RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 KRI1Q8N9T8 703 aaKnown RBP16.9■□□□□ 0.3
DDX56-205ENST00000433257 ENOX1Q8TC92 643 aaKnown RBP16.9■□□□□ 0.3
DDX56-205ENST00000433257 PPP2R2CQ9Y2T4 447 aa16.9■□□□□ 0.3
DDX56-205ENST00000433257 TAF1LQ8IZX4 1826 aa16.9■□□□□ 0.3
DDX56-205ENST00000433257 FKBP4Q02790 459 aaKnown RBP eCLIP16.89■□□□□ 0.29
DDX56-205ENST00000433257 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
DDX56-205ENST00000433257 BRD3Q15059 726 aa16.89■□□□□ 0.29
DDX56-205ENST00000433257 NT5DC1Q5TFE4 455 aa16.89■□□□□ 0.29
DDX56-205ENST00000433257 SPECC1LQ69YQ0 1117 aa16.89■□□□□ 0.29
DDX56-205ENST00000433257 KRT40Q6A162 431 aa16.89■□□□□ 0.29
DDX56-205ENST00000433257 SGMS1Q86VZ5 419 aa16.89■□□□□ 0.29
DDX56-205ENST00000433257 GOLGA1Q92805 767 aa16.89■□□□□ 0.29
DDX56-205ENST00000433257 FBXW7Q969H0 707 aa16.89■□□□□ 0.29
DDX56-205ENST00000433257 UTP14AQ9BVJ6 771 aaKnown RBP16.89■□□□□ 0.29
DDX56-205ENST00000433257 TBC1D2BQ9UPU7 963 aa16.89■□□□□ 0.29
DDX56-205ENST00000433257 PARP3Q9Y6F1 533 aa16.89■□□□□ 0.29
DDX56-205ENST00000433257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
DDX56-205ENST00000433257 SH2B2O14492 632 aaPredicted RBP16.88■□□□□ 0.29
DDX56-205ENST00000433257 A1BGP04217 495 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 ERCC5P28715 1186 aaPredicted RBP16.88■□□□□ 0.29
DDX56-205ENST00000433257 IARSP41252 1262 aaKnown RBP16.88■□□□□ 0.29
DDX56-205ENST00000433257 ANTXR2P58335 489 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 UBE3CQ15386 1083 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 ALX1Q15699 326 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 RILPL1Q5EBL4 403 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 HSD3B7Q9H2F3 369 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 ARFGAP3Q9NP61 516 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 CWC15Q9P013 229 aaKnown RBP16.88■□□□□ 0.29
DDX56-205ENST00000433257 KCNH3Q9ULD8 1083 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 MROH7-TTC4A0A0A0MT08 1334 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 PNPLA7Q6ZV29 1317 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 KIF28PB7ZC32 967 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 GPAA1O43292 621 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 WDHD1O75717 1129 aaPredicted RBP16.88■□□□□ 0.29
DDX56-205ENST00000433257 ADRA2BP18089 450 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 LIFRP42702 1097 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 TTLL5Q6EMB2 1281 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 SHC4Q6S5L8 630 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 ERCC4Q92889 916 aaPredicted RBP16.88■□□□□ 0.29
DDX56-205ENST00000433257 XAGE2Q96GT9 111 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 PANX2Q96RD6 677 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 MAP3K14Q99558 947 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 UBXN6Q9BZV1 441 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 CNNM2Q9H8M5 875 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 PSD3Q9NYI0 1048 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
DDX56-205ENST00000433257 ZBTB43O43298 467 aa16.87■□□□□ 0.29
DDX56-205ENST00000433257 RFC4P35249 363 aa16.87■□□□□ 0.29
DDX56-205ENST00000433257 PLA2G4AP47712 749 aa16.87■□□□□ 0.29
DDX56-205ENST00000433257 MUM1L1Q5H9M0 696 aa16.87■□□□□ 0.29
DDX56-205ENST00000433257 CEP112Q8N8E3 955 aa16.87■□□□□ 0.29
DDX56-205ENST00000433257 CCDC51Q96ER9 411 aa16.87■□□□□ 0.29
DDX56-205ENST00000433257 CTAGE1Q96RT6 745 aa16.87■□□□□ 0.29
DDX56-205ENST00000433257 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.87■□□□□ 0.29
DDX56-205ENST00000433257 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
DDX56-205ENST00000433257 MRFAP1Q9Y605 127 aa16.87■□□□□ 0.29
DDX56-205ENST00000433257 CCDC151A5D8V7 595 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 VWA3AA6NCI4 1184 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 SEMA3EO15041 775 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 IGSF3O75054 1194 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 CHGBP05060 677 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 CCDC175P0C221 793 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 CDK11BP21127 795 aaKnown RBP16.86■□□□□ 0.29
DDX56-205ENST00000433257 IL6STP40189 918 aaPredicted RBP16.86■□□□□ 0.29
DDX56-205ENST00000433257 PPP2R3AQ06190 1150 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 SSRP1Q08945 709 aaKnown RBP16.86■□□□□ 0.29
DDX56-205ENST00000433257 LRRC24Q50LG9 513 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 TAF7LQ5H9L4 462 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 OTUD7BQ6GQQ9 843 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 COL23A1Q86Y22 540 aaPredicted RBP16.86■□□□□ 0.29
DDX56-205ENST00000433257 ISCA1Q9BUE6 129 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 CARD6Q9BX69 1037 aa16.86■□□□□ 0.29
DDX56-205ENST00000433257 IQSEC3Q9UPP2 1182 aaPredicted RBP16.86■□□□□ 0.29
DDX56-205ENST00000433257 A0A087WWV3 80 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 CCDC196A0A1B0GTZ2 297 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 ERLIN1O75477 346 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 UQCRFS1P1P0C7P4 283 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 PPP2R5BQ15173 497 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 CC2D1AQ6P1N0 951 aaPredicted RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 APOA5Q6Q788 366 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 RSRC2Q7L4I2 434 aaKnown RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 TMEM139Q8IV31 216 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 TRIM22Q8IYM9 498 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 TMTC2Q8N394 836 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 SLC16A10Q8TF71 515 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 HNRNPLLQ8WVV9 542 aaKnown RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 SMARCE1Q969G3 411 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDX56-205ENST00000433257 GBP3Q9H0R5 595 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 FOXP1Q9H334 677 aaPredicted RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 COL5A3P25940 1745 aaPredicted RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 ECM29Q5VYK3 1845 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 CDHR2Q9BYE9 1310 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.85■□□□□ 0.29
DDX56-205ENST00000433257 BMP15O95972 392 aa16.85■□□□□ 0.29
DDX56-205ENST00000433257 PCCAP05165 728 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms