RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
CHD4-202ENST00000430771 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
CHD4-202ENST00000430771 DOCK1Q14185 1865 aa13.08□□□□□ -0.32
CHD4-202ENST00000430771 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
CHD4-202ENST00000430771 ZNF213O14771 459 aa13.08□□□□□ -0.32
CHD4-202ENST00000430771 PCP11498 1178 aaKnown RBP13.08□□□□□ -0.32
CHD4-202ENST00000430771 PDE4BQ07343 736 aa13.08□□□□□ -0.32
CHD4-202ENST00000430771 SH3BP5LQ7L8J4 393 aa13.08□□□□□ -0.32
CHD4-202ENST00000430771 ZFPM1Q8IX07 1006 aa13.08□□□□□ -0.32
CHD4-202ENST00000430771 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.32
CHD4-202ENST00000430771 ATAD5Q96QE3 1844 aa13.08□□□□□ -0.32
CHD4-202ENST00000430771 TBC1D12O60347 775 aa13.07□□□□□ -0.32
CHD4-202ENST00000430771 CYP2D6P10635 497 aa13.07□□□□□ -0.32
CHD4-202ENST00000430771 NT5C2P49902 561 aa13.07□□□□□ -0.32
CHD4-202ENST00000430771 FSTL1Q12841 308 aa13.07□□□□□ -0.32
CHD4-202ENST00000430771 FOXP4Q8IVH2 680 aaPredicted RBP13.07□□□□□ -0.32
CHD4-202ENST00000430771 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
CHD4-202ENST00000430771 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
CHD4-202ENST00000430771 CYP2D7A0A087X1C5 515 aa13.06□□□□□ -0.32
CHD4-202ENST00000430771 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
CHD4-202ENST00000430771 ZKSCAN1P17029 563 aaPredicted RBP13.06□□□□□ -0.32
CHD4-202ENST00000430771 PLCD1P51178 756 aa13.06□□□□□ -0.32
CHD4-202ENST00000430771 HAND2P61296 217 aa13.06□□□□□ -0.32
CHD4-202ENST00000430771 NBPF12Q5TAG4 269 aaPredicted RBP13.06□□□□□ -0.32
CHD4-202ENST00000430771 C16orf86Q6ZW13 317 aa13.06□□□□□ -0.32
CHD4-202ENST00000430771 CDAN1Q8IWY9 1227 aa13.06□□□□□ -0.32
CHD4-202ENST00000430771 STAG1Q8WVM7 1258 aa13.06□□□□□ -0.32
CHD4-202ENST00000430771 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHD4-202ENST00000430771 TRAF5O00463 557 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 SLC27A2O14975 620 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 CYP21A2P08686 494 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 HSPA4P34932 840 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 IREB2P48200 963 aaKnown RBP13.05□□□□□ -0.32
CHD4-202ENST00000430771 FKBP1BP68106 108 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 GABPAQ06546 454 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
CHD4-202ENST00000430771 PRAMEF18Q5VWM3 479 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 CREB3L3Q68CJ9 461 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 ARMC9Q7Z3E5 817 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 METTL16Q86W50 562 aaKnown RBP13.05□□□□□ -0.32
CHD4-202ENST00000430771 BACH2Q9BYV9 841 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 CNNM2Q9H8M5 875 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 ZNF408Q9H9D4 720 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 PASKQ96RG2 1323 aa13.05□□□□□ -0.32
CHD4-202ENST00000430771 GREB1LQ9C091 1923 aaPredicted RBP13.04□□□□□ -0.32
CHD4-202ENST00000430771 CELF2O95319 508 aaKnown RBP13.04□□□□□ -0.32
CHD4-202ENST00000430771 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
CHD4-202ENST00000430771 CTDSPL2Q05D32 466 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 TRDNQ13061 729 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 KRT32Q14532 448 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 NECTIN1Q15223 517 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 MFSD6Q6ZSS7 791 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 RALYLQ86SE5 291 aaKnown RBP13.04□□□□□ -0.32
CHD4-202ENST00000430771 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 DYNLL2Q96FJ2 89 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 USP26Q9BXU7 913 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 DNAJC18Q9H819 358 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 GBA2Q9HCG7 927 aaPredicted RBP13.04□□□□□ -0.32
CHD4-202ENST00000430771 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
CHD4-202ENST00000430771 FAM196BA6NMK8 535 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 ORC4O43929 436 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 SHMT1P34896 483 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 CDK8P49336 464 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 MAP3K10Q02779 954 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 C2orf69Q8N8R5 385 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 SLC44A5Q8NCS7 719 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 CCDC17Q96LX7 622 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 WRNIP1Q96S55 665 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 KRT23Q9C075 422 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 ANGEL1Q9UNK9 670 aaKnown RBP13.03□□□□□ -0.32
CHD4-202ENST00000430771 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHD4-202ENST00000430771 NEDD4P46934 1319 aa13.03□□□□□ -0.32
CHD4-202ENST00000430771 FGRP09769 529 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 ANAPC15P60006 121 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 EVX2Q03828 476 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 MAP3K11Q16584 847 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 TATDN1Q6P1N9 297 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 STK11IPQ8N1F8 1099 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 NCOA7Q8NI08 942 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 ESR2Q92731 530 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 NBPF3Q9H094 633 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 GINM1Q9NU53 330 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 CSADQ9Y600 493 aa13.02□□□□□ -0.33
CHD4-202ENST00000430771 UNCXA6NJT0 531 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 TSPY2A6NKD2 308 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 E7EWF7 191 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 PRDM1O75626 825 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 SEC24BO95487 1268 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 TSPY3P0CV98 308 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 TSPY8P0CW00 308 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 PRKG1Q13976 671 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
CHD4-202ENST00000430771 RRP12Q5JTH9 1297 aaKnown RBP13.01□□□□□ -0.33
CHD4-202ENST00000430771 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 NOL9Q5SY16 702 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms