RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.34
LAMA4-208ENST00000431543 IRF6O14896 467 aa17.2■□□□□ 0.34
LAMA4-208ENST00000431543 TBC1D12O60347 775 aa17.2■□□□□ 0.34
LAMA4-208ENST00000431543 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
LAMA4-208ENST00000431543 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
LAMA4-208ENST00000431543 IFNL1Q8IU54 200 aa17.2■□□□□ 0.34
LAMA4-208ENST00000431543 SAGE1Q9NXZ1 904 aa17.2■□□□□ 0.34
LAMA4-208ENST00000431543 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.2■□□□□ 0.34
LAMA4-208ENST00000431543 COL2A1P02458 1487 aaPredicted RBP17.19■□□□□ 0.34
LAMA4-208ENST00000431543 TESPA1A2RU30 521 aaPredicted RBP17.19■□□□□ 0.34
LAMA4-208ENST00000431543 TRIM6-TRIM34B2RNG4 842 aa17.19■□□□□ 0.34
LAMA4-208ENST00000431543 USP5P45974 858 aa17.19■□□□□ 0.34
LAMA4-208ENST00000431543 INHBEP58166 350 aa17.19■□□□□ 0.34
LAMA4-208ENST00000431543 NOL9Q5SY16 702 aaKnown RBP17.19■□□□□ 0.34
LAMA4-208ENST00000431543 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
LAMA4-208ENST00000431543 LCORLQ8N3X6 602 aa17.19■□□□□ 0.34
LAMA4-208ENST00000431543 BRI3BPQ8WY22 251 aa17.19■□□□□ 0.34
LAMA4-208ENST00000431543 ARMT1Q9H993 441 aa17.19■□□□□ 0.34
LAMA4-208ENST00000431543 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
LAMA4-208ENST00000431543 FOCADQ5VW36 1801 aa17.19■□□□□ 0.34
LAMA4-208ENST00000431543 PRKAB2O43741 272 aa17.18■□□□□ 0.34
LAMA4-208ENST00000431543 BMP2KLQ5H9B9 411 aa17.18■□□□□ 0.34
LAMA4-208ENST00000431543 CCDC84Q86UT8 332 aaPredicted RBP17.18■□□□□ 0.34
LAMA4-208ENST00000431543 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
LAMA4-208ENST00000431543 KBTBD3Q8NAB2 608 aa17.18■□□□□ 0.34
LAMA4-208ENST00000431543 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.18■□□□□ 0.34
LAMA4-208ENST00000431543 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
LAMA4-208ENST00000431543 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
LAMA4-208ENST00000431543 CASP8AP2Q9UKL3 1982 aa17.18■□□□□ 0.34
LAMA4-208ENST00000431543 SIPA1L1O43166 1804 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 CCL15-CCL14A0A0B4J2E2 113 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 CTNND1O60716 968 aaKnown RBP17.17■□□□□ 0.34
LAMA4-208ENST00000431543 MBD4O95243 580 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 PTPRAP18433 802 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 GTF2A2P52657 109 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 JAG1P78504 1218 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 EVX2Q03828 476 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 PPATQ06203 517 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 PPIL2Q13356 520 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 UBE3CQ15386 1083 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 CCL15Q16663 113 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 LRRFIP1Q32MZ4 808 aaKnown RBP17.17■□□□□ 0.34
LAMA4-208ENST00000431543 CERS3Q8IU89 383 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 SCYL3Q8IZE3 742 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 SDR42E1Q8WUS8 393 aa17.17■□□□□ 0.34
LAMA4-208ENST00000431543 PUS7LQ9H0K6 701 aaKnown RBP17.17■□□□□ 0.34
LAMA4-208ENST00000431543 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
LAMA4-208ENST00000431543 METTL16Q86W50 562 aaKnown RBP17.16■□□□□ 0.34
LAMA4-208ENST00000431543 FOXP4Q8IVH2 680 aaPredicted RBP17.16■□□□□ 0.34
LAMA4-208ENST00000431543 RILPL2Q969X0 211 aa17.16■□□□□ 0.34
LAMA4-208ENST00000431543 EVI5LQ96CN4 794 aa17.16■□□□□ 0.34
LAMA4-208ENST00000431543 CRNKL1Q9BZJ0 848 aaKnown RBP17.16■□□□□ 0.34
LAMA4-208ENST00000431543 ZHX2Q9Y6X8 837 aa17.16■□□□□ 0.34
LAMA4-208ENST00000431543 LAMB1P07942 1786 aa17.15■□□□□ 0.34
LAMA4-208ENST00000431543 PLCD1P51178 756 aa17.15■□□□□ 0.34
LAMA4-208ENST00000431543 SNAPC2Q13487 334 aa17.15■□□□□ 0.34
LAMA4-208ENST00000431543 ZSCAN25Q6NSZ9 544 aa17.15■□□□□ 0.34
LAMA4-208ENST00000431543 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
LAMA4-208ENST00000431543 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
LAMA4-208ENST00000431543 PICK1Q9NRD5 415 aa17.15■□□□□ 0.34
LAMA4-208ENST00000431543 HERC5Q9UII4 1024 aaKnown RBP17.15■□□□□ 0.34
LAMA4-208ENST00000431543 MYH1P12882 1939 aa17.15■□□□□ 0.34
LAMA4-208ENST00000431543 MYH7P12883 1935 aa17.14■□□□□ 0.33
LAMA4-208ENST00000431543 RNF113AO15541 343 aaKnown RBP17.14■□□□□ 0.33
LAMA4-208ENST00000431543 EIF5BO60841 1220 aaKnown RBP17.14■□□□□ 0.33
LAMA4-208ENST00000431543 CYP2D6P10635 497 aa17.14■□□□□ 0.33
LAMA4-208ENST00000431543 CAP2P40123 477 aa17.14■□□□□ 0.33
LAMA4-208ENST00000431543 MOGSQ13724 837 aa17.14■□□□□ 0.33
LAMA4-208ENST00000431543 TICAM2Q86XR7 235 aa17.14■□□□□ 0.33
LAMA4-208ENST00000431543 TNS4Q8IZW8 715 aa17.14■□□□□ 0.33
LAMA4-208ENST00000431543 CRACR2BQ8N4Y2 399 aaPredicted RBP17.14■□□□□ 0.33
LAMA4-208ENST00000431543 OSBP2Q969R2 916 aa17.14■□□□□ 0.33
LAMA4-208ENST00000431543 DCP1AQ9NPI6 582 aaPredicted RBP17.14■□□□□ 0.33
LAMA4-208ENST00000431543 KCNH4Q9UQ05 1017 aa17.14■□□□□ 0.33
LAMA4-208ENST00000431543 AFG3L2Q9Y4W6 797 aa17.14■□□□□ 0.33
LAMA4-208ENST00000431543 BTBD19C9JJ37 291 aa17.13■□□□□ 0.33
LAMA4-208ENST00000431543 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
LAMA4-208ENST00000431543 ALDH1A1P00352 501 aa17.13■□□□□ 0.33
LAMA4-208ENST00000431543 HLA-DOAP06340 250 aa17.13■□□□□ 0.33
LAMA4-208ENST00000431543 CETPP11597 493 aa17.13■□□□□ 0.33
LAMA4-208ENST00000431543 CRHR2Q13324 411 aa17.13■□□□□ 0.33
LAMA4-208ENST00000431543 CFHR5Q9BXR6 569 aa17.13■□□□□ 0.33
LAMA4-208ENST00000431543 MCM9Q9NXL9 1143 aa17.13■□□□□ 0.33
LAMA4-208ENST00000431543 GPR25O00155 361 aa17.12■□□□□ 0.33
LAMA4-208ENST00000431543 HIP1O00291 1037 aa17.12■□□□□ 0.33
LAMA4-208ENST00000431543 GDF11O95390 407 aa17.12■□□□□ 0.33
LAMA4-208ENST00000431543 POLR3DP05423 398 aaPredicted RBP17.12■□□□□ 0.33
LAMA4-208ENST00000431543 SDSP20132 328 aa17.12■□□□□ 0.33
LAMA4-208ENST00000431543 OTUD7BQ6GQQ9 843 aa17.12■□□□□ 0.33
LAMA4-208ENST00000431543 TTC6Q86TZ1 520 aa17.12■□□□□ 0.33
LAMA4-208ENST00000431543 ZNF296Q8WUU4 475 aaPredicted RBP17.12■□□□□ 0.33
LAMA4-208ENST00000431543 STRBPQ96SI9 672 aaKnown RBP17.12■□□□□ 0.33
LAMA4-208ENST00000431543 SEC62Q99442 399 aaKnown RBP17.12■□□□□ 0.33
LAMA4-208ENST00000431543 TRIM34Q9BYJ4 488 aa17.12■□□□□ 0.33
LAMA4-208ENST00000431543 CYP2D7A0A087X1C5 515 aa17.11■□□□□ 0.33
LAMA4-208ENST00000431543 TRIM75PA6NK02 468 aa17.11■□□□□ 0.33
LAMA4-208ENST00000431543 M0R2C6 588 aa17.11■□□□□ 0.33
LAMA4-208ENST00000431543 CXCL11O14625 94 aa17.11■□□□□ 0.33
LAMA4-208ENST00000431543 GSPT1P15170 499 aaKnown RBP17.11■□□□□ 0.33
LAMA4-208ENST00000431543 TATDN1Q6P1N9 297 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms