RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 NOL10Q9BSC4 688 aaKnown RBP26.75■■□□□ 1.87
RPUSD3-206ENST00000433535 TMEM106CQ9BVX2 250 aa26.75■■□□□ 1.87
RPUSD3-206ENST00000433535 ZAP70P43403 619 aa26.74■■□□□ 1.87
RPUSD3-206ENST00000433535 CCDC8Q9H0W5 538 aaPredicted RBP26.74■■□□□ 1.87
RPUSD3-206ENST00000433535 MGAMO43451 1857 aa26.74■■□□□ 1.87
RPUSD3-206ENST00000433535 FOCADQ5VW36 1801 aa26.74■■□□□ 1.87
RPUSD3-206ENST00000433535 FMNL1O95466 1100 aaPredicted RBP26.73■■□□□ 1.87
RPUSD3-206ENST00000433535 BCRP11274 1271 aa26.73■■□□□ 1.87
RPUSD3-206ENST00000433535 OSBPP22059 807 aa26.73■■□□□ 1.87
RPUSD3-206ENST00000433535 EAF2Q96CJ1 260 aaPredicted RBP26.73■■□□□ 1.87
RPUSD3-206ENST00000433535 ZNF512BQ96KM6 892 aaPredicted RBP26.73■■□□□ 1.87
RPUSD3-206ENST00000433535 PIH1D3Q9NQM4 214 aaKnown RBP26.73■■□□□ 1.87
RPUSD3-206ENST00000433535 SRRDQ9UH36 339 aa26.73■■□□□ 1.87
RPUSD3-206ENST00000433535 RRP1BQ14684 758 aaKnown RBP26.72■■□□□ 1.87
RPUSD3-206ENST00000433535 SLC4A8Q2Y0W8 1093 aa26.72■■□□□ 1.87
RPUSD3-206ENST00000433535 LOC285556D6RIA3 1793 aa26.71■■□□□ 1.87
RPUSD3-206ENST00000433535 MYPNQ86TC9 1320 aa26.71■■□□□ 1.87
RPUSD3-206ENST00000433535 BAG3O95817 575 aa26.71■■□□□ 1.87
RPUSD3-206ENST00000433535 PRMT2P55345 433 aa26.71■■□□□ 1.87
RPUSD3-206ENST00000433535 EXOC6BQ9Y2D4 811 aa26.71■■□□□ 1.87
RPUSD3-206ENST00000433535 BRCA2P51587 3418 aa26.71■■□□□ 1.87
RPUSD3-206ENST00000433535 MAPKAPK5Q8IW41 473 aa26.7■■□□□ 1.86
RPUSD3-206ENST00000433535 TGFBRAP1Q8WUH2 860 aa26.7■■□□□ 1.86
RPUSD3-206ENST00000433535 FLT1P17948 1338 aa26.69■■□□□ 1.86
RPUSD3-206ENST00000433535 PLCG2P16885 1265 aa26.69■■□□□ 1.86
RPUSD3-206ENST00000433535 TREML2Q5T2D2 321 aa26.69■■□□□ 1.86
RPUSD3-206ENST00000433535 AGTPBP1Q9UPW5 1226 aa26.69■■□□□ 1.86
RPUSD3-206ENST00000433535 SLC45A1Q9Y2W3 748 aa26.69■■□□□ 1.86
RPUSD3-206ENST00000433535 NDUFB9Q9Y6M9 179 aa26.69■■□□□ 1.86
RPUSD3-206ENST00000433535 HOXD10P28358 340 aa26.68■■□□□ 1.86
RPUSD3-206ENST00000433535 CAP2P40123 477 aa26.68■■□□□ 1.86
RPUSD3-206ENST00000433535 FCGRTP55899 365 aa26.68■■□□□ 1.86
RPUSD3-206ENST00000433535 PPP4CP60510 307 aa26.68■■□□□ 1.86
RPUSD3-206ENST00000433535 PRKCZQ05513 592 aa26.68■■□□□ 1.86
RPUSD3-206ENST00000433535 RAET1EQ8TD07 263 aa26.68■■□□□ 1.86
RPUSD3-206ENST00000433535 SMCR8Q8TEV9 937 aaPredicted RBP26.68■■□□□ 1.86
RPUSD3-206ENST00000433535 HERC5Q9UII4 1024 aaKnown RBP26.68■■□□□ 1.86
RPUSD3-206ENST00000433535 SPP2Q13103 211 aa26.67■■□□□ 1.86
RPUSD3-206ENST00000433535 PI4KBQ9UBF8 816 aa26.67■■□□□ 1.86
RPUSD3-206ENST00000433535 IDH1O75874 414 aaKnown RBP26.66■■□□□ 1.86
RPUSD3-206ENST00000433535 DYNLL1P63167 89 aaKnown RBP26.66■■□□□ 1.86
RPUSD3-206ENST00000433535 MTFR1Q15390 333 aa26.66■■□□□ 1.86
RPUSD3-206ENST00000433535 AACSQ86V21 672 aa26.66■■□□□ 1.86
RPUSD3-206ENST00000433535 ZNF280CQ8ND82 737 aa26.66■■□□□ 1.86
RPUSD3-206ENST00000433535 DHX36Q9H2U1 1008 aaKnown RBP26.66■■□□□ 1.86
RPUSD3-206ENST00000433535 DNAJC18Q9H819 358 aa26.66■■□□□ 1.86
RPUSD3-206ENST00000433535 MKI67P46013 3256 aaKnown RBP26.65■■□□□ 1.86
RPUSD3-206ENST00000433535 CYP7A1P22680 504 aa26.65■■□□□ 1.86
RPUSD3-206ENST00000433535 GRK4P32298 578 aa26.65■■□□□ 1.86
RPUSD3-206ENST00000433535 HMGCS2P54868 508 aa26.65■■□□□ 1.86
RPUSD3-206ENST00000433535 SAP30BPQ9UHR5 308 aaKnown RBP26.65■■□□□ 1.86
RPUSD3-206ENST00000433535 PALD1Q9ULE6 856 aa26.65■■□□□ 1.86
RPUSD3-206ENST00000433535 GABRQQ9UN88 632 aa26.65■■□□□ 1.86
RPUSD3-206ENST00000433535 ERC1Q8IUD2 1116 aa26.64■■□□□ 1.86
RPUSD3-206ENST00000433535 MIGA1Q8NAN2 632 aa26.64■■□□□ 1.86
RPUSD3-206ENST00000433535 PROCA1Q8NCQ7 364 aaPredicted RBP26.64■■□□□ 1.86
RPUSD3-206ENST00000433535 ANTXR1Q9H6X2 564 aa26.64■■□□□ 1.86
RPUSD3-206ENST00000433535 IL1RAPL2Q9NP60 686 aa26.64■■□□□ 1.86
RPUSD3-206ENST00000433535 USP17L5A8MUK1 530 aa26.63■■□□□ 1.85
RPUSD3-206ENST00000433535 SHROOM1Q2M3G4 852 aaPredicted RBP26.63■■□□□ 1.85
RPUSD3-206ENST00000433535 ANKRD13CQ8N6S4 541 aa26.63■■□□□ 1.85
RPUSD3-206ENST00000433535 JAG1P78504 1218 aa26.62■■□□□ 1.85
RPUSD3-206ENST00000433535 CRACR2BQ8N4Y2 399 aaPredicted RBP26.62■■□□□ 1.85
RPUSD3-206ENST00000433535 MAGEB6Q8N7X4 407 aa26.62■■□□□ 1.85
RPUSD3-206ENST00000433535 TBC1D2Q9BYX2 928 aa26.62■■□□□ 1.85
RPUSD3-206ENST00000433535 PNMA3Q9UL41 463 aa26.62■■□□□ 1.85
RPUSD3-206ENST00000433535 MYH1P12882 1939 aa26.61■■□□□ 1.85
RPUSD3-206ENST00000433535 SHISA4Q96DD7 197 aa26.61■■□□□ 1.85
RPUSD3-206ENST00000433535 TRIM34Q9BYJ4 488 aa26.61■■□□□ 1.85
RPUSD3-206ENST00000433535 COG6Q9Y2V7 657 aa26.61■■□□□ 1.85
RPUSD3-206ENST00000433535 APBB1O00213 710 aa26.6■■□□□ 1.85
RPUSD3-206ENST00000433535 TNPO2O14787 897 aaKnown RBP26.6■■□□□ 1.85
RPUSD3-206ENST00000433535 IGSF3O75054 1194 aa26.6■■□□□ 1.85
RPUSD3-206ENST00000433535 GDF11O95390 407 aa26.6■■□□□ 1.85
RPUSD3-206ENST00000433535 MTMR2Q13614 643 aa26.6■■□□□ 1.85
RPUSD3-206ENST00000433535 RHPN1Q8TCX5 695 aa26.6■■□□□ 1.85
RPUSD3-206ENST00000433535 AS3MTQ9HBK9 375 aa26.6■■□□□ 1.85
RPUSD3-206ENST00000433535 BIN2Q9UBW5 565 aaPredicted RBP26.6■■□□□ 1.85
RPUSD3-206ENST00000433535 MS4A1P11836 297 aa26.59■■□□□ 1.85
RPUSD3-206ENST00000433535 FLT3LGP49771 235 aa26.59■■□□□ 1.85
RPUSD3-206ENST00000433535 METTL16Q86W50 562 aaKnown RBP26.59■■□□□ 1.85
RPUSD3-206ENST00000433535 ASNSP08243 561 aa26.58■■□□□ 1.85
RPUSD3-206ENST00000433535 CCL5P13501 91 aa26.58■■□□□ 1.85
RPUSD3-206ENST00000433535 FAM110CQ1W6H9 321 aa26.58■■□□□ 1.85
RPUSD3-206ENST00000433535 HSP90AB4PQ58FF6 505 aa26.58■■□□□ 1.85
RPUSD3-206ENST00000433535 SH3D19Q5HYK7 790 aa26.58■■□□□ 1.85
RPUSD3-206ENST00000433535 FOXP4Q8IVH2 680 aaPredicted RBP26.58■■□□□ 1.85
RPUSD3-206ENST00000433535 SLAIN1Q8ND83 568 aa26.58■■□□□ 1.85
RPUSD3-206ENST00000433535 BCL11AQ9H165 835 aa26.58■■□□□ 1.85
RPUSD3-206ENST00000433535 ASCC2Q9H1I8 757 aaPredicted RBP26.58■■□□□ 1.85
RPUSD3-206ENST00000433535 HLA-DOAP06340 250 aa26.57■■□□□ 1.84
RPUSD3-206ENST00000433535 ELNP15502 786 aa26.57■■□□□ 1.84
RPUSD3-206ENST00000433535 USP5P45974 858 aa26.57■■□□□ 1.84
RPUSD3-206ENST00000433535 MAP3K12Q12852 859 aa26.57■■□□□ 1.84
RPUSD3-206ENST00000433535 WDR18Q9BV38 432 aa26.57■■□□□ 1.84
RPUSD3-206ENST00000433535 ZBTB21Q9ULJ3 1066 aa26.57■■□□□ 1.84
RPUSD3-206ENST00000433535 DDX19BQ9UMR2 479 aa26.57■■□□□ 1.84
RPUSD3-206ENST00000433535 DDX60LQ5H9U9 1706 aaKnown RBP26.56■■□□□ 1.84
RPUSD3-206ENST00000433535 ADCY3O60266 1144 aa26.56■■□□□ 1.84
RPUSD3-206ENST00000433535 PABPC4Q13310 644 aaKnown RBP eCLIP26.56■■□□□ 1.842e-8■■■■■ 44.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms