□□ -0.4
LINC00884-201ENST00000437597 IDI2Q9BXS1 227 aa12.53□□□□□ -0.4
LINC00884-201ENST00000437597 PORCNQ9H237 461 aa12.53□□□□□ -0.4
LINC00884-201ENST00000437597 PBX2P40425 430 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 KCNQ1P51787 676 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 TFF2Q03403 129 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 CAVIN4Q5BKX8 364 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 C1orf53Q5VUE5 145 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 ZNF280CQ8ND82 737 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 TRPV1Q8NER1 839 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 GPRC5AQ8NFJ5 357 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 KHSRPQ92945 711 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC00884-201ENST00000437597 STK31Q9BXU1 1019 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 RBPJLQ9UBG7 517 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 UTYO14607 1347 aa12.52□□□□□ -0.41
LINC00884-201ENST00000437597 FAM86C2PA6NEL3 165 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 PRDX5P30044 214 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 HERVK_113P62684 666 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 Q3C1V9 767 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 MFSD14CQ5VZR4 134 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 VGLL2Q8N8G2 317 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 PBX4Q9BYU1 374 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 MROH5Q6ZUA9 1318 aa12.51□□□□□ -0.41
LINC00884-201ENST00000437597 IGHA2P01877 340 aa12.5□□□□□ -0.41
LINC00884-201ENST00000437597 SLC4A2P04920 1241 aa12.5□□□□□ -0.41
LINC00884-201ENST00000437597 CNGA1P29973 690 aa12.5□□□□□ -0.41
LINC00884-201ENST00000437597 ERVK-9P63128 1117 aa12.5□□□□□ -0.41
LINC00884-201ENST00000437597 ERVK-24P63145 666 aa12.5□□□□□ -0.41
LINC00884-201ENST00000437597 IRX3P78415 501 aaPredicted RBP12.5□□□□□ -0.41
LINC00884-201ENST00000437597 TLE2Q04725 743 aa12.5□□□□□ -0.41
LINC00884-201ENST00000437597 FPGSQ05932 587 aa12.5□□□□□ -0.41
LINC00884-201ENST00000437597 FLIIQ13045 1269 aa12.5□□□□□ -0.41
LINC00884-201ENST00000437597 ZSCAN29Q8IWY8 852 aaPredicted RBP12.5□□□□□ -0.41
LINC00884-201ENST00000437597 DDX4Q9NQI0 724 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms