RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.24■□□□□ 0.35
CSTF3-202ENST00000431742 KLRG1Q96E93 195 aa17.24■□□□□ 0.35
CSTF3-202ENST00000431742 HHIPL1Q96JK4 782 aa17.24■□□□□ 0.35
CSTF3-202ENST00000431742 ZNF341Q9BYN7 854 aa17.24■□□□□ 0.35
CSTF3-202ENST00000431742 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
CSTF3-202ENST00000431742 HERC5Q9UII4 1024 aaKnown RBP17.24■□□□□ 0.35
CSTF3-202ENST00000431742 ZNF112Q9UJU3 913 aa17.24■□□□□ 0.35
CSTF3-202ENST00000431742 ZMYM6O95789 1325 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 UNCXA6NJT0 531 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 RASSF10A6NK89 507 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 UBE2Q2LH0YL09 131 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 HLA-DOAP06340 250 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 IREB2P48200 963 aaKnown RBP17.23■□□□□ 0.35
CSTF3-202ENST00000431742 PLCD1P51178 756 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 HUNKP57058 714 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 HTRA3P83110 453 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 EVX2Q03828 476 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 TTLL12Q14166 644 aaPredicted RBP17.23■□□□□ 0.35
CSTF3-202ENST00000431742 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 MIGA2Q7L4E1 593 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 TTC6Q86TZ1 520 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 IFNL3Q8IZI9 196 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 DDRGK1Q96HY6 314 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 ARPP21Q9UBL0 812 aaPredicted RBP17.23■□□□□ 0.35
CSTF3-202ENST00000431742 ABT1Q9ULW3 272 aaKnown RBP17.23■□□□□ 0.35
CSTF3-202ENST00000431742 ROBO3Q96MS0 1386 aa17.23■□□□□ 0.35
CSTF3-202ENST00000431742 PHF20L1A8MW92 1017 aa17.22■□□□□ 0.35
CSTF3-202ENST00000431742 USP17L12C9JPN9 530 aa17.22■□□□□ 0.35
CSTF3-202ENST00000431742 USP17L21D6R901 530 aa17.22■□□□□ 0.35
CSTF3-202ENST00000431742 CYP2D6P10635 497 aa17.22■□□□□ 0.35
CSTF3-202ENST00000431742 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
CSTF3-202ENST00000431742 GABPAQ06546 454 aa17.22■□□□□ 0.35
CSTF3-202ENST00000431742 SLC4A8Q2Y0W8 1093 aa17.22■□□□□ 0.35
CSTF3-202ENST00000431742 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
CSTF3-202ENST00000431742 CTR9Q6PD62 1173 aa17.22■□□□□ 0.35
CSTF3-202ENST00000431742 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.22■□□□□ 0.35
CSTF3-202ENST00000431742 FOXP4Q8IVH2 680 aaPredicted RBP17.22■□□□□ 0.35
CSTF3-202ENST00000431742 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
CSTF3-202ENST00000431742 FAM196BA6NMK8 535 aa17.21■□□□□ 0.35
CSTF3-202ENST00000431742 SGSM2O43147 1006 aa17.21■□□□□ 0.35
CSTF3-202ENST00000431742 HSPD1P10809 573 aaKnown RBP17.21■□□□□ 0.35
CSTF3-202ENST00000431742 ALX1Q15699 326 aa17.21■□□□□ 0.35
CSTF3-202ENST00000431742 RUFY2Q8WXA3 655 aa17.21■□□□□ 0.35
CSTF3-202ENST00000431742 NACAP1Q9BZK3 213 aa17.21■□□□□ 0.35
CSTF3-202ENST00000431742 SERPINB13Q9UIV8 391 aa17.21■□□□□ 0.35
CSTF3-202ENST00000431742 CYP2D7A0A087X1C5 515 aa17.2■□□□□ 0.34
CSTF3-202ENST00000431742 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
CSTF3-202ENST00000431742 CDC45O75419 566 aa17.2■□□□□ 0.34
CSTF3-202ENST00000431742 APPP05067 770 aa17.2■□□□□ 0.34
CSTF3-202ENST00000431742 POLR3DP05423 398 aaPredicted RBP17.2■□□□□ 0.34
CSTF3-202ENST00000431742 TDO2P48775 406 aa17.2■□□□□ 0.34
CSTF3-202ENST00000431742 MAP3K9P80192 1104 aa17.2■□□□□ 0.34
CSTF3-202ENST00000431742 ANKRD13AQ8IZ07 590 aa17.2■□□□□ 0.34
CSTF3-202ENST00000431742 CLMNQ96JQ2 1002 aa17.2■□□□□ 0.34
CSTF3-202ENST00000431742 WRNIP1Q96S55 665 aa17.2■□□□□ 0.34
CSTF3-202ENST00000431742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.2■□□□□ 0.34
CSTF3-202ENST00000431742 INPP5BP32019 993 aa17.19■□□□□ 0.34
CSTF3-202ENST00000431742 VGLL4Q14135 290 aa17.19■□□□□ 0.34
CSTF3-202ENST00000431742 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
CSTF3-202ENST00000431742 NOL9Q5SY16 702 aaKnown RBP17.19■□□□□ 0.34
CSTF3-202ENST00000431742 RGMBQ6NW40 437 aa17.19■□□□□ 0.34
CSTF3-202ENST00000431742 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
CSTF3-202ENST00000431742 CRACR2BQ8N4Y2 399 aaPredicted RBP17.19■□□□□ 0.34
CSTF3-202ENST00000431742 ESYT1Q9BSJ8 1104 aa17.19■□□□□ 0.34
CSTF3-202ENST00000431742 DSCC1Q9BVC3 393 aa17.19■□□□□ 0.34
CSTF3-202ENST00000431742 NAPBQ9H115 298 aa17.19■□□□□ 0.34
CSTF3-202ENST00000431742 SNCAIPQ9Y6H5 919 aa17.19■□□□□ 0.34
CSTF3-202ENST00000431742 CEP350Q5VT06 3117 aa17.18■□□□□ 0.34
CSTF3-202ENST00000431742 SHMT1P34896 483 aa17.18■□□□□ 0.34
CSTF3-202ENST00000431742 DEFB115Q30KQ5 88 aa17.18■□□□□ 0.34
CSTF3-202ENST00000431742 TATDN1Q6P1N9 297 aa17.18■□□□□ 0.34
CSTF3-202ENST00000431742 ZKSCAN4Q969J2 545 aaPredicted RBP17.18■□□□□ 0.34
CSTF3-202ENST00000431742 FAM155AB1AL88 458 aaPredicted RBP17.17■□□□□ 0.34
CSTF3-202ENST00000431742 CTNND1O60716 968 aaKnown RBP17.17■□□□□ 0.34
CSTF3-202ENST00000431742 FGAP02671 866 aa17.17■□□□□ 0.34
CSTF3-202ENST00000431742 C16orf86Q6ZW13 317 aa17.17■□□□□ 0.34
CSTF3-202ENST00000431742 RASAL3Q86YV0 1011 aa17.17■□□□□ 0.34
CSTF3-202ENST00000431742 DYNLL2Q96FJ2 89 aa17.17■□□□□ 0.34
CSTF3-202ENST00000431742 TRIM34Q9BYJ4 488 aa17.17■□□□□ 0.34
CSTF3-202ENST00000431742 SWAP70Q9UH65 585 aa17.17■□□□□ 0.34
CSTF3-202ENST00000431742 CSADQ9Y600 493 aa17.17■□□□□ 0.34
CSTF3-202ENST00000431742 LOC285556D6RIA3 1793 aa17.17■□□□□ 0.34
CSTF3-202ENST00000431742 MINDY4BA8MYZ0 360 aa17.16■□□□□ 0.34
CSTF3-202ENST00000431742 SLC10A3P09131 477 aa17.16■□□□□ 0.34
CSTF3-202ENST00000431742 CAP2P40123 477 aa17.16■□□□□ 0.34
CSTF3-202ENST00000431742 PPARAQ07869 468 aa17.16■□□□□ 0.34
CSTF3-202ENST00000431742 SCYL3Q8IZE3 742 aa17.16■□□□□ 0.34
CSTF3-202ENST00000431742 SLC44A5Q8NCS7 719 aa17.16■□□□□ 0.34
CSTF3-202ENST00000431742 ANAPC4Q9UJX5 808 aa17.16■□□□□ 0.34
CSTF3-202ENST00000431742 SPDYE5A6NIY4 337 aa17.15■□□□□ 0.34
CSTF3-202ENST00000431742 ZNF157P51786 506 aaPredicted RBP17.15■□□□□ 0.34
CSTF3-202ENST00000431742 JAG1P78504 1218 aa17.15■□□□□ 0.34
CSTF3-202ENST00000431742 PTH1RQ03431 593 aa17.15■□□□□ 0.34
CSTF3-202ENST00000431742 CYP4F22Q6NT55 531 aa17.15■□□□□ 0.34
CSTF3-202ENST00000431742 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
CSTF3-202ENST00000431742 DNAJC5GQ8N7S2 189 aa17.15■□□□□ 0.34
CSTF3-202ENST00000431742 CAPNS2Q96L46 248 aa17.15■□□□□ 0.34
CSTF3-202ENST00000431742 ELP3Q9H9T3 547 aa17.15■□□□□ 0.34
CSTF3-202ENST00000431742 MYH4Q9Y623 1939 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms